RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 DNAH10Q8IVF4 4471 aa11.67□□□□□ -0.54
VRK3-225ENST00000601912 TRAV13-2A0A0B4J235 113 aa11.67□□□□□ -0.54
VRK3-225ENST00000601912 LOC107984640A0A0U1RRK4 108 aa11.67□□□□□ -0.54
VRK3-225ENST00000601912 H3BUT2 72 aa11.66□□□□□ -0.54
VRK3-225ENST00000601912 DNAH6Q9C0G6 4158 aa11.66□□□□□ -0.54
VRK3-225ENST00000601912 IGKV2-28A0A075B6P5 120 aa11.65□□□□□ -0.55
VRK3-225ENST00000601912 A0A1B0GV90 55 aa11.65□□□□□ -0.55
VRK3-225ENST00000601912 H7C2G1 150 aa11.65□□□□□ -0.55
VRK3-225ENST00000601912 TSPAN13O95857 204 aa11.65□□□□□ -0.55
VRK3-225ENST00000601912 IGKV2D-28P01615 120 aa11.65□□□□□ -0.55
VRK3-225ENST00000601912 RPL13AP40429 203 aaKnown RBP11.65□□□□□ -0.55
VRK3-225ENST00000601912 Q1RN00 199 aa11.65□□□□□ -0.55
VRK3-225ENST00000601912 NAA38Q9BRA0 125 aaKnown RBP11.64□□□□□ -0.55
VRK3-225ENST00000601912 PKIGQ9Y2B9 76 aa11.64□□□□□ -0.55
VRK3-225ENST00000601912 GAGE2BQ13066 116 aa11.63□□□□□ -0.55
VRK3-225ENST00000601912 LCE6AA0A183 80 aa11.62□□□□□ -0.55
VRK3-225ENST00000601912 LINC00337Q8N6G1 96 aa11.62□□□□□ -0.55
VRK3-225ENST00000601912 C9orf163Q8N9P6 203 aa11.62□□□□□ -0.55
VRK3-225ENST00000601912 OR13C6PQ8NH95 151 aa11.62□□□□□ -0.55
VRK3-225ENST00000601912 PRR3P79522 188 aaKnown RBP11.61□□□□□ -0.55
VRK3-225ENST00000601912 C9orf129Q5T035 196 aaKnown RBP11.61□□□□□ -0.55
VRK3-225ENST00000601912 A0A1W2PPM0 123 aa11.6□□□□□ -0.55
VRK3-225ENST00000601912 NCR3O14931 201 aa11.6□□□□□ -0.55
VRK3-225ENST00000601912 PSMB2P49721 201 aa11.6□□□□□ -0.55
VRK3-225ENST00000601912 TRBV10-2A0A0K0K1G8 114 aa11.59□□□□□ -0.55
VRK3-225ENST00000601912 FABP2P12104 132 aa11.59□□□□□ -0.55
VRK3-225ENST00000601912 Q8NDZ9 215 aa11.59□□□□□ -0.55
VRK3-225ENST00000601912 C16orf90A8MZG2 172 aa11.59□□□□□ -0.55
VRK3-225ENST00000601912 VAMP3Q15836 100 aa11.59□□□□□ -0.55
VRK3-225ENST00000601912 RTL8CO15255 209 aa11.58□□□□□ -0.56
VRK3-225ENST00000601912 VPREB1P12018 145 aa11.58□□□□□ -0.56
VRK3-225ENST00000601912 S100A7L2Q5SY68 101 aa11.58□□□□□ -0.56
VRK3-225ENST00000601912 TMEM126AQ9H061 195 aa11.58□□□□□ -0.56
VRK3-225ENST00000601912 TNP2Q05952 138 aa11.57□□□□□ -0.56
VRK3-225ENST00000601912 LYRM7Q5U5X0 104 aa11.57□□□□□ -0.56
VRK3-225ENST00000601912 PLA2G2DQ9UNK4 145 aa11.57□□□□□ -0.56
VRK3-225ENST00000601912 COX6CP09669 75 aa11.55□□□□□ -0.56
VRK3-225ENST00000601912 SCGB1C2P0DMR2 95 aa11.55□□□□□ -0.56
VRK3-225ENST00000601912 A0A096LNI7 61 aa11.55□□□□□ -0.56
VRK3-225ENST00000601912 NKAPP1Q8N9T2 125 aa11.55□□□□□ -0.56
VRK3-225ENST00000601912 DNAH2Q9P225 4427 aa11.54□□□□□ -0.56
VRK3-225ENST00000601912 IGKV2-24A0A0C4DH68 120 aa11.54□□□□□ -0.56
VRK3-225ENST00000601912 M0R378 163 aa11.54□□□□□ -0.56
VRK3-225ENST00000601912 TRIAP1O43715 76 aa11.53□□□□□ -0.56
VRK3-225ENST00000601912 SDIM1Q6ZPB5 146 aa11.53□□□□□ -0.56
VRK3-225ENST00000601912 LINC00474Q9P2X8 69 aa11.53□□□□□ -0.56
VRK3-225ENST00000601912 IGLV5-52A0A0A0MRZ9 124 aa11.52□□□□□ -0.56
VRK3-225ENST00000601912 RPL28P46779 137 aaKnown RBP11.52□□□□□ -0.56
VRK3-225ENST00000601912 SERTAD4-AS1Q5TG53 156 aa11.52□□□□□ -0.56
VRK3-225ENST00000601912 SMIM11BQ8TCY0 68 aa11.52□□□□□ -0.56
VRK3-225ENST00000601912 SPCS1Q9Y6A9 102 aa11.52□□□□□ -0.56
VRK3-225ENST00000601912 LINC01620Q4KN68 170 aa11.52□□□□□ -0.57
VRK3-225ENST00000601912 GAGE10A6NGK3 116 aa11.51□□□□□ -0.57
VRK3-225ENST00000601912 IGLV6-57P01721 117 aa11.51□□□□□ -0.57
VRK3-225ENST00000601912 GTF2H5Q6ZYL4 71 aa11.51□□□□□ -0.57
VRK3-225ENST00000601912 IGLV5-37A0A075B6J1 123 aa11.5□□□□□ -0.57
VRK3-225ENST00000601912 FAM168BA1KXE4 195 aa11.5□□□□□ -0.57
VRK3-225ENST00000601912 CBY1Q9Y3M2 126 aa11.49□□□□□ -0.57
VRK3-225ENST00000601912 TRBV20-1A0A075B6N2 111 aa11.49□□□□□ -0.57
VRK3-225ENST00000601912 TRBV10-3A0A0K0K1G6 114 aa11.49□□□□□ -0.57
VRK3-225ENST00000601912 K7EP34 96 aa11.49□□□□□ -0.57
VRK3-225ENST00000601912 FAM19A5Q7Z5A7 132 aaPredicted RBP11.49□□□□□ -0.57
VRK3-225ENST00000601912 DNAH17Q9UFH2 4485 aa11.48□□□□□ -0.57
VRK3-225ENST00000601912 CHTF8P0CG12 524 aa11.47□□□□□ -0.57
VRK3-225ENST00000601912 FUSP35637 526 aaKnown RBP eCLIP11.47□□□□□ -0.57
VRK3-225ENST00000601912 C22orf24Q9Y442 160 aa11.47□□□□□ -0.57
VRK3-225ENST00000601912 C7orf33Q8WU49 177 aa11.46□□□□□ -0.57
VRK3-225ENST00000601912 HYDINQ4G0P3 5121 aa11.46□□□□□ -0.57
VRK3-225ENST00000601912 UBE2V1Q13404 147 aa11.46□□□□□ -0.58
VRK3-225ENST00000601912 DPH3Q96FX2 82 aa11.46□□□□□ -0.58
VRK3-225ENST00000601912 TRAV23DV6A0A075B6W5 121 aa11.45□□□□□ -0.58
VRK3-225ENST00000601912 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
VRK3-225ENST00000601912 KRTAP7-1Q8IUC3 87 aa11.45□□□□□ -0.58
VRK3-225ENST00000601912 SACSQ9NZJ4 4579 aa11.44□□□□□ -0.58
VRK3-225ENST00000601912 H0YGX0 51 aa11.44□□□□□ -0.58
VRK3-225ENST00000601912 TCL1BO95988 128 aa11.44□□□□□ -0.58
VRK3-225ENST00000601912 LINC00336Q6ZUF6 198 aa11.44□□□□□ -0.58
VRK3-225ENST00000601912 A0A1W2PNN7 141 aa11.43□□□□□ -0.58
VRK3-225ENST00000601912 ATXN8Q156A1 80 aa11.43□□□□□ -0.58
VRK3-225ENST00000601912 M0QXV9 152 aa11.43□□□□□ -0.58
VRK3-225ENST00000601912 C6orf99Q4VX62 202 aa11.43□□□□□ -0.58
VRK3-225ENST00000601912 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
VRK3-225ENST00000601912 LINC00167Q96N53 147 aa11.42□□□□□ -0.58
VRK3-225ENST00000601912 FRAS1Q86XX4 4008 aa11.41□□□□□ -0.58
VRK3-225ENST00000601912 H3BMG7 143 aa11.41□□□□□ -0.58
VRK3-225ENST00000601912 SPACA4Q8TDM5 124 aa11.41□□□□□ -0.58
VRK3-225ENST00000601912 CLEC2BQ92478 149 aa11.41□□□□□ -0.58
VRK3-225ENST00000601912 DIRC1Q969H9 104 aa11.41□□□□□ -0.58
VRK3-225ENST00000601912 ZNF73O43830 326 aaPredicted RBP11.4□□□□□ -0.58
VRK3-225ENST00000601912 KCNQ1DNQ9H478 68 aa11.4□□□□□ -0.58
VRK3-225ENST00000601912 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.4□□□□□ -0.58
VRK3-225ENST00000601912 IGLV1-50A0A075B6I6 118 aa11.4□□□□□ -0.59
VRK3-225ENST00000601912 RPL37AP8A6NKH3 93 aa11.4□□□□□ -0.59
VRK3-225ENST00000601912 PANO1I0J062 215 aa11.39□□□□□ -0.59
VRK3-225ENST00000601912 LST1O00453 97 aa11.38□□□□□ -0.59
VRK3-225ENST00000601912 PRYO14603 147 aa11.36□□□□□ -0.59
VRK3-225ENST00000601912 TRBV7-6A0A0J9YX20 115 aa11.36□□□□□ -0.59
VRK3-225ENST00000601912 HECTD4Q9Y4D8 3996 aa11.35□□□□□ -0.59
VRK3-225ENST00000601912 A0A087WYN8 130 aa11.35□□□□□ -0.59
VRK3-225ENST00000601912 SNCGO76070 127 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms