RNA–Protein interactions for RNA: ENST00000593922.5

IRF3-207, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-207ENST00000593922 Q6ZRU5 148 aa14.36□□□□□ -0.11
IRF3-207ENST00000593922 CARD19Q96LW7 228 aa14.36□□□□□ -0.11
IRF3-207ENST00000593922 A4D1N5 150 aa14.35□□□□□ -0.11
IRF3-207ENST00000593922 NPC2P61916 151 aa14.35□□□□□ -0.11
IRF3-207ENST00000593922 C9orf116Q5BN46 136 aaPredicted RBP14.33□□□□□ -0.12
IRF3-207ENST00000593922 A0A1B0GWB2 263 aa14.31□□□□□ -0.12
IRF3-207ENST00000593922 CNBPP62633 177 aaKnown RBP14.31□□□□□ -0.12
IRF3-207ENST00000593922 RAB37Q96AX2 223 aa14.31□□□□□ -0.12
IRF3-207ENST00000593922 SLPIP03973 132 aa14.31□□□□□ -0.12
IRF3-207ENST00000593922 A0A0B4J2C4 111 aa14.3□□□□□ -0.12
IRF3-207ENST00000593922 LOC107984156A0A0G2JMH3 177 aa14.3□□□□□ -0.12
IRF3-207ENST00000593922 NDUFC2-KCTD14E9PQ53 114 aa14.3□□□□□ -0.12
IRF3-207ENST00000593922 ARL17AQ8IVW1 177 aa14.3□□□□□ -0.12
IRF3-207ENST00000593922 SND1-IT1Q9HBX3 110 aa14.3□□□□□ -0.12
IRF3-207ENST00000593922 CFC1BP0CG36 223 aa14.28□□□□□ -0.12
IRF3-207ENST00000593922 CFC1P0CG37 223 aa14.28□□□□□ -0.12
IRF3-207ENST00000593922 SOSTDC1Q6X4U4 206 aa14.28□□□□□ -0.12
IRF3-207ENST00000593922 KRTAP10-1P60331 282 aa14.27□□□□□ -0.12
IRF3-207ENST00000593922 LINC01620Q4KN68 170 aa14.27□□□□□ -0.12
IRF3-207ENST00000593922 PRO1854Q9UHT4 67 aa14.27□□□□□ -0.12
IRF3-207ENST00000593922 PKIGQ9Y2B9 76 aa14.27□□□□□ -0.12
IRF3-207ENST00000593922 TLX1NBP0CAT3 122 aa14.26□□□□□ -0.13
IRF3-207ENST00000593922 KIAA1109Q2LD37 5005 aa14.26□□□□□ -0.13
IRF3-207ENST00000593922 APOBP04114 4563 aaKnown RBP14.26□□□□□ -0.13
IRF3-207ENST00000593922 K7ERJ3 54 aa14.25□□□□□ -0.13
IRF3-207ENST00000593922 C9orf163Q8N9P6 203 aa14.25□□□□□ -0.13
IRF3-207ENST00000593922 TAX1BP3O14907 124 aa14.24□□□□□ -0.13
IRF3-207ENST00000593922 EIF4EBP3O60516 100 aaPredicted RBP14.24□□□□□ -0.13
IRF3-207ENST00000593922 NDUFC2O95298 119 aa14.24□□□□□ -0.13
IRF3-207ENST00000593922 TRAV13-2A0A0B4J235 113 aa14.22□□□□□ -0.13
IRF3-207ENST00000593922 LOC107984640A0A0U1RRK4 108 aa14.22□□□□□ -0.13
IRF3-207ENST00000593922 DNAH8Q96JB1 4490 aa14.22□□□□□ -0.13
IRF3-207ENST00000593922 C9orf118A6NHY6 69 aa14.21□□□□□ -0.13
IRF3-207ENST00000593922 RPL18AQ02543 176 aaKnown RBP14.19□□□□□ -0.14
IRF3-207ENST00000593922 GAGE2EQ4V326 116 aa14.19□□□□□ -0.14
IRF3-207ENST00000593922 GAGE2DQ9UEU5 116 aa14.19□□□□□ -0.14
IRF3-207ENST00000593922 Q6ZRP5 223 aa14.18□□□□□ -0.14
IRF3-207ENST00000593922 Q6ZSA8 131 aa14.18□□□□□ -0.14
IRF3-207ENST00000593922 RYR1P21817 5038 aa14.18□□□□□ -0.14
IRF3-207ENST00000593922 XAGE1AQ9HD64 81 aa14.18□□□□□ -0.14
IRF3-207ENST00000593922 Q1RN00 199 aa14.16□□□□□ -0.14
IRF3-207ENST00000593922 SDIM1Q6ZPB5 146 aa14.16□□□□□ -0.14
IRF3-207ENST00000593922 HSPG2P98160 4391 aa14.16□□□□□ -0.14
IRF3-207ENST00000593922 FAM30AQ9NZY2 134 aa14.15□□□□□ -0.14
IRF3-207ENST00000593922 H3BUT2 72 aa14.14□□□□□ -0.15
IRF3-207ENST00000593922 CDK2AP2O75956 126 aa14.14□□□□□ -0.15
IRF3-207ENST00000593922 RPL13AP40429 203 aaKnown RBP14.14□□□□□ -0.15
IRF3-207ENST00000593922 LYRM7Q5U5X0 104 aa14.13□□□□□ -0.15
IRF3-207ENST00000593922 IGKV2-28A0A075B6P5 120 aa14.12□□□□□ -0.15
IRF3-207ENST00000593922 TRBV10-2A0A0K0K1G8 114 aa14.12□□□□□ -0.15
IRF3-207ENST00000593922 H7C2G1 150 aa14.12□□□□□ -0.15
IRF3-207ENST00000593922 TSPAN13O95857 204 aa14.12□□□□□ -0.15
IRF3-207ENST00000593922 IGKV2D-28P01615 120 aa14.12□□□□□ -0.15
IRF3-207ENST00000593922 GAGE2BQ13066 116 aa14.12□□□□□ -0.15
IRF3-207ENST00000593922 PSMB2P49721 201 aa14.12□□□□□ -0.15
IRF3-207ENST00000593922 OR13C6PQ8NH95 151 aa14.12□□□□□ -0.15
IRF3-207ENST00000593922 FABP2P12104 132 aa14.11□□□□□ -0.15
IRF3-207ENST00000593922 TMEM126AQ9H061 195 aa14.11□□□□□ -0.15
IRF3-207ENST00000593922 PLA2G2DQ9UNK4 145 aa14.1□□□□□ -0.15
IRF3-207ENST00000593922 A0A1W2PPM0 123 aa14.09□□□□□ -0.15
IRF3-207ENST00000593922 PANO1I0J062 215 aa14.09□□□□□ -0.15
IRF3-207ENST00000593922 COX6CP09669 75 aa14.09□□□□□ -0.15
IRF3-207ENST00000593922 XGP55808 180 aa14.09□□□□□ -0.15
IRF3-207ENST00000593922 S100A7L2Q5SY68 101 aa14.09□□□□□ -0.15
IRF3-207ENST00000593922 LINC00337Q8N6G1 96 aa14.09□□□□□ -0.15
IRF3-207ENST00000593922 CBY1Q9Y3M2 126 aa14.09□□□□□ -0.15
IRF3-207ENST00000593922 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.09□□□□□ -0.15
IRF3-207ENST00000593922 A0A1B0GV90 55 aa14.08□□□□□ -0.16
IRF3-207ENST00000593922 VAMP3Q15836 100 aa14.08□□□□□ -0.16
IRF3-207ENST00000593922 C9orf129Q5T035 196 aaKnown RBP14.08□□□□□ -0.16
IRF3-207ENST00000593922 LINC00474Q9P2X8 69 aa14.08□□□□□ -0.16
IRF3-207ENST00000593922 HAMPP81172 84 aa14.07□□□□□ -0.16
IRF3-207ENST00000593922 NCR3O14931 201 aa14.06□□□□□ -0.16
IRF3-207ENST00000593922 CHTF8P0CG12 524 aa14.06□□□□□ -0.16
IRF3-207ENST00000593922 SCGB1C2P0DMR2 95 aa14.06□□□□□ -0.16
IRF3-207ENST00000593922 NKAPP1Q8N9T2 125 aa14.06□□□□□ -0.16
IRF3-207ENST00000593922 NAA38Q9BRA0 125 aaKnown RBP14.06□□□□□ -0.16
IRF3-207ENST00000593922 A0A096LNI7 61 aa14.06□□□□□ -0.16
IRF3-207ENST00000593922 M0R378 163 aa14.06□□□□□ -0.16
IRF3-207ENST00000593922 VPREB1P12018 145 aa14.06□□□□□ -0.16
IRF3-207ENST00000593922 PRR3P79522 188 aaKnown RBP14.06□□□□□ -0.16
IRF3-207ENST00000593922 HERC2O95714 4834 aa14.05□□□□□ -0.16
IRF3-207ENST00000593922 SPACA4Q8TDM5 124 aa14.05□□□□□ -0.16
IRF3-207ENST00000593922 SCXQ7RTU7 201 aa14.04□□□□□ -0.16
IRF3-207ENST00000593922 GTF2H5Q6ZYL4 71 aa14.03□□□□□ -0.16
IRF3-207ENST00000593922 IGKV2-24A0A0C4DH68 120 aa14.02□□□□□ -0.16
IRF3-207ENST00000593922 RPL28P46779 137 aaKnown RBP14.02□□□□□ -0.16
IRF3-207ENST00000593922 Q8NDZ9 215 aa14.02□□□□□ -0.16
IRF3-207ENST00000593922 IGLV5-37A0A075B6J1 123 aa14□□□□□ -0.17
IRF3-207ENST00000593922 TRBV20-1A0A075B6N2 111 aa14□□□□□ -0.17
IRF3-207ENST00000593922 CIRBP-AS1Q8TBR5 109 aa14□□□□□ -0.17
IRF3-207ENST00000593922 SPCS1Q9Y6A9 102 aa14□□□□□ -0.17
IRF3-207ENST00000593922 GAGE10A6NGK3 116 aa13.99□□□□□ -0.17
IRF3-207ENST00000593922 IGLV6-57P01721 117 aa13.99□□□□□ -0.17
IRF3-207ENST00000593922 TRIAP1O43715 76 aa13.99□□□□□ -0.17
IRF3-207ENST00000593922 SMIM11BQ8TCY0 68 aa13.99□□□□□ -0.17
IRF3-207ENST00000593922 SERTAD4-AS1Q5TG53 156 aa13.97□□□□□ -0.17
IRF3-207ENST00000593922 A0A087WYN8 130 aa13.95□□□□□ -0.18
IRF3-207ENST00000593922 K7EP34 96 aa13.95□□□□□ -0.18
IRF3-207ENST00000593922 DPH3Q96FX2 82 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms