RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 HIGD2BQ4VC39 106 aa5.9□□□□□ -1.46
CCDC47-207ENST00000612558 C10orf25Q5T742 122 aa5.9□□□□□ -1.46
CCDC47-207ENST00000612558 MUC7Q8TAX7 377 aa5.9□□□□□ -1.46
CCDC47-207ENST00000612558 C2orf48Q96LS8 159 aa5.9□□□□□ -1.46
CCDC47-207ENST00000612558 TENM2Q9NT68 2774 aa5.9□□□□□ -1.47
CCDC47-207ENST00000612558 LOC107984156A0A0G2JMH3 177 aa5.89□□□□□ -1.47
CCDC47-207ENST00000612558 TRBV30A0A0K0K1B3 111 aa5.89□□□□□ -1.47
CCDC47-207ENST00000612558 TSPAN13O95857 204 aa5.89□□□□□ -1.47
CCDC47-207ENST00000612558 ARL17AQ8IVW1 177 aa5.89□□□□□ -1.47
CCDC47-207ENST00000612558 CAMK2N2Q96S95 79 aa5.89□□□□□ -1.47
CCDC47-207ENST00000612558 UBE2V1Q13404 147 aa5.89□□□□□ -1.47
CCDC47-207ENST00000612558 C9orf116Q5BN46 136 aaPredicted RBP5.89□□□□□ -1.47
CCDC47-207ENST00000612558 KRTAP1-5Q9BYS1 174 aa5.89□□□□□ -1.47
CCDC47-207ENST00000612558 SND1-IT1Q9HBX3 110 aa5.89□□□□□ -1.47
CCDC47-207ENST00000612558 VPS13DQ5THJ4 4388 aa5.88□□□□□ -1.47
CCDC47-207ENST00000612558 TTC32Q5I0X7 151 aa5.88□□□□□ -1.47
CCDC47-207ENST00000612558 C6orf48Q9UBA6 75 aa5.88□□□□□ -1.47
CCDC47-207ENST00000612558 GAGE10A6NGK3 116 aa5.87□□□□□ -1.47
CCDC47-207ENST00000612558 USP17L23D6RBM5 183 aa5.87□□□□□ -1.47
CCDC47-207ENST00000612558 GTF2H5Q6ZYL4 71 aa5.87□□□□□ -1.47
CCDC47-207ENST00000612558 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
CCDC47-207ENST00000612558 TRAV13-2A0A0B4J235 113 aa5.86□□□□□ -1.47
CCDC47-207ENST00000612558 NBDYA0A0U1RRE5 68 aa5.86□□□□□ -1.47
CCDC47-207ENST00000612558 H7C2G1 150 aa5.86□□□□□ -1.47
CCDC47-207ENST00000612558 K7EP34 96 aa5.86□□□□□ -1.47
CCDC47-207ENST00000612558 SYCNQ0VAF6 134 aa5.86□□□□□ -1.47
CCDC47-207ENST00000612558 Q1RN00 199 aa5.86□□□□□ -1.47
CCDC47-207ENST00000612558 CASC10Q5T4H9 136 aa5.86□□□□□ -1.47
CCDC47-207ENST00000612558 Q6ZRU5 148 aa5.86□□□□□ -1.47
CCDC47-207ENST00000612558 SPCS1Q9Y6A9 102 aa5.86□□□□□ -1.47
CCDC47-207ENST00000612558 NDUFC2O95298 119 aa5.85□□□□□ -1.47
CCDC47-207ENST00000612558 RPL13AP40429 203 aaKnown RBP5.85□□□□□ -1.47
CCDC47-207ENST00000612558 PSMB2P49721 201 aa5.85□□□□□ -1.47
CCDC47-207ENST00000612558 LYRM7Q5U5X0 104 aa5.85□□□□□ -1.47
CCDC47-207ENST00000612558 WWC2-AS2Q96NR7 200 aa5.85□□□□□ -1.47
CCDC47-207ENST00000612558 IGKV2-28A0A075B6P5 120 aa5.84□□□□□ -1.47
CCDC47-207ENST00000612558 PSCAO43653 123 aa5.84□□□□□ -1.47
CCDC47-207ENST00000612558 IGKV2D-28P01615 120 aa5.84□□□□□ -1.47
CCDC47-207ENST00000612558 SCGB1C2P0DMR2 95 aa5.84□□□□□ -1.47
CCDC47-207ENST00000612558 RNF151Q2KHN1 245 aa5.84□□□□□ -1.47
CCDC47-207ENST00000612558 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.47
CCDC47-207ENST00000612558 TGP01266 2768 aa5.84□□□□□ -1.47
CCDC47-207ENST00000612558 NDUFC2-KCTD14E9PQ53 114 aa5.84□□□□□ -1.48
CCDC47-207ENST00000612558 TRBV20-1A0A075B6N2 111 aa5.83□□□□□ -1.48
CCDC47-207ENST00000612558 COX6CP09669 75 aa5.83□□□□□ -1.48
CCDC47-207ENST00000612558 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
CCDC47-207ENST00000612558 CARD19Q96LW7 228 aa5.83□□□□□ -1.48
CCDC47-207ENST00000612558 DNAH10Q8IVF4 4471 aa5.82□□□□□ -1.48
CCDC47-207ENST00000612558 LECT2O14960 151 aa5.82□□□□□ -1.48
CCDC47-207ENST00000612558 TRIAP1O43715 76 aa5.82□□□□□ -1.48
CCDC47-207ENST00000612558 SLPIP03973 132 aa5.82□□□□□ -1.48
CCDC47-207ENST00000612558 C14orf177Q52M58 125 aa5.81□□□□□ -1.48
CCDC47-207ENST00000612558 DNAH6Q9C0G6 4158 aa5.81□□□□□ -1.48
CCDC47-207ENST00000612558 TCL1BO95988 128 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 TLX1NBP0CAT3 122 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 PRR3P79522 188 aaKnown RBP5.8□□□□□ -1.48
CCDC47-207ENST00000612558 Q6ZRP5 223 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 OR13C6PQ8NH95 151 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 XAGE1AQ9HD64 81 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 KMT2AQ03164 3969 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 H3BMG7 143 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 M0R2N4 97 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 RPL28P46779 137 aaKnown RBP5.8□□□□□ -1.48
CCDC47-207ENST00000612558 WFDC2Q14508 124 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 GAGE2EQ4V326 116 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 TMEM126AQ9H061 195 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 GAGE2DQ9UEU5 116 aa5.8□□□□□ -1.48
CCDC47-207ENST00000612558 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
CCDC47-207ENST00000612558 C3orf84H3BNL1 204 aa5.79□□□□□ -1.48
CCDC47-207ENST00000612558 CNBPP62633 177 aaKnown RBP5.79□□□□□ -1.48
CCDC47-207ENST00000612558 Q6ZRN7 208 aaPredicted RBP5.79□□□□□ -1.48
CCDC47-207ENST00000612558 Q8NDZ9 215 aa5.79□□□□□ -1.48
CCDC47-207ENST00000612558 LRCOL1A6NCL2 159 aa5.78□□□□□ -1.48
CCDC47-207ENST00000612558 NCR3O14931 201 aa5.78□□□□□ -1.48
CCDC47-207ENST00000612558 ATXN8Q156A1 80 aa5.78□□□□□ -1.48
CCDC47-207ENST00000612558 Q6ZR54 194 aa5.78□□□□□ -1.48
CCDC47-207ENST00000612558 Q8N1X5 172 aa5.78□□□□□ -1.48
CCDC47-207ENST00000612558 SMIM11BQ8TCY0 68 aa5.78□□□□□ -1.48
CCDC47-207ENST00000612558 LOC107984640A0A0U1RRK4 108 aa5.77□□□□□ -1.49
CCDC47-207ENST00000612558 F8W1H4 67 aa5.77□□□□□ -1.49
CCDC47-207ENST00000612558 LY6G6CO95867 125 aa5.77□□□□□ -1.49
CCDC47-207ENST00000612558 RPL18AQ02543 176 aaKnown RBP5.77□□□□□ -1.49
CCDC47-207ENST00000612558 S100A7L2Q5SY68 101 aa5.77□□□□□ -1.49
CCDC47-207ENST00000612558 ALMS1Q8TCU4 4167 aa5.77□□□□□ -1.49
CCDC47-207ENST00000612558 VPREB1P12018 145 aa5.76□□□□□ -1.49
CCDC47-207ENST00000612558 C9orf129Q5T035 196 aaKnown RBP5.76□□□□□ -1.49
CCDC47-207ENST00000612558 LINC00476Q8WZB0 136 aa5.76□□□□□ -1.49
CCDC47-207ENST00000612558 H0YGX0 51 aa5.76□□□□□ -1.49
CCDC47-207ENST00000612558 LST1O00453 97 aa5.76□□□□□ -1.49
CCDC47-207ENST00000612558 IGLV6-57P01721 117 aa5.76□□□□□ -1.49
CCDC47-207ENST00000612558 CLEC2BQ92478 149 aa5.76□□□□□ -1.49
CCDC47-207ENST00000612558 M0R378 163 aa5.75□□□□□ -1.49
CCDC47-207ENST00000612558 GAGE2BQ13066 116 aa5.75□□□□□ -1.49
CCDC47-207ENST00000612558 PRO0461Q9UI25 63 aa5.75□□□□□ -1.49
CCDC47-207ENST00000612558 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.74□□□□□ -1.49
CCDC47-207ENST00000612558 LINC01620Q4KN68 170 aa5.74□□□□□ -1.49
CCDC47-207ENST00000612558 C1orf134Q5TEV5 83 aa5.74□□□□□ -1.49
CCDC47-207ENST00000612558 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
CCDC47-207ENST00000612558 MTURNQ8N3F0 131 aa5.73□□□□□ -1.49
CCDC47-207ENST00000612558 Q8N814 137 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms