RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 LINC01600Q96MT4 127 aa8.89□□□□□ -0.99
TCF4-248ENST00000616053 AVPP01185 164 aa8.89□□□□□ -0.99
TCF4-248ENST00000616053 C10orf91Q5T1B1 145 aa8.88□□□□□ -0.99
TCF4-248ENST00000616053 A0A087WVE0 104 aa8.87□□□□□ -0.99
TCF4-248ENST00000616053 LINC00167Q96N53 147 aa8.87□□□□□ -0.99
TCF4-248ENST00000616053 SMIM1B2RUZ4 78 aa8.87□□□□□ -0.99
TCF4-248ENST00000616053 PRR9Q5T870 116 aa8.87□□□□□ -0.99
TCF4-248ENST00000616053 SMIM29Q86T20 159 aa8.87□□□□□ -0.99
TCF4-248ENST00000616053 CXCL6P80162 114 aa8.87□□□□□ -0.99
TCF4-248ENST00000616053 LINC00694P0DN24 101 aa8.86□□□□□ -0.99
TCF4-248ENST00000616053 ZNF575Q86XF7 245 aa8.86□□□□□ -0.99
TCF4-248ENST00000616053 LINC00483Q53H64 154 aa8.86□□□□□ -0.99
TCF4-248ENST00000616053 CAMK2N1Q7Z7J9 78 aa8.86□□□□□ -0.99
TCF4-248ENST00000616053 A0A1B0GUV1 79 aa8.86□□□□□ -0.99
TCF4-248ENST00000616053 CRIP1P50238 77 aa8.84□□□□□ -0.99
TCF4-248ENST00000616053 TP73-AS1Q9UF72 201 aa8.84□□□□□ -0.99
TCF4-248ENST00000616053 LINC00574Q9H8X3 128 aa8.84□□□□□ -0.99
TCF4-248ENST00000616053 CCDC179H3BU77 68 aa8.83□□□□□ -1
TCF4-248ENST00000616053 LTBP1Q14766 1721 aa8.83□□□□□ -1
TCF4-248ENST00000616053 USP9XQ93008 2570 aaPredicted RBP8.83□□□□□ -1
TCF4-248ENST00000616053 POLR2KP53803 58 aaKnown RBP8.83□□□□□ -1
TCF4-248ENST00000616053 A0A0D9SG42 100 aa8.82□□□□□ -1
TCF4-248ENST00000616053 OBSCN-AS1Q96MR7 158 aa8.81□□□□□ -1
TCF4-248ENST00000616053 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
TCF4-248ENST00000616053 Q6ZSA8 131 aa8.8□□□□□ -1
TCF4-248ENST00000616053 KRTAP24-1Q3LI83 254 aa8.79□□□□□ -1
TCF4-248ENST00000616053 IGLV5-48A0A075B6I7 105 aa8.79□□□□□ -1
TCF4-248ENST00000616053 BCE1O60756 84 aa8.79□□□□□ -1
TCF4-248ENST00000616053 PKD1L2Q7Z442 2459 aa8.79□□□□□ -1
TCF4-248ENST00000616053 ST20-AS1Q8NBB2 130 aa8.78□□□□□ -1
TCF4-248ENST00000616053 C11orf1Q9H5F2 150 aa8.77□□□□□ -1
TCF4-248ENST00000616053 NCOR2Q9Y618 2525 aa8.77□□□□□ -1.01
TCF4-248ENST00000616053 Q6ZQT0 140 aa8.77□□□□□ -1.01
TCF4-248ENST00000616053 LINC01561Q8N1V8 128 aa8.77□□□□□ -1.01
TCF4-248ENST00000616053 ABCA12Q86UK0 2595 aa8.76□□□□□ -1.01
TCF4-248ENST00000616053 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
TCF4-248ENST00000616053 IGHV3OR16-9A0A0B4J2B5 98 aa8.76□□□□□ -1.01
TCF4-248ENST00000616053 LOC101927531A0A1B0GV80 90 aa8.75□□□□□ -1.01
TCF4-248ENST00000616053 LINC00476Q8WZB0 136 aa8.75□□□□□ -1.01
TCF4-248ENST00000616053 C11orf21Q9P2W6 132 aa8.75□□□□□ -1.01
TCF4-248ENST00000616053 TM2D3Q9BRN9 247 aa8.73□□□□□ -1.01
TCF4-248ENST00000616053 CDSNQ15517 529 aa8.73□□□□□ -1.01
TCF4-248ENST00000616053 UQCR11O14957 56 aa8.72□□□□□ -1.01
TCF4-248ENST00000616053 DSCR10P59022 87 aa8.72□□□□□ -1.01
TCF4-248ENST00000616053 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
TCF4-248ENST00000616053 K7EQZ3 153 aa8.71□□□□□ -1.02
TCF4-248ENST00000616053 CHD8Q9HCK8 2581 aa8.7□□□□□ -1.02
TCF4-248ENST00000616053 H3BPC8 53 aa8.7□□□□□ -1.02
TCF4-248ENST00000616053 ZNF295-AS1Q8N0V1 137 aa8.7□□□□□ -1.02
TCF4-248ENST00000616053 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
TCF4-248ENST00000616053 LINC00588Q9Y4M8 146 aa8.69□□□□□ -1.02
TCF4-248ENST00000616053 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
TCF4-248ENST00000616053 MRPL34Q9BQ48 92 aaKnown RBP8.68□□□□□ -1.02
TCF4-248ENST00000616053 MTORP42345 2549 aa8.68□□□□□ -1.02
TCF4-248ENST00000616053 IGLV5-45A0A087WSX0 123 aa8.67□□□□□ -1.02
TCF4-248ENST00000616053 PSORS1C2Q9UIG4 136 aa8.67□□□□□ -1.02
TCF4-248ENST00000616053 C2orf91Q6ZV80 131 aa8.66□□□□□ -1.02
TCF4-248ENST00000616053 Q6ZRX8 168 aa8.66□□□□□ -1.02
TCF4-248ENST00000616053 H3BNG1 76 aa8.66□□□□□ -1.02
TCF4-248ENST00000616053 ADAMTSL4-AS1Q5T5F5 129 aa8.65□□□□□ -1.02
TCF4-248ENST00000616053 GAS8-AS1O95177 125 aa8.65□□□□□ -1.03
TCF4-248ENST00000616053 PRRC2CQ9Y520 2896 aaKnown RBP8.64□□□□□ -1.03
TCF4-248ENST00000616053 C11orf72Q8NBR9 251 aa8.64□□□□□ -1.03
TCF4-248ENST00000616053 TLX1NBP0CAT3 122 aa8.64□□□□□ -1.03
TCF4-248ENST00000616053 MIR22HGQ0VDD5 57 aa8.64□□□□□ -1.03
TCF4-248ENST00000616053 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
TCF4-248ENST00000616053 POLQO75417 2590 aa8.63□□□□□ -1.03
TCF4-248ENST00000616053 LINC00846Q9NV44 126 aa8.63□□□□□ -1.03
TCF4-248ENST00000616053 IGLV1-50A0A075B6I6 118 aa8.62□□□□□ -1.03
TCF4-248ENST00000616053 PRO3102Q9H379 93 aa8.61□□□□□ -1.03
TCF4-248ENST00000616053 IGF2RP11717 2491 aa8.61□□□□□ -1.03
TCF4-248ENST00000616053 AMELXQ99217 191 aa8.61□□□□□ -1.03
TCF4-248ENST00000616053 A0A1B0GW54 56 aa8.61□□□□□ -1.03
TCF4-248ENST00000616053 HRES1P13985 223 aa8.61□□□□□ -1.03
TCF4-248ENST00000616053 PIEZO2Q9H5I5 2752 aa8.6□□□□□ -1.03
TCF4-248ENST00000616053 A8MWP4 228 aa8.6□□□□□ -1.03
TCF4-248ENST00000616053 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
TCF4-248ENST00000616053 ZNF580Q9UK33 172 aa8.59□□□□□ -1.03
TCF4-248ENST00000616053 C9orf163Q8N9P6 203 aa8.58□□□□□ -1.04
TCF4-248ENST00000616053 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
TCF4-248ENST00000616053 IGLV7-46A0A075B6I9 117 aa8.58□□□□□ -1.04
TCF4-248ENST00000616053 ELOF1P60002 83 aaKnown RBP8.58□□□□□ -1.04
TCF4-248ENST00000616053 ZNF861PO60384 105 aa8.57□□□□□ -1.04
TCF4-248ENST00000616053 TSPEAR-AS2P59090 65 aa8.56□□□□□ -1.04
TCF4-248ENST00000616053 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
TCF4-248ENST00000616053 COA5Q86WW8 74 aa8.54□□□□□ -1.04
TCF4-248ENST00000616053 BPTFQ12830 3046 aa8.54□□□□□ -1.04
TCF4-248ENST00000616053 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
TCF4-248ENST00000616053 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
TCF4-248ENST00000616053 SETD2Q9BYW2 2564 aaPredicted RBP8.53□□□□□ -1.04
TCF4-248ENST00000616053 Q8N1X5 172 aa8.52□□□□□ -1.05
TCF4-248ENST00000616053 TRBV7-4A0A0J9YYF1 115 aa8.52□□□□□ -1.05
TCF4-248ENST00000616053 Q5VSD8 79 aa8.52□□□□□ -1.05
TCF4-248ENST00000616053 GVQW2A0A096LPI5 108 aaPredicted RBP8.51□□□□□ -1.05
TCF4-248ENST00000616053 EP400Q96L91 3159 aa8.51□□□□□ -1.05
TCF4-248ENST00000616053 A0A087WTM6 91 aa8.5□□□□□ -1.05
TCF4-248ENST00000616053 ERC2-IT1O76042 136 aa8.5□□□□□ -1.05
TCF4-248ENST00000616053 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
TCF4-248ENST00000616053 SPTBN4Q9H254 2564 aa8.48□□□□□ -1.05
TCF4-248ENST00000616053 PRO0628Q9UI54 55 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms