RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 VPREB1P12018 145 aa9.07□□□□□ -0.96
LMBR1-220ENST00000609081 COLCA2A8K830 154 aa9.06□□□□□ -0.96
LMBR1-220ENST00000609081 PLNP26678 52 aa9.06□□□□□ -0.96
LMBR1-220ENST00000609081 LINC00158P58513 81 aa9.05□□□□□ -0.96
LMBR1-220ENST00000609081 ATP6V1G1O75348 118 aa9.04□□□□□ -0.96
LMBR1-220ENST00000609081 UBE2AP49459 152 aa9.04□□□□□ -0.96
LMBR1-220ENST00000609081 LINC00310P59036 64 aa9.04□□□□□ -0.96
LMBR1-220ENST00000609081 IGKV2-28A0A075B6P5 120 aa9.03□□□□□ -0.96
LMBR1-220ENST00000609081 H0Y8G0 127 aa9.03□□□□□ -0.96
LMBR1-220ENST00000609081 IGKV2D-28P01615 120 aa9.03□□□□□ -0.96
LMBR1-220ENST00000609081 MYMXA0A1B0GTQ4 84 aa9.02□□□□□ -0.97
LMBR1-220ENST00000609081 MEIG1Q5JSS6 88 aa9.02□□□□□ -0.97
LMBR1-220ENST00000609081 KRTAP13-1Q8IUC0 172 aa9.02□□□□□ -0.97
LMBR1-220ENST00000609081 MAP1LC3CQ9BXW4 147 aa9.02□□□□□ -0.97
LMBR1-220ENST00000609081 NDUFA12Q9UI09 145 aa9.02□□□□□ -0.97
LMBR1-220ENST00000609081 HERVK_113P61574 105 aa9.01□□□□□ -0.97
LMBR1-220ENST00000609081 PLEKHB2Q96CS7 222 aa9.01□□□□□ -0.97
LMBR1-220ENST00000609081 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
LMBR1-220ENST00000609081 DPM2O94777 84 aa9□□□□□ -0.97
LMBR1-220ENST00000609081 M0R378 163 aa8.99□□□□□ -0.97
LMBR1-220ENST00000609081 LEPROTO15243 131 aa8.99□□□□□ -0.97
LMBR1-220ENST00000609081 SCO1O75880 301 aa8.99□□□□□ -0.97
LMBR1-220ENST00000609081 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
LMBR1-220ENST00000609081 CRYGAP11844 174 aa8.99□□□□□ -0.97
LMBR1-220ENST00000609081 FABP4P15090 132 aa8.99□□□□□ -0.97
LMBR1-220ENST00000609081 IGKV2D-26A0A0A0MRZ7 120 aa8.98□□□□□ -0.97
LMBR1-220ENST00000609081 A0A0U1RRA0 63 aa8.98□□□□□ -0.97
LMBR1-220ENST00000609081 NMUP48645 174 aa8.98□□□□□ -0.97
LMBR1-220ENST00000609081 MIR7-3HGQ8N6C7 128 aa8.98□□□□□ -0.97
LMBR1-220ENST00000609081 UBR4Q5T4S7 5183 aa8.98□□□□□ -0.97
LMBR1-220ENST00000609081 IGKCP01834 107 aa8.97□□□□□ -0.97
LMBR1-220ENST00000609081 FAM229BQ4G0N7 80 aa8.97□□□□□ -0.97
LMBR1-220ENST00000609081 FAM19A1Q7Z5A9 133 aa8.97□□□□□ -0.97
LMBR1-220ENST00000609081 BOD1L2Q8IYS8 172 aa8.97□□□□□ -0.97
LMBR1-220ENST00000609081 Q8NDZ9 215 aa8.97□□□□□ -0.97
LMBR1-220ENST00000609081 LRP2P98164 4655 aa8.96□□□□□ -0.97
LMBR1-220ENST00000609081 LOC107984156A0A0G2JMH3 177 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 TMEM238C9JI98 176 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 J3QQQ9 107 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
LMBR1-220ENST00000609081 ARL17AQ8IVW1 177 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
LMBR1-220ENST00000609081 PRYO14603 147 aa8.94□□□□□ -0.98
LMBR1-220ENST00000609081 LGALS3P17931 250 aaKnown RBP8.94□□□□□ -0.98
LMBR1-220ENST00000609081 S100A12P80511 92 aa8.94□□□□□ -0.98
LMBR1-220ENST00000609081 PRLHP81277 87 aa8.94□□□□□ -0.98
LMBR1-220ENST00000609081 TYMSOSQ8TAI1 123 aa8.94□□□□□ -0.98
LMBR1-220ENST00000609081 A0A087X002 238 aa8.93□□□□□ -0.98
LMBR1-220ENST00000609081 TSPEAR-AS2P59090 65 aa8.93□□□□□ -0.98
LMBR1-220ENST00000609081 PMCHL2Q9BQD1 86 aa8.92□□□□□ -0.98
LMBR1-220ENST00000609081 KCNQ1DNQ9H478 68 aa8.92□□□□□ -0.98
LMBR1-220ENST00000609081 SYS1-DBNDD2H3BUS1 97 aa8.91□□□□□ -0.98
LMBR1-220ENST00000609081 CTAG1AP78358 180 aa8.91□□□□□ -0.98
LMBR1-220ENST00000609081 LINC00337Q8N6G1 96 aa8.91□□□□□ -0.98
LMBR1-220ENST00000609081 MIEN1Q9BRT3 115 aa8.91□□□□□ -0.98
LMBR1-220ENST00000609081 TRBV10-2A0A0K0K1G8 114 aa8.9□□□□□ -0.98
LMBR1-220ENST00000609081 E9PLD3 99 aa8.9□□□□□ -0.98
LMBR1-220ENST00000609081 NCR3O14931 201 aa8.89□□□□□ -0.99
LMBR1-220ENST00000609081 SPRR1AP35321 89 aa8.89□□□□□ -0.99
LMBR1-220ENST00000609081 PET117Q6UWS5 81 aa8.89□□□□□ -0.99
LMBR1-220ENST00000609081 HIGD2AQ9BW72 106 aa8.89□□□□□ -0.99
LMBR1-220ENST00000609081 ZNF706Q9Y5V0 76 aaPredicted RBP8.89□□□□□ -0.99
LMBR1-220ENST00000609081 NDUFC2O95298 119 aa8.88□□□□□ -0.99
LMBR1-220ENST00000609081 SPANXB1Q9NS25 103 aaPredicted RBP8.88□□□□□ -0.99
LMBR1-220ENST00000609081 TRBV10-3A0A0K0K1G6 114 aa8.87□□□□□ -0.99
LMBR1-220ENST00000609081 COA6Q5JTJ3 125 aaKnown RBP8.87□□□□□ -0.99
LMBR1-220ENST00000609081 LINC01545Q5VT33 79 aa8.87□□□□□ -0.99
LMBR1-220ENST00000609081 ETDCA0A1B0GVM5 59 aa8.86□□□□□ -0.99
LMBR1-220ENST00000609081 KRTAP13-2Q52LG2 175 aa8.86□□□□□ -0.99
LMBR1-220ENST00000609081 DAND5Q8N907 189 aa8.86□□□□□ -0.99
LMBR1-220ENST00000609081 ANAPC11Q9NYG5 84 aa8.86□□□□□ -0.99
LMBR1-220ENST00000609081 KRTAP4-16G5E9R7 235 aaPredicted RBP8.85□□□□□ -0.99
LMBR1-220ENST00000609081 CBY1Q9Y3M2 126 aa8.85□□□□□ -0.99
LMBR1-220ENST00000609081 A0A0J9YXY3 114 aa8.84□□□□□ -0.99
LMBR1-220ENST00000609081 DDTP30046 118 aa8.84□□□□□ -0.99
LMBR1-220ENST00000609081 PRR4Q16378 134 aa8.84□□□□□ -0.99
LMBR1-220ENST00000609081 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
LMBR1-220ENST00000609081 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
LMBR1-220ENST00000609081 SPRR4Q96PI1 79 aa8.84□□□□□ -0.99
LMBR1-220ENST00000609081 TIMM17BO60830 172 aa8.83□□□□□ -1
LMBR1-220ENST00000609081 TSPAN13O95857 204 aa8.83□□□□□ -1
LMBR1-220ENST00000609081 AKR1D1P51857 326 aa8.82□□□□□ -1
LMBR1-220ENST00000609081 S100A7L2Q5SY68 101 aa8.82□□□□□ -1
LMBR1-220ENST00000609081 IGLV6-57P01721 117 aa8.81□□□□□ -1
LMBR1-220ENST00000609081 C20orf202A1L168 122 aa8.8□□□□□ -1
LMBR1-220ENST00000609081 C3orf79P0CE67 100 aa8.8□□□□□ -1
LMBR1-220ENST00000609081 SPAG11AQ6PDA7 123 aa8.8□□□□□ -1
LMBR1-220ENST00000609081 SMCR5Q8TEV8 140 aa8.8□□□□□ -1
LMBR1-220ENST00000609081 B5MCH6 92 aa8.79□□□□□ -1
LMBR1-220ENST00000609081 JOSD1Q15040 202 aaPredicted RBP8.79□□□□□ -1
LMBR1-220ENST00000609081 ADAMTSL4-AS1Q5T5F5 129 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms