RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 PLEKHB2Q96CS7 222 aa13.39□□□□□ -0.27
HOMER3-206ENST00000594439 LINC00167Q96N53 147 aa13.39□□□□□ -0.27
HOMER3-206ENST00000594439 LINC00158P58513 81 aa13.38□□□□□ -0.27
HOMER3-206ENST00000594439 HERVK_113P61574 105 aa13.38□□□□□ -0.27
HOMER3-206ENST00000594439 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
HOMER3-206ENST00000594439 MT1HL1P0DM35 61 aa13.37□□□□□ -0.27
HOMER3-206ENST00000594439 VPREB1P12018 145 aa13.37□□□□□ -0.27
HOMER3-206ENST00000594439 LINC01545Q5VT33 79 aa13.37□□□□□ -0.27
HOMER3-206ENST00000594439 PET117Q6UWS5 81 aa13.37□□□□□ -0.27
HOMER3-206ENST00000594439 MYMXA0A1B0GTQ4 84 aa13.36□□□□□ -0.27
HOMER3-206ENST00000594439 SMIM13P0DJ93 91 aa13.36□□□□□ -0.27
HOMER3-206ENST00000594439 NKAPP1Q8N9T2 125 aa13.36□□□□□ -0.27
HOMER3-206ENST00000594439 GAGE10A6NGK3 116 aa13.35□□□□□ -0.27
HOMER3-206ENST00000594439 J3QQQ9 107 aa13.35□□□□□ -0.27
HOMER3-206ENST00000594439 C3orf79P0CE67 100 aa13.35□□□□□ -0.27
HOMER3-206ENST00000594439 MEIG1Q5JSS6 88 aa13.35□□□□□ -0.27
HOMER3-206ENST00000594439 REG3GQ6UW15 175 aa13.35□□□□□ -0.27
HOMER3-206ENST00000594439 Q8NDZ9 215 aa13.35□□□□□ -0.27
HOMER3-206ENST00000594439 LINC01600Q96MT4 127 aa13.34□□□□□ -0.27
HOMER3-206ENST00000594439 RPL37AP8A6NKH3 93 aa13.33□□□□□ -0.28
HOMER3-206ENST00000594439 RPL24P83731 157 aaKnown RBP13.32□□□□□ -0.28
HOMER3-206ENST00000594439 LINC00587B1AMM8 73 aa13.31□□□□□ -0.28
HOMER3-206ENST00000594439 E9PLD3 99 aa13.31□□□□□ -0.28
HOMER3-206ENST00000594439 LGALS3P17931 250 aaKnown RBP13.31□□□□□ -0.28
HOMER3-206ENST00000594439 NMUP48645 174 aa13.31□□□□□ -0.28
HOMER3-206ENST00000594439 MIR7-3HGQ8N6C7 128 aa13.31□□□□□ -0.28
HOMER3-206ENST00000594439 DIRC1Q969H9 104 aa13.31□□□□□ -0.28
HOMER3-206ENST00000594439 KRTDAPP60985 99 aa13.3□□□□□ -0.28
HOMER3-206ENST00000594439 TNXBP22105 4242 aa13.3□□□□□ -0.28
HOMER3-206ENST00000594439 H0Y9J4 135 aa13.29□□□□□ -0.28
HOMER3-206ENST00000594439 ZNF861PO60384 105 aa13.27□□□□□ -0.29
HOMER3-206ENST00000594439 BCE1O60756 84 aa13.27□□□□□ -0.29
HOMER3-206ENST00000594439 IGLV1-50A0A075B6I6 118 aa13.26□□□□□ -0.29
HOMER3-206ENST00000594439 IGKV2-28A0A075B6P5 120 aa13.26□□□□□ -0.29
HOMER3-206ENST00000594439 IGKV2D-28P01615 120 aa13.26□□□□□ -0.29
HOMER3-206ENST00000594439 KRTAP10-8P60410 259 aa13.24□□□□□ -0.29
HOMER3-206ENST00000594439 BOD1L2Q8IYS8 172 aa13.24□□□□□ -0.29
HOMER3-206ENST00000594439 HIST3H2BBQ8N257 126 aa13.23□□□□□ -0.29
HOMER3-206ENST00000594439 DAND5Q8N907 189 aa13.23□□□□□ -0.29
HOMER3-206ENST00000594439 IGKV2D-26A0A0A0MRZ7 120 aa13.21□□□□□ -0.29
HOMER3-206ENST00000594439 LOC107984156A0A0G2JMH3 177 aa13.21□□□□□ -0.29
HOMER3-206ENST00000594439 A0A0J9YXY3 114 aa13.21□□□□□ -0.29
HOMER3-206ENST00000594439 C20orf202A1L168 122 aa13.21□□□□□ -0.29
HOMER3-206ENST00000594439 M0R378 163 aa13.21□□□□□ -0.29
HOMER3-206ENST00000594439 ARL17AQ8IVW1 177 aa13.21□□□□□ -0.29
HOMER3-206ENST00000594439 RPL28P46779 137 aaKnown RBP13.2□□□□□ -0.3
HOMER3-206ENST00000594439 TMEM238C9JI98 176 aa13.19□□□□□ -0.3
HOMER3-206ENST00000594439 KRTAP1-4P0C5Y4 121 aa13.19□□□□□ -0.3
HOMER3-206ENST00000594439 KRTAP13-1Q8IUC0 172 aa13.19□□□□□ -0.3
HOMER3-206ENST00000594439 HIST1H2BLQ99880 126 aa13.19□□□□□ -0.3
HOMER3-206ENST00000594439 TMEM126AQ9H061 195 aa13.18□□□□□ -0.3
HOMER3-206ENST00000594439 NCR3O14931 201 aa13.17□□□□□ -0.3
HOMER3-206ENST00000594439 ADAMTSL4-AS1Q5T5F5 129 aa13.17□□□□□ -0.3
HOMER3-206ENST00000594439 S100A6P06703 90 aa13.16□□□□□ -0.3
HOMER3-206ENST00000594439 S100A2P29034 98 aa13.16□□□□□ -0.3
HOMER3-206ENST00000594439 TTTY13Q9BZ97 58 aa13.16□□□□□ -0.3
HOMER3-206ENST00000594439 UBE2AP49459 152 aa13.15□□□□□ -0.3
HOMER3-206ENST00000594439 ATOH7Q8N100 152 aa13.15□□□□□ -0.3
HOMER3-206ENST00000594439 ZNF815PA8K554 130 aa13.14□□□□□ -0.31
HOMER3-206ENST00000594439 ANKRD39Q53RE8 183 aa13.14□□□□□ -0.31
HOMER3-206ENST00000594439 SOSTDC1Q6X4U4 206 aa13.14□□□□□ -0.31
HOMER3-206ENST00000594439 LITAFQ99732 161 aa13.14□□□□□ -0.31
HOMER3-206ENST00000594439 AKR1D1P51857 326 aa13.13□□□□□ -0.31
HOMER3-206ENST00000594439 PRR26Q8N8Z3 221 aa13.13□□□□□ -0.31
HOMER3-206ENST00000594439 EIF4EBP3O60516 100 aaPredicted RBP13.12□□□□□ -0.31
HOMER3-206ENST00000594439 TIMM17BO60830 172 aa13.12□□□□□ -0.31
HOMER3-206ENST00000594439 FAM19A1Q7Z5A9 133 aa13.12□□□□□ -0.31
HOMER3-206ENST00000594439 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
HOMER3-206ENST00000594439 SNRPEP62304 92 aaKnown RBP13.11□□□□□ -0.31
HOMER3-206ENST00000594439 PRLHP81277 87 aa13.11□□□□□ -0.31
HOMER3-206ENST00000594439 TRBV10-3A0A0K0K1G6 114 aa13.1□□□□□ -0.31
HOMER3-206ENST00000594439 NPC2P61916 151 aa13.1□□□□□ -0.31
HOMER3-206ENST00000594439 TRBV10-2A0A0K0K1G8 114 aa13.09□□□□□ -0.31
HOMER3-206ENST00000594439 PRYO14603 147 aa13.09□□□□□ -0.31
HOMER3-206ENST00000594439 NDUFC2O95298 119 aa13.09□□□□□ -0.31
HOMER3-206ENST00000594439 KCNQ1DNQ9H478 68 aa13.09□□□□□ -0.31
HOMER3-206ENST00000594439 SPANXB1Q9NS25 103 aaPredicted RBP13.08□□□□□ -0.32
HOMER3-206ENST00000594439 C5orf52A6NGY3 159 aa13.07□□□□□ -0.32
HOMER3-206ENST00000594439 SPRR1AP35321 89 aa13.07□□□□□ -0.32
HOMER3-206ENST00000594439 HMCN2Q8NDA2 5059 aa13.06□□□□□ -0.32
HOMER3-206ENST00000594439 LINC00308Q8TCZ7 52 aa13.06□□□□□ -0.32
HOMER3-206ENST00000594439 DDTP30046 118 aa13.04□□□□□ -0.32
HOMER3-206ENST00000594439 LINC00337Q8N6G1 96 aa13.04□□□□□ -0.32
HOMER3-206ENST00000594439 KRTAP4-16G5E9R7 235 aaPredicted RBP13.03□□□□□ -0.32
HOMER3-206ENST00000594439 PCP2Q8IVA1 136 aa13.03□□□□□ -0.32
HOMER3-206ENST00000594439 IGLV6-57P01721 117 aa13.02□□□□□ -0.33
HOMER3-206ENST00000594439 RPL13AP40429 203 aaKnown RBP13.02□□□□□ -0.33
HOMER3-206ENST00000594439 SCGB1D4Q6XE38 83 aa13.01□□□□□ -0.33
HOMER3-206ENST00000594439 A0A087X002 238 aa13□□□□□ -0.33
HOMER3-206ENST00000594439 HIGD2AQ9BW72 106 aa13□□□□□ -0.33
HOMER3-206ENST00000594439 SPANXCQ9NY87 97 aa13□□□□□ -0.33
HOMER3-206ENST00000594439 S100A12P80511 92 aa12.99□□□□□ -0.33
HOMER3-206ENST00000594439 S100A7L2Q5SY68 101 aa12.99□□□□□ -0.33
HOMER3-206ENST00000594439 SPANXDQ9BXN6 97 aa12.99□□□□□ -0.33
HOMER3-206ENST00000594439 ANAPC11Q9NYG5 84 aa12.99□□□□□ -0.33
HOMER3-206ENST00000594439 ETDCA0A1B0GVM5 59 aa12.98□□□□□ -0.33
HOMER3-206ENST00000594439 CRYGAP11844 174 aa12.96□□□□□ -0.33
HOMER3-206ENST00000594439 B5MCH6 92 aa12.95□□□□□ -0.34
HOMER3-206ENST00000594439 HSBP1L1C9JCN9 74 aa12.95□□□□□ -0.34
HOMER3-206ENST00000594439 SCGB1D1O95968 90 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms