RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 FXYD2P54710 66 aa8.63□□□□□ -1.03
SCAF1-203ENST00000598359 C7orf33Q8WU49 177 aa8.63□□□□□ -1.03
SCAF1-203ENST00000598359 LINC00242Q5T6M2 205 aa8.62□□□□□ -1.03
SCAF1-203ENST00000598359 GEMIN7Q9H840 131 aaKnown RBP8.62□□□□□ -1.03
SCAF1-203ENST00000598359 IGLV5-39A0A0G2JS06 123 aa8.61□□□□□ -1.03
SCAF1-203ENST00000598359 A0A1B0GWB2 263 aa8.61□□□□□ -1.03
SCAF1-203ENST00000598359 GAGE2BQ13066 116 aa8.61□□□□□ -1.03
SCAF1-203ENST00000598359 SCGB1D4Q6XE38 83 aa8.61□□□□□ -1.03
SCAF1-203ENST00000598359 LINC00469Q8N7U9 141 aa8.61□□□□□ -1.03
SCAF1-203ENST00000598359 CAMK2N2Q96S95 79 aa8.61□□□□□ -1.03
SCAF1-203ENST00000598359 HIST1H4GQ99525 98 aa8.61□□□□□ -1.03
SCAF1-203ENST00000598359 MT1HL1P0DM35 61 aa8.6□□□□□ -1.03
SCAF1-203ENST00000598359 SPAG11BQ08648 103 aa8.6□□□□□ -1.03
SCAF1-203ENST00000598359 CDKN2A-AS1Q9UH64 79 aa8.6□□□□□ -1.03
SCAF1-203ENST00000598359 C9orf118A6NHY6 69 aa8.59□□□□□ -1.03
SCAF1-203ENST00000598359 PTTG1IPP53801 180 aa8.59□□□□□ -1.03
SCAF1-203ENST00000598359 PRR3P79522 188 aaKnown RBP8.59□□□□□ -1.03
SCAF1-203ENST00000598359 Q6ZVH6 145 aa8.59□□□□□ -1.03
SCAF1-203ENST00000598359 LINC00474Q9P2X8 69 aa8.59□□□□□ -1.03
SCAF1-203ENST00000598359 LOC107984640A0A0U1RRK4 108 aa8.58□□□□□ -1.04
SCAF1-203ENST00000598359 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
SCAF1-203ENST00000598359 SMIM13P0DJ93 91 aa8.58□□□□□ -1.04
SCAF1-203ENST00000598359 IGHV3OR16-9A0A0B4J2B5 98 aa8.57□□□□□ -1.04
SCAF1-203ENST00000598359 A0A0J9YXY3 114 aa8.57□□□□□ -1.04
SCAF1-203ENST00000598359 A0A1W2PNN7 141 aa8.57□□□□□ -1.04
SCAF1-203ENST00000598359 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
SCAF1-203ENST00000598359 APOMO95445 188 aa8.57□□□□□ -1.04
SCAF1-203ENST00000598359 RPL18AQ02543 176 aaKnown RBP8.57□□□□□ -1.04
SCAF1-203ENST00000598359 C2orf48Q96LS8 159 aa8.57□□□□□ -1.04
SCAF1-203ENST00000598359 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
SCAF1-203ENST00000598359 TMEM238LA0A1B0GVL6 79 aa8.56□□□□□ -1.04
SCAF1-203ENST00000598359 A6NJY4 79 aa8.56□□□□□ -1.04
SCAF1-203ENST00000598359 TMEM238C9JI98 176 aa8.56□□□□□ -1.04
SCAF1-203ENST00000598359 TIMM17BO60830 172 aa8.56□□□□□ -1.04
SCAF1-203ENST00000598359 LITAFQ99732 161 aa8.56□□□□□ -1.04
SCAF1-203ENST00000598359 NDUFA12Q9UI09 145 aa8.56□□□□□ -1.04
SCAF1-203ENST00000598359 NDUFA1O15239 70 aa8.55□□□□□ -1.04
SCAF1-203ENST00000598359 SRSF9Q13242 221 aaKnown RBP eCLIP8.55□□□□□ -1.04
SCAF1-203ENST00000598359 UBE2V1Q13404 147 aa8.55□□□□□ -1.04
SCAF1-203ENST00000598359 C10orf25Q5T742 122 aa8.55□□□□□ -1.04
SCAF1-203ENST00000598359 SPANXDQ9BXN6 97 aa8.55□□□□□ -1.04
SCAF1-203ENST00000598359 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
SCAF1-203ENST00000598359 SPANXCQ9NY87 97 aa8.55□□□□□ -1.04
SCAF1-203ENST00000598359 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
SCAF1-203ENST00000598359 C9orf116Q5BN46 136 aaPredicted RBP8.53□□□□□ -1.04
SCAF1-203ENST00000598359 LINC01561Q8N1V8 128 aa8.53□□□□□ -1.04
SCAF1-203ENST00000598359 TNXBP22105 4242 aa8.52□□□□□ -1.05
SCAF1-203ENST00000598359 A0A1W2PPM0 123 aa8.52□□□□□ -1.05
SCAF1-203ENST00000598359 K7ERJ3 54 aa8.52□□□□□ -1.05
SCAF1-203ENST00000598359 VAMP3Q15836 100 aa8.52□□□□□ -1.05
SCAF1-203ENST00000598359 A0A087WZ39 114 aa8.51□□□□□ -1.05
SCAF1-203ENST00000598359 H3BUT2 72 aa8.51□□□□□ -1.05
SCAF1-203ENST00000598359 RNF151Q2KHN1 245 aa8.51□□□□□ -1.05
SCAF1-203ENST00000598359 PHF5AQ7RTV0 110 aaKnown RBP8.51□□□□□ -1.05
SCAF1-203ENST00000598359 RAB37Q96AX2 223 aa8.51□□□□□ -1.05
SCAF1-203ENST00000598359 ZNF625Q96I27 306 aaPredicted RBP8.51□□□□□ -1.05
SCAF1-203ENST00000598359 PPDPFQ9H3Y8 114 aa8.51□□□□□ -1.05
SCAF1-203ENST00000598359 C6orf48Q9UBA6 75 aa8.51□□□□□ -1.05
SCAF1-203ENST00000598359 FAM168BA1KXE4 195 aa8.5□□□□□ -1.05
SCAF1-203ENST00000598359 HERV-K104P63124 156 aa8.5□□□□□ -1.05
SCAF1-203ENST00000598359 KIAA0087Q14695 138 aa8.5□□□□□ -1.05
SCAF1-203ENST00000598359 Q6ZRP5 223 aa8.5□□□□□ -1.05
SCAF1-203ENST00000598359 LRP2P98164 4655 aa8.5□□□□□ -1.05
SCAF1-203ENST00000598359 A0A0B4J2C4 111 aa8.49□□□□□ -1.05
SCAF1-203ENST00000598359 K7EP34 96 aa8.49□□□□□ -1.05
SCAF1-203ENST00000598359 IFITM1P13164 125 aa8.49□□□□□ -1.05
SCAF1-203ENST00000598359 RPL24P83731 157 aaKnown RBP8.49□□□□□ -1.05
SCAF1-203ENST00000598359 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
SCAF1-203ENST00000598359 GAGE2EQ4V326 116 aa8.48□□□□□ -1.05
SCAF1-203ENST00000598359 LINC01600Q96MT4 127 aa8.48□□□□□ -1.05
SCAF1-203ENST00000598359 GAGE2DQ9UEU5 116 aa8.48□□□□□ -1.05
SCAF1-203ENST00000598359 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
SCAF1-203ENST00000598359 F8WDY8 70 aa8.47□□□□□ -1.05
SCAF1-203ENST00000598359 CFC1BP0CG36 223 aa8.47□□□□□ -1.05
SCAF1-203ENST00000598359 CFC1P0CG37 223 aa8.47□□□□□ -1.05
SCAF1-203ENST00000598359 FABP2P12104 132 aa8.47□□□□□ -1.05
SCAF1-203ENST00000598359 ADAMTSL4-AS1Q5T5F5 129 aa8.47□□□□□ -1.05
SCAF1-203ENST00000598359 SFTA2Q6UW10 78 aa8.47□□□□□ -1.05
SCAF1-203ENST00000598359 SPINK6Q6UWN8 80 aa8.47□□□□□ -1.05
SCAF1-203ENST00000598359 GTF2H5Q6ZYL4 71 aa8.47□□□□□ -1.05
SCAF1-203ENST00000598359 FAM19A5Q7Z5A7 132 aaPredicted RBP8.47□□□□□ -1.05
SCAF1-203ENST00000598359 MUSTN1Q8IVN3 82 aa8.47□□□□□ -1.05
SCAF1-203ENST00000598359 COX7B2Q8TF08 81 aa8.47□□□□□ -1.05
SCAF1-203ENST00000598359 A4D1N5 150 aa8.46□□□□□ -1.06
SCAF1-203ENST00000598359 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.06
SCAF1-203ENST00000598359 NAA38Q9BRA0 125 aaKnown RBP8.46□□□□□ -1.06
SCAF1-203ENST00000598359 GAGE10A6NGK3 116 aa8.45□□□□□ -1.06
SCAF1-203ENST00000598359 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
SCAF1-203ENST00000598359 TLX1NBP0CAT3 122 aa8.45□□□□□ -1.06
SCAF1-203ENST00000598359 TOMM7Q9P0U1 55 aa8.45□□□□□ -1.06
SCAF1-203ENST00000598359 SPCS1Q9Y6A9 102 aa8.45□□□□□ -1.06
SCAF1-203ENST00000598359 TSPAN13O95857 204 aa8.44□□□□□ -1.06
SCAF1-203ENST00000598359 C1orf137Q5JT78 98 aa8.44□□□□□ -1.06
SCAF1-203ENST00000598359 REG3GQ6UW15 175 aa8.44□□□□□ -1.06
SCAF1-203ENST00000598359 KRTAP7-1Q8IUC3 87 aa8.44□□□□□ -1.06
SCAF1-203ENST00000598359 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
SCAF1-203ENST00000598359 Q8IZM0 81 aa8.43□□□□□ -1.06
SCAF1-203ENST00000598359 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
SCAF1-203ENST00000598359 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
SCAF1-203ENST00000598359 PRSS2P07478 247 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms