RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 MIEN1Q9BRT3 115 aa8.09□□□□□ -1.11
SRRM1-223ENST00000600523 PSORS1C2Q9UIG4 136 aa8.09□□□□□ -1.11
SRRM1-223ENST00000600523 FAT1Q14517 4588 aa8.08□□□□□ -1.12
SRRM1-223ENST00000600523 TSPEAR-AS2P59090 65 aa8.08□□□□□ -1.12
SRRM1-223ENST00000600523 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
SRRM1-223ENST00000600523 SNRPEP62304 92 aaKnown RBP8.08□□□□□ -1.12
SRRM1-223ENST00000600523 MIR7-3HGQ8N6C7 128 aa8.08□□□□□ -1.12
SRRM1-223ENST00000600523 HSBP1L1C9JCN9 74 aa8.07□□□□□ -1.12
SRRM1-223ENST00000600523 IGLV5-37A0A075B6J1 123 aa8.06□□□□□ -1.12
SRRM1-223ENST00000600523 SPINK6Q6UWN8 80 aa8.06□□□□□ -1.12
SRRM1-223ENST00000600523 KRTAP7-1Q8IUC3 87 aa8.06□□□□□ -1.12
SRRM1-223ENST00000600523 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
SRRM1-223ENST00000600523 BOD1L2Q8IYS8 172 aa8.05□□□□□ -1.12
SRRM1-223ENST00000600523 TMA7Q9Y2S6 64 aaKnown RBP8.05□□□□□ -1.12
SRRM1-223ENST00000600523 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
SRRM1-223ENST00000600523 ZNF815PA8K554 130 aa8.04□□□□□ -1.12
SRRM1-223ENST00000600523 J3QL48 77 aa8.04□□□□□ -1.12
SRRM1-223ENST00000600523 S100A12P80511 92 aa8.04□□□□□ -1.12
SRRM1-223ENST00000600523 REG3GQ6UW15 175 aa8.04□□□□□ -1.12
SRRM1-223ENST00000600523 ATOH7Q8N100 152 aa8.04□□□□□ -1.12
SRRM1-223ENST00000600523 LINC00167Q96N53 147 aa8.04□□□□□ -1.12
SRRM1-223ENST00000600523 A0A0J9YXY3 114 aa8.03□□□□□ -1.12
SRRM1-223ENST00000600523 C5orf52A6NGY3 159 aa8.03□□□□□ -1.12
SRRM1-223ENST00000600523 RPL37AP8A6NKH3 93 aa8.03□□□□□ -1.12
SRRM1-223ENST00000600523 OXTP01178 125 aa8.03□□□□□ -1.12
SRRM1-223ENST00000600523 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
SRRM1-223ENST00000600523 VPREB1P12018 145 aa8.03□□□□□ -1.12
SRRM1-223ENST00000600523 SCGB1D4Q6XE38 83 aa8.03□□□□□ -1.12
SRRM1-223ENST00000600523 IGKV2D-26A0A0A0MRZ7 120 aa8.02□□□□□ -1.13
SRRM1-223ENST00000600523 M0R378 163 aa8.02□□□□□ -1.13
SRRM1-223ENST00000600523 SCGB1D1O95968 90 aa8.02□□□□□ -1.13
SRRM1-223ENST00000600523 DIRC1Q969H9 104 aa8.02□□□□□ -1.13
SRRM1-223ENST00000600523 HNRNPA3P51991 378 aaKnown RBP8.01□□□□□ -1.13
SRRM1-223ENST00000600523 COPS9Q8WXC6 57 aa8.01□□□□□ -1.13
SRRM1-223ENST00000600523 IGKV2-28A0A075B6P5 120 aa8□□□□□ -1.13
SRRM1-223ENST00000600523 BCE1O60756 84 aa8□□□□□ -1.13
SRRM1-223ENST00000600523 TIMM17BO60830 172 aa8□□□□□ -1.13
SRRM1-223ENST00000600523 IGKV2D-28P01615 120 aa8□□□□□ -1.13
SRRM1-223ENST00000600523 RPL28P46779 137 aaKnown RBP8□□□□□ -1.13
SRRM1-223ENST00000600523 DAND5Q8N907 189 aa8□□□□□ -1.13
SRRM1-223ENST00000600523 KRTAP29-1A8MX34 341 aaPredicted RBP7.99□□□□□ -1.13
SRRM1-223ENST00000600523 TMEM238C9JI98 176 aa7.99□□□□□ -1.13
SRRM1-223ENST00000600523 SRSF9Q13242 221 aaKnown RBP eCLIP7.99□□□□□ -1.13
SRRM1-223ENST00000600523 VPS13BQ7Z7G8 4022 aa7.99□□□□□ -1.13
SRRM1-223ENST00000600523 IGLV1-50A0A075B6I6 118 aa7.98□□□□□ -1.13
SRRM1-223ENST00000600523 LOC107984156A0A0G2JMH3 177 aa7.98□□□□□ -1.13
SRRM1-223ENST00000600523 UBE2AP49459 152 aa7.98□□□□□ -1.13
SRRM1-223ENST00000600523 ANKRD39Q53RE8 183 aa7.98□□□□□ -1.13
SRRM1-223ENST00000600523 KRTAP11-1Q8IUC1 163 aa7.98□□□□□ -1.13
SRRM1-223ENST00000600523 ARL17AQ8IVW1 177 aa7.98□□□□□ -1.13
SRRM1-223ENST00000600523 PCLOQ9Y6V0 5065 aa7.97□□□□□ -1.13
SRRM1-223ENST00000600523 TRBV10-2A0A0K0K1G8 114 aa7.97□□□□□ -1.13
SRRM1-223ENST00000600523 NCR3O14931 201 aa7.97□□□□□ -1.13
SRRM1-223ENST00000600523 ZNF861PO60384 105 aa7.97□□□□□ -1.13
SRRM1-223ENST00000600523 NDUFC2O95298 119 aa7.97□□□□□ -1.13
SRRM1-223ENST00000600523 SPANXB1Q9NS25 103 aaPredicted RBP7.97□□□□□ -1.13
SRRM1-223ENST00000600523 FLG2Q5D862 2391 aaPredicted RBP7.97□□□□□ -1.13
SRRM1-223ENST00000600523 S100A7L2Q5SY68 101 aa7.96□□□□□ -1.14
SRRM1-223ENST00000600523 CBY1Q9Y3M2 126 aa7.96□□□□□ -1.14
SRRM1-223ENST00000600523 ABCA13Q86UQ4 5058 aa7.96□□□□□ -1.14
SRRM1-223ENST00000600523 H0Y9J4 135 aa7.95□□□□□ -1.14
SRRM1-223ENST00000600523 NPC2P61916 151 aa7.95□□□□□ -1.14
SRRM1-223ENST00000600523 ADAMTSL4-AS1Q5T5F5 129 aa7.95□□□□□ -1.14
SRRM1-223ENST00000600523 TTTY13Q9BZ97 58 aa7.95□□□□□ -1.14
SRRM1-223ENST00000600523 TMEM126AQ9H061 195 aa7.95□□□□□ -1.14
SRRM1-223ENST00000600523 PRYO14603 147 aa7.94□□□□□ -1.14
SRRM1-223ENST00000600523 Q6ZVH6 145 aa7.94□□□□□ -1.14
SRRM1-223ENST00000600523 FAM19A1Q7Z5A9 133 aa7.94□□□□□ -1.14
SRRM1-223ENST00000600523 SPANXCQ9NY87 97 aa7.94□□□□□ -1.14
SRRM1-223ENST00000600523 DDTP30046 118 aa7.93□□□□□ -1.14
SRRM1-223ENST00000600523 PCP2Q8IVA1 136 aa7.93□□□□□ -1.14
SRRM1-223ENST00000600523 Q8NDZ9 215 aa7.93□□□□□ -1.14
SRRM1-223ENST00000600523 LINC00308Q8TCZ7 52 aa7.93□□□□□ -1.14
SRRM1-223ENST00000600523 IFITM1P13164 125 aa7.92□□□□□ -1.14
SRRM1-223ENST00000600523 LINC00518Q8N0U6 118 aa7.92□□□□□ -1.14
SRRM1-223ENST00000600523 LITAFQ99732 161 aa7.92□□□□□ -1.14
SRRM1-223ENST00000600523 SPANXDQ9BXN6 97 aa7.92□□□□□ -1.14
SRRM1-223ENST00000600523 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
SRRM1-223ENST00000600523 ETDCA0A1B0GVM5 59 aa7.91□□□□□ -1.14
SRRM1-223ENST00000600523 LINC01600Q96MT4 127 aa7.91□□□□□ -1.14
SRRM1-223ENST00000600523 OR13C6PQ8NH95 151 aa7.9□□□□□ -1.14
SRRM1-223ENST00000600523 VAMP8Q9BV40 100 aa7.9□□□□□ -1.14
SRRM1-223ENST00000600523 KCNQ1DNQ9H478 68 aa7.9□□□□□ -1.14
SRRM1-223ENST00000600523 HINT1P49773 126 aaPredicted RBP7.89□□□□□ -1.15
SRRM1-223ENST00000600523 PRLHP81277 87 aa7.89□□□□□ -1.15
SRRM1-223ENST00000600523 JOSD1Q15040 202 aaPredicted RBP7.89□□□□□ -1.15
SRRM1-223ENST00000600523 SOSTDC1Q6X4U4 206 aa7.89□□□□□ -1.15
SRRM1-223ENST00000600523 LINC00337Q8N6G1 96 aa7.89□□□□□ -1.15
SRRM1-223ENST00000600523 DMBT1Q9UGM3 2413 aaPredicted RBP7.88□□□□□ -1.15
SRRM1-223ENST00000600523 PPDPFQ9H3Y8 114 aa7.88□□□□□ -1.15
SRRM1-223ENST00000600523 HIGD2AQ9BW72 106 aa7.87□□□□□ -1.15
SRRM1-223ENST00000600523 PAM16Q9Y3D7 125 aa7.87□□□□□ -1.15
SRRM1-223ENST00000600523 TRAV23DV6A0A075B6W5 121 aa7.86□□□□□ -1.15
SRRM1-223ENST00000600523 IGLV6-57P01721 117 aa7.86□□□□□ -1.15
SRRM1-223ENST00000600523 COX8AP10176 69 aa7.86□□□□□ -1.15
SRRM1-223ENST00000600523 RPL13AP40429 203 aaKnown RBP7.86□□□□□ -1.15
SRRM1-223ENST00000600523 SPATA45Q537H7 98 aa7.86□□□□□ -1.15
SRRM1-223ENST00000600523 EIF4EBP3O60516 100 aaPredicted RBP7.85□□□□□ -1.15
SRRM1-223ENST00000600523 SPRR1AP35321 89 aa7.85□□□□□ -1.15
SRRM1-223ENST00000600523 KRTAP13-1Q8IUC0 172 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms