RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 SCGB1D1O95968 90 aa12.94□□□□□ -0.34
DNMT1-227ENST00000592342 MIR7-3HGQ8N6C7 128 aa12.94□□□□□ -0.34
DNMT1-227ENST00000592342 NKAPP1Q8N9T2 125 aa12.94□□□□□ -0.34
DNMT1-227ENST00000592342 IGKV2D-26A0A0A0MRZ7 120 aa12.93□□□□□ -0.34
DNMT1-227ENST00000592342 LBHQ53QV2 105 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-227ENST00000592342 ZNF815PA8K554 130 aa12.92□□□□□ -0.34
DNMT1-227ENST00000592342 HSBP1L1C9JCN9 74 aa12.92□□□□□ -0.34
DNMT1-227ENST00000592342 RPL24P83731 157 aaKnown RBP12.92□□□□□ -0.34
DNMT1-227ENST00000592342 ANKRD39Q53RE8 183 aa12.92□□□□□ -0.34
DNMT1-227ENST00000592342 A0A0J9YXY3 114 aa12.91□□□□□ -0.34
DNMT1-227ENST00000592342 KRTAP10-4P60372 401 aaPredicted RBP12.91□□□□□ -0.34
DNMT1-227ENST00000592342 PRR3P79522 188 aaKnown RBP12.91□□□□□ -0.34
DNMT1-227ENST00000592342 MRPL55Q7Z7F7 128 aaKnown RBP12.91□□□□□ -0.34
DNMT1-227ENST00000592342 TP73-AS1Q9UF72 201 aa12.91□□□□□ -0.34
DNMT1-227ENST00000592342 DAND5Q8N907 189 aa12.89□□□□□ -0.35
DNMT1-227ENST00000592342 TTTY13Q9BZ97 58 aa12.89□□□□□ -0.35
DNMT1-227ENST00000592342 IGLV5-37A0A075B6J1 123 aa12.88□□□□□ -0.35
DNMT1-227ENST00000592342 PSORS1C2Q9UIG4 136 aa12.88□□□□□ -0.35
DNMT1-227ENST00000592342 VPREB1P12018 145 aa12.87□□□□□ -0.35
DNMT1-227ENST00000592342 C1orf137Q5JT78 98 aa12.87□□□□□ -0.35
DNMT1-227ENST00000592342 BOD1L2Q8IYS8 172 aa12.87□□□□□ -0.35
DNMT1-227ENST00000592342 MIEN1Q9BRT3 115 aa12.87□□□□□ -0.35
DNMT1-227ENST00000592342 GAGE10A6NGK3 116 aa12.86□□□□□ -0.35
DNMT1-227ENST00000592342 SCGB1D4Q6XE38 83 aa12.85□□□□□ -0.35
DNMT1-227ENST00000592342 LINC00167Q96N53 147 aa12.85□□□□□ -0.35
DNMT1-227ENST00000592342 KRTAP11-1Q8IUC1 163 aa12.84□□□□□ -0.35
DNMT1-227ENST00000592342 RPL37AP8A6NKH3 93 aa12.83□□□□□ -0.36
DNMT1-227ENST00000592342 TIMM17BO60830 172 aa12.82□□□□□ -0.36
DNMT1-227ENST00000592342 PCP2Q8IVA1 136 aa12.82□□□□□ -0.36
DNMT1-227ENST00000592342 ABCA13Q86UQ4 5058 aa12.81□□□□□ -0.36
DNMT1-227ENST00000592342 HNRNPA3P51991 378 aaKnown RBP12.81□□□□□ -0.36
DNMT1-227ENST00000592342 NPC2P61916 151 aa12.81□□□□□ -0.36
DNMT1-227ENST00000592342 ADAMTSL4-AS1Q5T5F5 129 aa12.81□□□□□ -0.36
DNMT1-227ENST00000592342 Q8NDZ9 215 aa12.81□□□□□ -0.36
DNMT1-227ENST00000592342 IGKV2-28A0A075B6P5 120 aa12.79□□□□□ -0.36
DNMT1-227ENST00000592342 LOC107984156A0A0G2JMH3 177 aa12.79□□□□□ -0.36
DNMT1-227ENST00000592342 M0R378 163 aa12.79□□□□□ -0.36
DNMT1-227ENST00000592342 IGKV2D-28P01615 120 aa12.79□□□□□ -0.36
DNMT1-227ENST00000592342 ARL17AQ8IVW1 177 aa12.79□□□□□ -0.36
DNMT1-227ENST00000592342 TMEM238C9JI98 176 aa12.78□□□□□ -0.36
DNMT1-227ENST00000592342 NCR3O14931 201 aa12.78□□□□□ -0.36
DNMT1-227ENST00000592342 LITAFQ99732 161 aa12.78□□□□□ -0.36
DNMT1-227ENST00000592342 IGLV7-43P04211 117 aa12.77□□□□□ -0.37
DNMT1-227ENST00000592342 JOSD1Q15040 202 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-227ENST00000592342 SPINK6Q6UWN8 80 aa12.76□□□□□ -0.37
DNMT1-227ENST00000592342 SRRM2Q9UQ35 2752 aaKnown RBP12.75□□□□□ -0.37
DNMT1-227ENST00000592342 IGLV1-50A0A075B6I6 118 aa12.75□□□□□ -0.37
DNMT1-227ENST00000592342 LINC00308Q8TCZ7 52 aa12.75□□□□□ -0.37
DNMT1-227ENST00000592342 SOSTDC1Q6X4U4 206 aa12.74□□□□□ -0.37
DNMT1-227ENST00000592342 PCLOQ9Y6V0 5065 aa12.73□□□□□ -0.37
DNMT1-227ENST00000592342 VPS13BQ7Z7G8 4022 aa12.73□□□□□ -0.37
DNMT1-227ENST00000592342 NDUFC2O95298 119 aa12.73□□□□□ -0.37
DNMT1-227ENST00000592342 VAMP8Q9BV40 100 aa12.73□□□□□ -0.37
DNMT1-227ENST00000592342 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.37
DNMT1-227ENST00000592342 SPANXDQ9BXN6 97 aa12.72□□□□□ -0.37
DNMT1-227ENST00000592342 SPANXB1Q9NS25 103 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-227ENST00000592342 SPANXCQ9NY87 97 aa12.72□□□□□ -0.37
DNMT1-227ENST00000592342 BCE1O60756 84 aa12.71□□□□□ -0.37
DNMT1-227ENST00000592342 REG3GQ6UW15 175 aa12.71□□□□□ -0.37
DNMT1-227ENST00000592342 COPS9Q8WXC6 57 aa12.71□□□□□ -0.37
DNMT1-227ENST00000592342 PAM16Q9Y3D7 125 aa12.71□□□□□ -0.37
DNMT1-227ENST00000592342 TRBV10-2A0A0K0K1G8 114 aa12.7□□□□□ -0.38
DNMT1-227ENST00000592342 EIF4EBP3O60516 100 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-227ENST00000592342 S100A12P80511 92 aa12.7□□□□□ -0.38
DNMT1-227ENST00000592342 SPATA45Q537H7 98 aa12.7□□□□□ -0.38
DNMT1-227ENST00000592342 Q6ZVH6 145 aa12.7□□□□□ -0.38
DNMT1-227ENST00000592342 S100A7L2Q5SY68 101 aa12.69□□□□□ -0.38
DNMT1-227ENST00000592342 TMEM126AQ9H061 195 aa12.69□□□□□ -0.38
DNMT1-227ENST00000592342 TRBV10-3A0A0K0K1G6 114 aa12.68□□□□□ -0.38
DNMT1-227ENST00000592342 UBE2AP49459 152 aa12.68□□□□□ -0.38
DNMT1-227ENST00000592342 DIRC1Q969H9 104 aa12.68□□□□□ -0.38
DNMT1-227ENST00000592342 ZNF861PO60384 105 aa12.67□□□□□ -0.38
DNMT1-227ENST00000592342 COX8AP10176 69 aa12.67□□□□□ -0.38
DNMT1-227ENST00000592342 IFITM1P13164 125 aa12.67□□□□□ -0.38
DNMT1-227ENST00000592342 DDTP30046 118 aa12.67□□□□□ -0.38
DNMT1-227ENST00000592342 RPL28P46779 137 aaKnown RBP12.67□□□□□ -0.38
DNMT1-227ENST00000592342 PYY3Q5JQD4 70 aa12.67□□□□□ -0.38
DNMT1-227ENST00000592342 FLG2Q5D862 2391 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-227ENST00000592342 FAM19A1Q7Z5A9 133 aa12.66□□□□□ -0.38
DNMT1-227ENST00000592342 PRYO14603 147 aa12.65□□□□□ -0.38
DNMT1-227ENST00000592342 OXTP01178 125 aa12.64□□□□□ -0.39
DNMT1-227ENST00000592342 MUSTN1Q8IVN3 82 aa12.64□□□□□ -0.39
DNMT1-227ENST00000592342 C14orf144Q96I85 54 aa12.64□□□□□ -0.39
DNMT1-227ENST00000592342 H0Y9J4 135 aa12.63□□□□□ -0.39
DNMT1-227ENST00000592342 J3QL48 77 aa12.63□□□□□ -0.39
DNMT1-227ENST00000592342 OR13C6PQ8NH95 151 aa12.63□□□□□ -0.39
DNMT1-227ENST00000592342 KCNQ1DNQ9H478 68 aa12.63□□□□□ -0.39
DNMT1-227ENST00000592342 KRTAP29-1A8MX34 341 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-227ENST00000592342 DLEU1O43261 78 aa12.62□□□□□ -0.39
DNMT1-227ENST00000592342 LINC00518Q8N0U6 118 aa12.62□□□□□ -0.39
DNMT1-227ENST00000592342 PRLHP81277 87 aa12.61□□□□□ -0.39
DNMT1-227ENST00000592342 PPDPFQ9H3Y8 114 aa12.61□□□□□ -0.39
DNMT1-227ENST00000592342 SLC25A34Q6PIV7 304 aa12.6□□□□□ -0.39
DNMT1-227ENST00000592342 CBY1Q9Y3M2 126 aa12.6□□□□□ -0.39
DNMT1-227ENST00000592342 ETDCA0A1B0GVM5 59 aa12.59□□□□□ -0.39
DNMT1-227ENST00000592342 IGLV6-57P01721 117 aa12.59□□□□□ -0.39
DNMT1-227ENST00000592342 TRAV23DV6A0A075B6W5 121 aa12.57□□□□□ -0.4
DNMT1-227ENST00000592342 HIST1H4GQ99525 98 aa12.57□□□□□ -0.4
DNMT1-227ENST00000592342 SPRR1AP35321 89 aa12.56□□□□□ -0.4
DNMT1-227ENST00000592342 KRTAP13-1Q8IUC0 172 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms