RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 C20orf197Q8N268 126 aa11.84□□□□□ -0.51
ARHGEF1-213ENST00000595897 TRBV10-3A0A0K0K1G6 114 aa11.83□□□□□ -0.52
ARHGEF1-213ENST00000595897 LINC00482Q8N8I6 264 aa11.83□□□□□ -0.52
ARHGEF1-213ENST00000595897 LYRM9A8MSI8 78 aa11.82□□□□□ -0.52
ARHGEF1-213ENST00000595897 DEFB135Q30KP9 77 aa11.82□□□□□ -0.52
ARHGEF1-213ENST00000595897 Q6ZQY7 126 aa11.82□□□□□ -0.52
ARHGEF1-213ENST00000595897 CYSRT1A8MQ03 144 aa11.81□□□□□ -0.52
ARHGEF1-213ENST00000595897 DAD1P61803 113 aa11.81□□□□□ -0.52
ARHGEF1-213ENST00000595897 C5orf47Q569G3 176 aa11.8□□□□□ -0.52
ARHGEF1-213ENST00000595897 M0R2N4 97 aa11.79□□□□□ -0.52
ARHGEF1-213ENST00000595897 HTN3P15516 51 aa11.79□□□□□ -0.52
ARHGEF1-213ENST00000595897 LOC110117498A0A087WWA1 95 aa11.79□□□□□ -0.52
ARHGEF1-213ENST00000595897 LINC01547P58512 204 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF1-213ENST00000595897 OXTP01178 125 aa11.77□□□□□ -0.52
ARHGEF1-213ENST00000595897 IGLV6-57P01721 117 aa11.77□□□□□ -0.53
ARHGEF1-213ENST00000595897 Q6ZVQ6 151 aa11.77□□□□□ -0.53
ARHGEF1-213ENST00000595897 KLK12Q9UKR0 248 aa11.77□□□□□ -0.53
ARHGEF1-213ENST00000595897 KRTAP1-1Q07627 177 aa11.76□□□□□ -0.53
ARHGEF1-213ENST00000595897 XAGE1AQ9HD64 81 aa11.76□□□□□ -0.53
ARHGEF1-213ENST00000595897 A0A0J9YWU9 116 aa11.75□□□□□ -0.53
ARHGEF1-213ENST00000595897 IGHV4-30-4P0DP06 118 aa11.75□□□□□ -0.53
ARHGEF1-213ENST00000595897 MUC7Q8TAX7 377 aa11.75□□□□□ -0.53
ARHGEF1-213ENST00000595897 SPATA3Q8NHX4 192 aa11.75□□□□□ -0.53
ARHGEF1-213ENST00000595897 NDUFC2-KCTD14E9PQ53 114 aa11.74□□□□□ -0.53
ARHGEF1-213ENST00000595897 DIRC1Q969H9 104 aa11.74□□□□□ -0.53
ARHGEF1-213ENST00000595897 PDE6GP18545 87 aa11.73□□□□□ -0.53
ARHGEF1-213ENST00000595897 KRTAP10-3P60369 221 aa11.72□□□□□ -0.53
ARHGEF1-213ENST00000595897 CELA1Q9UNI1 258 aa11.72□□□□□ -0.53
ARHGEF1-213ENST00000595897 TRAV7A0A075B6U4 112 aa11.72□□□□□ -0.53
ARHGEF1-213ENST00000595897 LELP1Q5T871 98 aa11.71□□□□□ -0.53
ARHGEF1-213ENST00000595897 VWFP04275 2813 aa11.71□□□□□ -0.54
ARHGEF1-213ENST00000595897 FAM236DA0A1B0GTK5 79 aa11.7□□□□□ -0.54
ARHGEF1-213ENST00000595897 FAM236CP0DP71 79 aa11.7□□□□□ -0.54
ARHGEF1-213ENST00000595897 H3BQ85 93 aa11.7□□□□□ -0.54
ARHGEF1-213ENST00000595897 TRAV10A0A0B4J240 114 aa11.7□□□□□ -0.54
ARHGEF1-213ENST00000595897 ZNF73O43830 326 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF1-213ENST00000595897 APOC4P55056 127 aa11.69□□□□□ -0.54
ARHGEF1-213ENST00000595897 C4orf26Q17RF5 130 aa11.69□□□□□ -0.54
ARHGEF1-213ENST00000595897 C6orf48Q9UBA6 75 aa11.69□□□□□ -0.54
ARHGEF1-213ENST00000595897 SCXQ7RTU7 201 aa11.69□□□□□ -0.54
ARHGEF1-213ENST00000595897 COX7BP24311 80 aa11.68□□□□□ -0.54
ARHGEF1-213ENST00000595897 C9orf66Q5T8R8 295 aa11.68□□□□□ -0.54
ARHGEF1-213ENST00000595897 ITPR2Q14571 2701 aa11.68□□□□□ -0.54
ARHGEF1-213ENST00000595897 CXCL6P80162 114 aa11.67□□□□□ -0.54
ARHGEF1-213ENST00000595897 BCE1O60756 84 aa11.67□□□□□ -0.54
ARHGEF1-213ENST00000595897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF1-213ENST00000595897 PRR34Q9NV39 138 aa11.67□□□□□ -0.54
ARHGEF1-213ENST00000595897 SNURFQ9Y675 71 aa11.67□□□□□ -0.54
ARHGEF1-213ENST00000595897 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
ARHGEF1-213ENST00000595897 H7BZZ5 65 aa11.66□□□□□ -0.54
ARHGEF1-213ENST00000595897 GVQW2A0A096LPI5 108 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF1-213ENST00000595897 HRCT1Q6UXD1 115 aa11.65□□□□□ -0.54
ARHGEF1-213ENST00000595897 HIGD2BQ4VC39 106 aa11.64□□□□□ -0.55
ARHGEF1-213ENST00000595897 Q8NAQ8 132 aa11.64□□□□□ -0.55
ARHGEF1-213ENST00000595897 Q5XG85 94 aa11.64□□□□□ -0.55
ARHGEF1-213ENST00000595897 CAMK2N2Q96S95 79 aa11.64□□□□□ -0.55
ARHGEF1-213ENST00000595897 TRBV7-4A0A0J9YYF1 115 aa11.63□□□□□ -0.55
ARHGEF1-213ENST00000595897 MIFP14174 115 aa11.63□□□□□ -0.55
ARHGEF1-213ENST00000595897 SMR3AQ99954 134 aa11.63□□□□□ -0.55
ARHGEF1-213ENST00000595897 ELOF1P60002 83 aaKnown RBP11.62□□□□□ -0.55
ARHGEF1-213ENST00000595897 RMI2Q96E14 147 aa11.62□□□□□ -0.55
ARHGEF1-213ENST00000595897 ANK3Q12955 4377 aaKnown RBP11.62□□□□□ -0.55
ARHGEF1-213ENST00000595897 KLKP1Q107X0 134 aa11.62□□□□□ -0.55
ARHGEF1-213ENST00000595897 PDZD2O15018 2839 aa11.61□□□□□ -0.55
ARHGEF1-213ENST00000595897 F8WEM9 126 aa11.59□□□□□ -0.55
ARHGEF1-213ENST00000595897 TM2D3Q9BRN9 247 aa11.59□□□□□ -0.55
ARHGEF1-213ENST00000595897 SERP1Q9Y6X1 66 aa11.59□□□□□ -0.55
ARHGEF1-213ENST00000595897 NOTCH2Q04721 2471 aa11.59□□□□□ -0.55
ARHGEF1-213ENST00000595897 VPREB1P12018 145 aa11.58□□□□□ -0.56
ARHGEF1-213ENST00000595897 TENM4Q6N022 2769 aa11.58□□□□□ -0.56
ARHGEF1-213ENST00000595897 M0R378 163 aa11.56□□□□□ -0.56
ARHGEF1-213ENST00000595897 TRBV7-6A0A0J9YX20 115 aa11.56□□□□□ -0.56
ARHGEF1-213ENST00000595897 Q6ZRU5 148 aa11.55□□□□□ -0.56
ARHGEF1-213ENST00000595897 FASNP49327 2511 aaKnown RBP11.55□□□□□ -0.56
ARHGEF1-213ENST00000595897 EGFEM1PQ0D2K5 195 aa11.55□□□□□ -0.56
ARHGEF1-213ENST00000595897 WFDC10BQ8IUB3 73 aa11.55□□□□□ -0.56
ARHGEF1-213ENST00000595897 Q8N9L7 120 aa11.54□□□□□ -0.56
ARHGEF1-213ENST00000595897 BPY2O14599 106 aa11.53□□□□□ -0.56
ARHGEF1-213ENST00000595897 NREPQ16612 68 aa11.52□□□□□ -0.56
ARHGEF1-213ENST00000595897 UNC79Q9P2D8 2635 aa11.52□□□□□ -0.56
ARHGEF1-213ENST00000595897 LINC00528Q8N1L1 170 aa11.52□□□□□ -0.57
ARHGEF1-213ENST00000595897 NDUFC1O43677 76 aa11.5□□□□□ -0.57
ARHGEF1-213ENST00000595897 TENM1Q9UKZ4 2725 aa11.5□□□□□ -0.57
ARHGEF1-213ENST00000595897 ATRQ13535 2644 aa11.49□□□□□ -0.57
ARHGEF1-213ENST00000595897 DEFB105AQ8NG35 78 aa11.49□□□□□ -0.57
ARHGEF1-213ENST00000595897 HIVEP1P15822 2718 aa11.49□□□□□ -0.57
ARHGEF1-213ENST00000595897 C3orf84H3BNL1 204 aa11.49□□□□□ -0.57
ARHGEF1-213ENST00000595897 WIPF1O43516 503 aa11.48□□□□□ -0.57
ARHGEF1-213ENST00000595897 KPRPQ5T749 579 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF1-213ENST00000595897 EPM2AB3EWF7 344 aa11.48□□□□□ -0.57
ARHGEF1-213ENST00000595897 TMEM254Q8TBM7 123 aa11.48□□□□□ -0.57
ARHGEF1-213ENST00000595897 C15orf56Q8N910 161 aa11.47□□□□□ -0.57
ARHGEF1-213ENST00000595897 Q6ZRP5 223 aa11.46□□□□□ -0.57
ARHGEF1-213ENST00000595897 C1orf43Q9BWL3 253 aa11.46□□□□□ -0.58
ARHGEF1-213ENST00000595897 HELZ2Q9BYK8 2649 aaKnown RBP11.46□□□□□ -0.58
ARHGEF1-213ENST00000595897 NKAPP1Q8N9T2 125 aa11.45□□□□□ -0.58
ARHGEF1-213ENST00000595897 KRTAP26-1Q6PEX3 210 aa11.44□□□□□ -0.58
ARHGEF1-213ENST00000595897 IGKV2D-24A0A075B6R9 120 aa11.44□□□□□ -0.58
ARHGEF1-213ENST00000595897 SMIM26A0A096LP01 95 aa11.44□□□□□ -0.58
ARHGEF1-213ENST00000595897 IGKV4-1P06312 121 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms