RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 NDUFA12Q9UI09 145 aa12.75□□□□□ -0.37
PAF1-207ENST00000598127 MYMXA0A1B0GTQ4 84 aa12.74□□□□□ -0.37
PAF1-207ENST00000598127 FAT3Q8TDW7 4589 aa12.74□□□□□ -0.37
PAF1-207ENST00000598127 PET117Q6UWS5 81 aa12.73□□□□□ -0.37
PAF1-207ENST00000598127 LINC00167Q96N53 147 aa12.73□□□□□ -0.37
PAF1-207ENST00000598127 LINC00587B1AMM8 73 aa12.72□□□□□ -0.37
PAF1-207ENST00000598127 NKAPP1Q8N9T2 125 aa12.72□□□□□ -0.37
PAF1-207ENST00000598127 J3QQQ9 107 aa12.71□□□□□ -0.37
PAF1-207ENST00000598127 TSPEAR-AS2P59090 65 aa12.71□□□□□ -0.37
PAF1-207ENST00000598127 LINC01545Q5VT33 79 aa12.71□□□□□ -0.37
PAF1-207ENST00000598127 REG3GQ6UW15 175 aa12.71□□□□□ -0.37
PAF1-207ENST00000598127 A0A0U1RRA0 63 aa12.7□□□□□ -0.38
PAF1-207ENST00000598127 C3orf79P0CE67 100 aa12.7□□□□□ -0.38
PAF1-207ENST00000598127 SMIM13P0DJ93 91 aa12.7□□□□□ -0.38
PAF1-207ENST00000598127 RPL24P83731 157 aaKnown RBP12.7□□□□□ -0.38
PAF1-207ENST00000598127 MEIG1Q5JSS6 88 aa12.7□□□□□ -0.38
PAF1-207ENST00000598127 VPREB1P12018 145 aa12.69□□□□□ -0.38
PAF1-207ENST00000598127 RPL37AP8A6NKH3 93 aa12.68□□□□□ -0.38
PAF1-207ENST00000598127 NMUP48645 174 aa12.68□□□□□ -0.38
PAF1-207ENST00000598127 LINC01600Q96MT4 127 aa12.68□□□□□ -0.38
PAF1-207ENST00000598127 GAGE10A6NGK3 116 aa12.67□□□□□ -0.38
PAF1-207ENST00000598127 E9PLD3 99 aa12.67□□□□□ -0.38
PAF1-207ENST00000598127 MT1HL1P0DM35 61 aa12.67□□□□□ -0.38
PAF1-207ENST00000598127 LGALS3P17931 250 aaKnown RBP12.67□□□□□ -0.38
PAF1-207ENST00000598127 DIRC1Q969H9 104 aa12.67□□□□□ -0.38
PAF1-207ENST00000598127 HERC1Q15751 4861 aa12.66□□□□□ -0.38
PAF1-207ENST00000598127 KRTDAPP60985 99 aa12.65□□□□□ -0.38
PAF1-207ENST00000598127 MIR7-3HGQ8N6C7 128 aa12.65□□□□□ -0.38
PAF1-207ENST00000598127 Q8NDZ9 215 aa12.64□□□□□ -0.39
PAF1-207ENST00000598127 H0Y9J4 135 aa12.62□□□□□ -0.39
PAF1-207ENST00000598127 ZNF861PO60384 105 aa12.62□□□□□ -0.39
PAF1-207ENST00000598127 BCE1O60756 84 aa12.62□□□□□ -0.39
PAF1-207ENST00000598127 IGLV1-50A0A075B6I6 118 aa12.61□□□□□ -0.39
PAF1-207ENST00000598127 IGKV2-28A0A075B6P5 120 aa12.59□□□□□ -0.39
PAF1-207ENST00000598127 C20orf202A1L168 122 aa12.59□□□□□ -0.39
PAF1-207ENST00000598127 IGKV2D-28P01615 120 aa12.59□□□□□ -0.39
PAF1-207ENST00000598127 BOD1L2Q8IYS8 172 aa12.59□□□□□ -0.39
PAF1-207ENST00000598127 LOC107984156A0A0G2JMH3 177 aa12.58□□□□□ -0.4
PAF1-207ENST00000598127 M0R378 163 aa12.58□□□□□ -0.4
PAF1-207ENST00000598127 KRTAP10-8P60410 259 aa12.58□□□□□ -0.4
PAF1-207ENST00000598127 ARL17AQ8IVW1 177 aa12.58□□□□□ -0.4
PAF1-207ENST00000598127 HIST3H2BBQ8N257 126 aa12.58□□□□□ -0.4
PAF1-207ENST00000598127 A0A0J9YXY3 114 aa12.57□□□□□ -0.4
PAF1-207ENST00000598127 RPL28P46779 137 aaKnown RBP12.57□□□□□ -0.4
PAF1-207ENST00000598127 S100A6P06703 90 aa12.56□□□□□ -0.4
PAF1-207ENST00000598127 DAND5Q8N907 189 aa12.56□□□□□ -0.4
PAF1-207ENST00000598127 S100A2P29034 98 aa12.55□□□□□ -0.4
PAF1-207ENST00000598127 AKR1D1P51857 326 aa12.55□□□□□ -0.4
PAF1-207ENST00000598127 IGKV2D-26A0A0A0MRZ7 120 aa12.54□□□□□ -0.4
PAF1-207ENST00000598127 HIST1H2BLQ99880 126 aa12.54□□□□□ -0.4
PAF1-207ENST00000598127 TMEM126AQ9H061 195 aa12.53□□□□□ -0.4
PAF1-207ENST00000598127 TMEM238C9JI98 176 aa12.52□□□□□ -0.41
PAF1-207ENST00000598127 KRTAP13-1Q8IUC0 172 aa12.52□□□□□ -0.41
PAF1-207ENST00000598127 TNXBP22105 4242 aa12.51□□□□□ -0.41
PAF1-207ENST00000598127 NCR3O14931 201 aa12.51□□□□□ -0.41
PAF1-207ENST00000598127 KRTAP1-4P0C5Y4 121 aa12.51□□□□□ -0.41
PAF1-207ENST00000598127 UBE2AP49459 152 aa12.51□□□□□ -0.41
PAF1-207ENST00000598127 ADAMTSL4-AS1Q5T5F5 129 aa12.51□□□□□ -0.41
PAF1-207ENST00000598127 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
PAF1-207ENST00000598127 ZNF815PA8K554 130 aa12.5□□□□□ -0.41
PAF1-207ENST00000598127 TIMM17BO60830 172 aa12.49□□□□□ -0.41
PAF1-207ENST00000598127 ATOH7Q8N100 152 aa12.49□□□□□ -0.41
PAF1-207ENST00000598127 SNRPEP62304 92 aaKnown RBP12.48□□□□□ -0.41
PAF1-207ENST00000598127 ANKRD39Q53RE8 183 aa12.48□□□□□ -0.41
PAF1-207ENST00000598127 FAM19A1Q7Z5A9 133 aa12.48□□□□□ -0.41
PAF1-207ENST00000598127 TTTY13Q9BZ97 58 aa12.48□□□□□ -0.41
PAF1-207ENST00000598127 TRBV10-2A0A0K0K1G8 114 aa12.47□□□□□ -0.41
PAF1-207ENST00000598127 NDUFC2O95298 119 aa12.47□□□□□ -0.41
PAF1-207ENST00000598127 LITAFQ99732 161 aa12.47□□□□□ -0.41
PAF1-207ENST00000598127 SOSTDC1Q6X4U4 206 aa12.46□□□□□ -0.41
PAF1-207ENST00000598127 PRR26Q8N8Z3 221 aa12.46□□□□□ -0.41
PAF1-207ENST00000598127 KCNQ1DNQ9H478 68 aa12.46□□□□□ -0.41
PAF1-207ENST00000598127 PRYO14603 147 aa12.45□□□□□ -0.42
PAF1-207ENST00000598127 SPANXB1Q9NS25 103 aaPredicted RBP12.45□□□□□ -0.42
PAF1-207ENST00000598127 TRBV10-3A0A0K0K1G6 114 aa12.44□□□□□ -0.42
PAF1-207ENST00000598127 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
PAF1-207ENST00000598127 EIF4EBP3O60516 100 aaPredicted RBP12.44□□□□□ -0.42
PAF1-207ENST00000598127 NPC2P61916 151 aa12.44□□□□□ -0.42
PAF1-207ENST00000598127 PRLHP81277 87 aa12.44□□□□□ -0.42
PAF1-207ENST00000598127 LINC00308Q8TCZ7 52 aa12.42□□□□□ -0.42
PAF1-207ENST00000598127 DDTP30046 118 aa12.41□□□□□ -0.42
PAF1-207ENST00000598127 SPRR1AP35321 89 aa12.41□□□□□ -0.42
PAF1-207ENST00000598127 S100A12P80511 92 aa12.41□□□□□ -0.42
PAF1-207ENST00000598127 LINC00337Q8N6G1 96 aa12.41□□□□□ -0.42
PAF1-207ENST00000598127 RPL13AP40429 203 aaKnown RBP12.4□□□□□ -0.42
PAF1-207ENST00000598127 SCGB1D4Q6XE38 83 aa12.4□□□□□ -0.42
PAF1-207ENST00000598127 KRTAP4-16G5E9R7 235 aaPredicted RBP12.38□□□□□ -0.43
PAF1-207ENST00000598127 S100A7L2Q5SY68 101 aa12.38□□□□□ -0.43
PAF1-207ENST00000598127 PCP2Q8IVA1 136 aa12.38□□□□□ -0.43
PAF1-207ENST00000598127 SPANXCQ9NY87 97 aa12.38□□□□□ -0.43
PAF1-207ENST00000598127 IGLV6-57P01721 117 aa12.37□□□□□ -0.43
PAF1-207ENST00000598127 SPANXDQ9BXN6 97 aa12.37□□□□□ -0.43
PAF1-207ENST00000598127 ETDCA0A1B0GVM5 59 aa12.36□□□□□ -0.43
PAF1-207ENST00000598127 HSBP1L1C9JCN9 74 aa12.36□□□□□ -0.43
PAF1-207ENST00000598127 HIGD2AQ9BW72 106 aa12.35□□□□□ -0.43
PAF1-207ENST00000598127 SCGB1D1O95968 90 aa12.34□□□□□ -0.43
PAF1-207ENST00000598127 CRYGAP11844 174 aa12.34□□□□□ -0.43
PAF1-207ENST00000598127 Q6ZVH6 145 aa12.33□□□□□ -0.44
PAF1-207ENST00000598127 ANAPC11Q9NYG5 84 aa12.33□□□□□ -0.44
PAF1-207ENST00000598127 A0A087X002 238 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms