RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 IGKV2-28A0A075B6P5 120 aa8.11□□□□□ -1.11
SENP3-209ENST00000610454 MYMXA0A1B0GTQ4 84 aa8.11□□□□□ -1.11
SENP3-209ENST00000610454 IGKV2D-28P01615 120 aa8.11□□□□□ -1.11
SENP3-209ENST00000610454 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
SENP3-209ENST00000610454 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
SENP3-209ENST00000610454 IGKCP01834 107 aa8.1□□□□□ -1.11
SENP3-209ENST00000610454 VPREB1P12018 145 aa8.1□□□□□ -1.11
SENP3-209ENST00000610454 UBE2AP49459 152 aa8.1□□□□□ -1.11
SENP3-209ENST00000610454 PLEKHB2Q96CS7 222 aa8.1□□□□□ -1.11
SENP3-209ENST00000610454 IGLV1-50A0A075B6I6 118 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 LEPROTO15243 131 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST1H2BKO60814 126 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST1H2BJP06899 126 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 SMIM13P0DJ93 91 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST1H2BOP23527 126 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST1H2BBP33778 126 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST1H2BDP58876 126 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST1H2BCP62807 126 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST2H2BEQ16778 126 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST1H2BHQ93079 126 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST1H2BNQ99877 126 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 HIST1H2BMQ99879 126 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 PMCHL2Q9BQD1 86 aa8.09□□□□□ -1.11
SENP3-209ENST00000610454 PRR26Q8N8Z3 221 aa8.08□□□□□ -1.12
SENP3-209ENST00000610454 LGALS3P17931 250 aaKnown RBP8.07□□□□□ -1.12
SENP3-209ENST00000610454 RPL13AP40429 203 aaKnown RBP8.07□□□□□ -1.12
SENP3-209ENST00000610454 J3QQQ9 107 aa8.06□□□□□ -1.12
SENP3-209ENST00000610454 MIR7-3HGQ8N6C7 128 aa8.06□□□□□ -1.12
SENP3-209ENST00000610454 TNXBP22105 4242 aa8.06□□□□□ -1.12
SENP3-209ENST00000610454 KRTAP1-4P0C5Y4 121 aa8.05□□□□□ -1.12
SENP3-209ENST00000610454 NMUP48645 174 aa8.05□□□□□ -1.12
SENP3-209ENST00000610454 FAM19A1Q7Z5A9 133 aa8.05□□□□□ -1.12
SENP3-209ENST00000610454 BOD1L2Q8IYS8 172 aa8.05□□□□□ -1.12
SENP3-209ENST00000610454 SYS1-DBNDD2H3BUS1 97 aa8.04□□□□□ -1.12
SENP3-209ENST00000610454 M0R378 163 aa8.04□□□□□ -1.12
SENP3-209ENST00000610454 TSPEAR-AS2P59090 65 aa8.04□□□□□ -1.12
SENP3-209ENST00000610454 TMEM126AQ9H061 195 aa8.04□□□□□ -1.12
SENP3-209ENST00000610454 HMCN2Q8NDA2 5059 aa8.04□□□□□ -1.12
SENP3-209ENST00000610454 TMEM238C9JI98 176 aa8.03□□□□□ -1.12
SENP3-209ENST00000610454 Q8NDZ9 215 aa8.03□□□□□ -1.12
SENP3-209ENST00000610454 MIEN1Q9BRT3 115 aa8.03□□□□□ -1.12
SENP3-209ENST00000610454 NCR3O14931 201 aa8.02□□□□□ -1.13
SENP3-209ENST00000610454 S100A12P80511 92 aa8.02□□□□□ -1.13
SENP3-209ENST00000610454 IGKV2D-26A0A0A0MRZ7 120 aa8.01□□□□□ -1.13
SENP3-209ENST00000610454 PRLHP81277 87 aa8.01□□□□□ -1.13
SENP3-209ENST00000610454 PET117Q6UWS5 81 aa8.01□□□□□ -1.13
SENP3-209ENST00000610454 E9PLD3 99 aa8□□□□□ -1.13
SENP3-209ENST00000610454 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
SENP3-209ENST00000610454 DAND5Q8N907 189 aa8□□□□□ -1.13
SENP3-209ENST00000610454 CRYGAP11844 174 aa7.99□□□□□ -1.13
SENP3-209ENST00000610454 LINC01545Q5VT33 79 aa7.99□□□□□ -1.13
SENP3-209ENST00000610454 C20orf202A1L168 122 aa7.98□□□□□ -1.13
SENP3-209ENST00000610454 PRYO14603 147 aa7.98□□□□□ -1.13
SENP3-209ENST00000610454 KRTDAPP60985 99 aa7.98□□□□□ -1.13
SENP3-209ENST00000610454 COA6Q5JTJ3 125 aaKnown RBP7.98□□□□□ -1.13
SENP3-209ENST00000610454 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
SENP3-209ENST00000610454 S100A1P23297 94 aa7.97□□□□□ -1.13
SENP3-209ENST00000610454 TYMSOSQ8TAI1 123 aa7.97□□□□□ -1.13
SENP3-209ENST00000610454 HIGD2AQ9BW72 106 aa7.97□□□□□ -1.13
SENP3-209ENST00000610454 A0A0J9YXY3 114 aa7.96□□□□□ -1.14
SENP3-209ENST00000610454 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
SENP3-209ENST00000610454 A0A087X002 238 aa7.95□□□□□ -1.14
SENP3-209ENST00000610454 LOC107984156A0A0G2JMH3 177 aa7.95□□□□□ -1.14
SENP3-209ENST00000610454 FAM229BQ4G0N7 80 aa7.95□□□□□ -1.14
SENP3-209ENST00000610454 ARL17AQ8IVW1 177 aa7.95□□□□□ -1.14
SENP3-209ENST00000610454 KCNQ1DNQ9H478 68 aa7.95□□□□□ -1.14
SENP3-209ENST00000610454 SPANXB1Q9NS25 103 aaPredicted RBP7.95□□□□□ -1.14
SENP3-209ENST00000610454 TRBV10-3A0A0K0K1G6 114 aa7.94□□□□□ -1.14
SENP3-209ENST00000610454 TRBV10-2A0A0K0K1G8 114 aa7.94□□□□□ -1.14
SENP3-209ENST00000610454 ZNF815PA8K554 130 aa7.94□□□□□ -1.14
SENP3-209ENST00000610454 DDTP30046 118 aa7.94□□□□□ -1.14
SENP3-209ENST00000610454 NPC2P61916 151 aa7.94□□□□□ -1.14
SENP3-209ENST00000610454 S100A7L2Q5SY68 101 aa7.94□□□□□ -1.14
SENP3-209ENST00000610454 ANAPC11Q9NYG5 84 aa7.94□□□□□ -1.14
SENP3-209ENST00000610454 NDUFC2O95298 119 aa7.93□□□□□ -1.14
SENP3-209ENST00000610454 AKR1D1P51857 326 aa7.93□□□□□ -1.14
SENP3-209ENST00000610454 LINC00337Q8N6G1 96 aa7.93□□□□□ -1.14
SENP3-209ENST00000610454 ZNF706Q9Y5V0 76 aaPredicted RBP7.93□□□□□ -1.14
SENP3-209ENST00000610454 TIMM17BO60830 172 aa7.9□□□□□ -1.14
SENP3-209ENST00000610454 S100A2P29034 98 aa7.9□□□□□ -1.14
SENP3-209ENST00000610454 SPRR1AP35321 89 aa7.9□□□□□ -1.14
SENP3-209ENST00000610454 ADAMTSL4-AS1Q5T5F5 129 aa7.9□□□□□ -1.14
SENP3-209ENST00000610454 CBY1Q9Y3M2 126 aa7.9□□□□□ -1.14
SENP3-209ENST00000610454 TSPAN13O95857 204 aa7.89□□□□□ -1.15
SENP3-209ENST00000610454 SCGB1D4Q6XE38 83 aa7.89□□□□□ -1.15
SENP3-209ENST00000610454 TRAV23DV6A0A075B6W5 121 aa7.88□□□□□ -1.15
SENP3-209ENST00000610454 S100A6P06703 90 aa7.88□□□□□ -1.15
SENP3-209ENST00000610454 PRR4Q16378 134 aa7.88□□□□□ -1.15
SENP3-209ENST00000610454 SOSTDC1Q6X4U4 206 aa7.88□□□□□ -1.15
SENP3-209ENST00000610454 SPRR4Q96PI1 79 aa7.88□□□□□ -1.15
SENP3-209ENST00000610454 SPANXCQ9NY87 97 aa7.88□□□□□ -1.15
SENP3-209ENST00000610454 IGLV6-57P01721 117 aa7.87□□□□□ -1.15
SENP3-209ENST00000610454 KRTAP13-2Q52LG2 175 aa7.87□□□□□ -1.15
SENP3-209ENST00000610454 ATOH7Q8N100 152 aa7.87□□□□□ -1.15
SENP3-209ENST00000610454 LINC00304Q8N9R0 145 aa7.87□□□□□ -1.15
SENP3-209ENST00000610454 OR13C6PQ8NH95 151 aa7.87□□□□□ -1.15
SENP3-209ENST00000610454 LINC00308Q8TCZ7 52 aa7.87□□□□□ -1.15
SENP3-209ENST00000610454 SMCR5Q8TEV8 140 aa7.87□□□□□ -1.15
SENP3-209ENST00000610454 TTTY13Q9BZ97 58 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 426.2 ms