RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 PPDPFQ9H3Y8 114 aa8.48□□□□□ -1.05
XRCC1-205ENST00000595789 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
XRCC1-205ENST00000595789 SPRR4Q96PI1 79 aa8.47□□□□□ -1.05
XRCC1-205ENST00000595789 LINC00614P0C842 121 aa8.46□□□□□ -1.06
XRCC1-205ENST00000595789 SPAG11AQ6PDA7 123 aa8.46□□□□□ -1.06
XRCC1-205ENST00000595789 C18orf32Q8TCD1 76 aa8.46□□□□□ -1.06
XRCC1-205ENST00000595789 HIGD2AQ9BW72 106 aa8.46□□□□□ -1.06
XRCC1-205ENST00000595789 HBDP02042 147 aa8.45□□□□□ -1.06
XRCC1-205ENST00000595789 IFITM2Q01629 132 aa8.45□□□□□ -1.06
XRCC1-205ENST00000595789 BAGE3Q86Y29 109 aa8.45□□□□□ -1.06
XRCC1-205ENST00000595789 PMCHL1Q16048 86 aa8.44□□□□□ -1.06
XRCC1-205ENST00000595789 C10orf91Q5T1B1 145 aa8.44□□□□□ -1.06
XRCC1-205ENST00000595789 SFTA2Q6UW10 78 aa8.44□□□□□ -1.06
XRCC1-205ENST00000595789 TMEM170BQ5T4T1 132 aa8.43□□□□□ -1.06
XRCC1-205ENST00000595789 LINC00158P58513 81 aa8.42□□□□□ -1.06
XRCC1-205ENST00000595789 FP248Q71RG6 208 aaPredicted RBP8.42□□□□□ -1.06
XRCC1-205ENST00000595789 KRTAP9-6A0A140TA67 174 aa8.41□□□□□ -1.06
XRCC1-205ENST00000595789 TRAPPC1Q9Y5R8 145 aa8.41□□□□□ -1.06
XRCC1-205ENST00000595789 A0A0U1RRA0 63 aa8.4□□□□□ -1.06
XRCC1-205ENST00000595789 KRTAP4-16G5E9R7 235 aaPredicted RBP8.4□□□□□ -1.06
XRCC1-205ENST00000595789 SPRR1AP35321 89 aa8.4□□□□□ -1.06
XRCC1-205ENST00000595789 RHEBQ15382 184 aa8.4□□□□□ -1.06
XRCC1-205ENST00000595789 KRTAP13-3Q3SY46 172 aa8.4□□□□□ -1.06
XRCC1-205ENST00000595789 DAND5Q8N907 189 aa8.4□□□□□ -1.06
XRCC1-205ENST00000595789 RPS10P5Q9NQ39 176 aa8.4□□□□□ -1.06
XRCC1-205ENST00000595789 TMEM223A0PJW6 202 aa8.39□□□□□ -1.07
XRCC1-205ENST00000595789 KCNQ1DNQ9H478 68 aa8.39□□□□□ -1.07
XRCC1-205ENST00000595789 CHTOPQ9Y3Y2 248 aaKnown RBP8.39□□□□□ -1.07
XRCC1-205ENST00000595789 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
XRCC1-205ENST00000595789 PRYO14603 147 aa8.38□□□□□ -1.07
XRCC1-205ENST00000595789 SMIM13P0DJ93 91 aa8.38□□□□□ -1.07
XRCC1-205ENST00000595789 LINC00337Q8N6G1 96 aa8.38□□□□□ -1.07
XRCC1-205ENST00000595789 Q8NBF4 154 aa8.38□□□□□ -1.07
XRCC1-205ENST00000595789 SMCR5Q8TEV8 140 aa8.38□□□□□ -1.07
XRCC1-205ENST00000595789 ASB16-AS1Q495Z4 193 aa8.37□□□□□ -1.07
XRCC1-205ENST00000595789 C4orf48Q5BLP8 95 aa8.37□□□□□ -1.07
XRCC1-205ENST00000595789 COMMD7Q86VX2 200 aa8.37□□□□□ -1.07
XRCC1-205ENST00000595789 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
XRCC1-205ENST00000595789 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
XRCC1-205ENST00000595789 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
XRCC1-205ENST00000595789 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
XRCC1-205ENST00000595789 NCR3O14931 201 aa8.34□□□□□ -1.07
XRCC1-205ENST00000595789 SPINK1P00995 79 aa8.34□□□□□ -1.07
XRCC1-205ENST00000595789 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
XRCC1-205ENST00000595789 TRBV10-3A0A0K0K1G6 114 aa8.33□□□□□ -1.08
XRCC1-205ENST00000595789 IFI27L1Q96BM0 104 aa8.32□□□□□ -1.08
XRCC1-205ENST00000595789 ETDCA0A1B0GVM5 59 aa8.31□□□□□ -1.08
XRCC1-205ENST00000595789 B5MCH6 92 aa8.31□□□□□ -1.08
XRCC1-205ENST00000595789 ATP6V1G1O75348 118 aa8.31□□□□□ -1.08
XRCC1-205ENST00000595789 ERC2-IT1O76042 136 aa8.31□□□□□ -1.08
XRCC1-205ENST00000595789 HERV-K104P63124 156 aa8.31□□□□□ -1.08
XRCC1-205ENST00000595789 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
XRCC1-205ENST00000595789 LOC107984156A0A0G2JMH3 177 aa8.3□□□□□ -1.08
XRCC1-205ENST00000595789 GAGE2AQ6NT46 116 aa8.3□□□□□ -1.08
XRCC1-205ENST00000595789 ARL17AQ8IVW1 177 aa8.3□□□□□ -1.08
XRCC1-205ENST00000595789 CHCHD1Q96BP2 118 aaKnown RBP8.3□□□□□ -1.08
XRCC1-205ENST00000595789 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
XRCC1-205ENST00000595789 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
XRCC1-205ENST00000595789 Q8N377 158 aa8.29□□□□□ -1.08
XRCC1-205ENST00000595789 LINC00587B1AMM8 73 aa8.28□□□□□ -1.08
XRCC1-205ENST00000595789 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
XRCC1-205ENST00000595789 YPEL4Q96NS1 127 aa8.28□□□□□ -1.08
XRCC1-205ENST00000595789 Q9BRP9 147 aa8.28□□□□□ -1.08
XRCC1-205ENST00000595789 MOBPQ13875 183 aa8.27□□□□□ -1.09
XRCC1-205ENST00000595789 MYMXA0A1B0GTQ4 84 aa8.26□□□□□ -1.09
XRCC1-205ENST00000595789 APOC3P02656 99 aa8.26□□□□□ -1.09
XRCC1-205ENST00000595789 LINC01547P58512 204 aaPredicted RBP8.26□□□□□ -1.09
XRCC1-205ENST00000595789 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
XRCC1-205ENST00000595789 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
XRCC1-205ENST00000595789 IGLV9-49A0A0B4J1Y8 123 aa8.25□□□□□ -1.09
XRCC1-205ENST00000595789 TRBV10-2A0A0K0K1G8 114 aa8.25□□□□□ -1.09
XRCC1-205ENST00000595789 FAM19A2Q8N3H0 131 aa8.25□□□□□ -1.09
XRCC1-205ENST00000595789 MAP1LC3CQ9BXW4 147 aa8.25□□□□□ -1.09
XRCC1-205ENST00000595789 DDTP30046 118 aa8.24□□□□□ -1.09
XRCC1-205ENST00000595789 LCE2DQ5TA82 110 aaPredicted RBP8.24□□□□□ -1.09
XRCC1-205ENST00000595789 Q6ZRX8 168 aa8.24□□□□□ -1.09
XRCC1-205ENST00000595789 SLC25A20O43772 301 aa8.23□□□□□ -1.09
XRCC1-205ENST00000595789 SNAPINO95295 136 aa8.23□□□□□ -1.09
XRCC1-205ENST00000595789 S100A12P80511 92 aa8.23□□□□□ -1.09
XRCC1-205ENST00000595789 XP32Q5T750 250 aa8.23□□□□□ -1.09
XRCC1-205ENST00000595789 LEPROTO15243 131 aa8.22□□□□□ -1.09
XRCC1-205ENST00000595789 HSBP1O75506 76 aa8.21□□□□□ -1.1
XRCC1-205ENST00000595789 IGLV6-57P01721 117 aa8.21□□□□□ -1.1
XRCC1-205ENST00000595789 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
XRCC1-205ENST00000595789 SVBPQ8N300 66 aa8.21□□□□□ -1.1
XRCC1-205ENST00000595789 SPANXB1Q9NS25 103 aaPredicted RBP8.2□□□□□ -1.1
XRCC1-205ENST00000595789 J3QQQ9 107 aa8.19□□□□□ -1.1
XRCC1-205ENST00000595789 LINC00310P59036 64 aa8.19□□□□□ -1.1
XRCC1-205ENST00000595789 H0Y8G0 127 aa8.18□□□□□ -1.1
XRCC1-205ENST00000595789 EIF4EBP3O60516 100 aaPredicted RBP8.18□□□□□ -1.1
XRCC1-205ENST00000595789 NDUFC2O95298 119 aa8.18□□□□□ -1.1
XRCC1-205ENST00000595789 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
XRCC1-205ENST00000595789 KRTAP19-2Q3LHN2 52 aa8.17□□□□□ -1.1
XRCC1-205ENST00000595789 SOSTDC1Q6X4U4 206 aa8.17□□□□□ -1.1
XRCC1-205ENST00000595789 LEPROTL1O95214 131 aa8.16□□□□□ -1.1
XRCC1-205ENST00000595789 PLNP26678 52 aa8.16□□□□□ -1.1
XRCC1-205ENST00000595789 NMUP48645 174 aa8.16□□□□□ -1.1
XRCC1-205ENST00000595789 ST20-AS1Q8NBB2 130 aa8.16□□□□□ -1.1
XRCC1-205ENST00000595789 TRAV23DV6A0A075B6W5 121 aa8.15□□□□□ -1.1
XRCC1-205ENST00000595789 JOSD1Q15040 202 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms