RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 Q6ZVH6 145 aa5.48□□□□□ -1.53
PSMB3-208ENST00000613870 CEND1Q8N111 149 aa5.48□□□□□ -1.53
PSMB3-208ENST00000613870 Q8N814 137 aa5.48□□□□□ -1.53
PSMB3-208ENST00000613870 SPANXDQ9BXN6 97 aa5.48□□□□□ -1.53
PSMB3-208ENST00000613870 SPANXCQ9NY87 97 aa5.48□□□□□ -1.53
PSMB3-208ENST00000613870 GAGE2DQ9UEU5 116 aa5.48□□□□□ -1.53
PSMB3-208ENST00000613870 IFITM1P13164 125 aa5.47□□□□□ -1.53
PSMB3-208ENST00000613870 RPL24P83731 157 aaKnown RBP5.47□□□□□ -1.53
PSMB3-208ENST00000613870 GAGE2BQ13066 116 aa5.47□□□□□ -1.53
PSMB3-208ENST00000613870 LINC00308Q8TCZ7 52 aa5.47□□□□□ -1.53
PSMB3-208ENST00000613870 LITAFQ99732 161 aa5.47□□□□□ -1.53
PSMB3-208ENST00000613870 LOC107984640A0A0U1RRK4 108 aa5.46□□□□□ -1.54
PSMB3-208ENST00000613870 NDUFC2-KCTD14E9PQ53 114 aa5.46□□□□□ -1.54
PSMB3-208ENST00000613870 SLPIP03973 132 aa5.46□□□□□ -1.54
PSMB3-208ENST00000613870 RNF151Q2KHN1 245 aa5.46□□□□□ -1.54
PSMB3-208ENST00000613870 BVES-AS1Q5T3Y7 98 aa5.46□□□□□ -1.54
PSMB3-208ENST00000613870 SND1-IT1Q9HBX3 110 aa5.46□□□□□ -1.54
PSMB3-208ENST00000613870 XAGE1AQ9HD64 81 aa5.46□□□□□ -1.54
PSMB3-208ENST00000613870 IGLV5-52A0A0A0MRZ9 124 aa5.45□□□□□ -1.54
PSMB3-208ENST00000613870 A4D1N5 150 aa5.45□□□□□ -1.54
PSMB3-208ENST00000613870 A6NDN8 102 aa5.45□□□□□ -1.54
PSMB3-208ENST00000613870 FXYD2P54710 66 aa5.45□□□□□ -1.54
PSMB3-208ENST00000613870 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
PSMB3-208ENST00000613870 RAB37Q96AX2 223 aa5.45□□□□□ -1.54
PSMB3-208ENST00000613870 DPH3Q96FX2 82 aa5.45□□□□□ -1.54
PSMB3-208ENST00000613870 NHP2Q9NX24 153 aaKnown RBP5.45□□□□□ -1.54
PSMB3-208ENST00000613870 PKIGQ9Y2B9 76 aa5.45□□□□□ -1.54
PSMB3-208ENST00000613870 DNAH8Q96JB1 4490 aa5.44□□□□□ -1.54
PSMB3-208ENST00000613870 FUSP35637 526 aaKnown RBP eCLIP5.44□□□□□ -1.54
PSMB3-208ENST00000613870 IGKV2-24A0A0C4DH68 120 aa5.43□□□□□ -1.54
PSMB3-208ENST00000613870 C16orf90A8MZG2 172 aa5.43□□□□□ -1.54
PSMB3-208ENST00000613870 LINC01620Q4KN68 170 aa5.43□□□□□ -1.54
PSMB3-208ENST00000613870 SOSTDC1Q6X4U4 206 aa5.43□□□□□ -1.54
PSMB3-208ENST00000613870 Q6ZRP5 223 aa5.43□□□□□ -1.54
PSMB3-208ENST00000613870 SNHG12Q9BXW3 62 aa5.43□□□□□ -1.54
PSMB3-208ENST00000613870 H7C2G1 150 aa5.42□□□□□ -1.54
PSMB3-208ENST00000613870 K7ERJ3 54 aa5.42□□□□□ -1.54
PSMB3-208ENST00000613870 EIF4EBP3O60516 100 aaPredicted RBP5.42□□□□□ -1.54
PSMB3-208ENST00000613870 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
PSMB3-208ENST00000613870 COL5A1-AS1Q5SY13 56 aa5.42□□□□□ -1.54
PSMB3-208ENST00000613870 C9orf163Q8N9P6 203 aa5.42□□□□□ -1.54
PSMB3-208ENST00000613870 OR13C6PQ8NH95 151 aa5.42□□□□□ -1.54
PSMB3-208ENST00000613870 NCR3O14931 201 aa5.41□□□□□ -1.54
PSMB3-208ENST00000613870 TLX1NBP0CAT3 122 aa5.41□□□□□ -1.54
PSMB3-208ENST00000613870 Q1RN00 199 aa5.41□□□□□ -1.54
PSMB3-208ENST00000613870 NKAPP1Q8N9T2 125 aa5.41□□□□□ -1.54
PSMB3-208ENST00000613870 KRTAP4-5Q9BYR2 181 aa5.41□□□□□ -1.54
PSMB3-208ENST00000613870 FAT1Q14517 4588 aa5.41□□□□□ -1.54
PSMB3-208ENST00000613870 CDK2AP2O75956 126 aa5.4□□□□□ -1.54
PSMB3-208ENST00000613870 CFC1BP0CG36 223 aa5.4□□□□□ -1.54
PSMB3-208ENST00000613870 CFC1P0CG37 223 aa5.4□□□□□ -1.54
PSMB3-208ENST00000613870 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
PSMB3-208ENST00000613870 S100A7L2Q5SY68 101 aa5.4□□□□□ -1.54
PSMB3-208ENST00000613870 FAM19A5Q7Z5A7 132 aaPredicted RBP5.4□□□□□ -1.54
PSMB3-208ENST00000613870 VPS13BQ7Z7G8 4022 aa5.39□□□□□ -1.55
PSMB3-208ENST00000613870 A0A096LNI7 61 aa5.39□□□□□ -1.55
PSMB3-208ENST00000613870 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
PSMB3-208ENST00000613870 CHTF8P0CG12 524 aa5.39□□□□□ -1.55
PSMB3-208ENST00000613870 RPL13AP40429 203 aaKnown RBP5.39□□□□□ -1.55
PSMB3-208ENST00000613870 C9orf129Q5T035 196 aaKnown RBP5.39□□□□□ -1.55
PSMB3-208ENST00000613870 PGPEP1Q9NXJ5 209 aa5.39□□□□□ -1.55
PSMB3-208ENST00000613870 PRO1854Q9UHT4 67 aa5.39□□□□□ -1.55
PSMB3-208ENST00000613870 A0A0B4J2C4 111 aa5.38□□□□□ -1.55
PSMB3-208ENST00000613870 GAGE10A6NGK3 116 aa5.38□□□□□ -1.55
PSMB3-208ENST00000613870 NDUFC2O95298 119 aa5.38□□□□□ -1.55
PSMB3-208ENST00000613870 PSMB2P49721 201 aa5.38□□□□□ -1.55
PSMB3-208ENST00000613870 SDIM1Q6ZPB5 146 aa5.38□□□□□ -1.55
PSMB3-208ENST00000613870 PPDPFQ9H3Y8 114 aa5.38□□□□□ -1.55
PSMB3-208ENST00000613870 LINC00474Q9P2X8 69 aa5.38□□□□□ -1.55
PSMB3-208ENST00000613870 LOC107984156A0A0G2JMH3 177 aa5.37□□□□□ -1.55
PSMB3-208ENST00000613870 FAM168BA1KXE4 195 aa5.37□□□□□ -1.55
PSMB3-208ENST00000613870 M0R378 163 aa5.37□□□□□ -1.55
PSMB3-208ENST00000613870 PCP4P48539 62 aa5.37□□□□□ -1.55
PSMB3-208ENST00000613870 SERTAD4-AS1Q5TG53 156 aa5.37□□□□□ -1.55
PSMB3-208ENST00000613870 ARL17AQ8IVW1 177 aa5.37□□□□□ -1.55
PSMB3-208ENST00000613870 NAA38Q9BRA0 125 aaKnown RBP5.37□□□□□ -1.55
PSMB3-208ENST00000613870 IGKV2-28A0A075B6P5 120 aa5.36□□□□□ -1.55
PSMB3-208ENST00000613870 A0A1B0GWB2 263 aa5.36□□□□□ -1.55
PSMB3-208ENST00000613870 IGKV2D-28P01615 120 aa5.36□□□□□ -1.55
PSMB3-208ENST00000613870 VPREB1P12018 145 aa5.36□□□□□ -1.55
PSMB3-208ENST00000613870 Q8NDZ9 215 aa5.36□□□□□ -1.55
PSMB3-208ENST00000613870 TRBV10-2A0A0K0K1G8 114 aa5.35□□□□□ -1.55
PSMB3-208ENST00000613870 M0QXV9 152 aa5.35□□□□□ -1.55
PSMB3-208ENST00000613870 SCGB1C2P0DMR2 95 aa5.35□□□□□ -1.55
PSMB3-208ENST00000613870 LINC00337Q8N6G1 96 aa5.35□□□□□ -1.55
PSMB3-208ENST00000613870 TMEM126AQ9H061 195 aa5.35□□□□□ -1.55
PSMB3-208ENST00000613870 PLA2G2DQ9UNK4 145 aa5.35□□□□□ -1.55
PSMB3-208ENST00000613870 C22orf24Q9Y442 160 aa5.35□□□□□ -1.55
PSMB3-208ENST00000613870 A0A1W2PNN7 141 aa5.34□□□□□ -1.55
PSMB3-208ENST00000613870 C9orf118A6NHY6 69 aa5.34□□□□□ -1.55
PSMB3-208ENST00000613870 H3BUT2 72 aa5.34□□□□□ -1.55
PSMB3-208ENST00000613870 TAX1BP3O14907 124 aa5.34□□□□□ -1.55
PSMB3-208ENST00000613870 TSPAN13O95857 204 aa5.34□□□□□ -1.55
PSMB3-208ENST00000613870 UBE2BP63146 152 aa5.34□□□□□ -1.55
PSMB3-208ENST00000613870 Q8N1X5 172 aa5.34□□□□□ -1.55
PSMB3-208ENST00000613870 TRBV10-3A0A0K0K1G6 114 aa5.33□□□□□ -1.56
PSMB3-208ENST00000613870 RPL37AP8A6NKH3 93 aa5.33□□□□□ -1.56
PSMB3-208ENST00000613870 COX6CP09669 75 aa5.33□□□□□ -1.56
PSMB3-208ENST00000613870 XGP55808 180 aa5.33□□□□□ -1.56
PSMB3-208ENST00000613870 KRTAP10-1P60331 282 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms