RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SOSTDC1Q6X4U4 206 aa9.35□□□□□ -0.91
SMARCA4-216ENST00000591545 PMAIP1Q13794 54 aa9.35□□□□□ -0.91
SMARCA4-216ENST00000591545 TRBV7-6A0A0J9YX20 115 aa9.34□□□□□ -0.91
SMARCA4-216ENST00000591545 LINC00846Q9NV44 126 aa9.34□□□□□ -0.91
SMARCA4-216ENST00000591545 hDV103S1A0JD37 113 aa9.34□□□□□ -0.91
SMARCA4-216ENST00000591545 LINC01556Q5JQF7 62 aa9.34□□□□□ -0.92
SMARCA4-216ENST00000591545 Q6ZSN1 163 aa9.34□□□□□ -0.92
SMARCA4-216ENST00000591545 Q9BRP9 147 aa9.34□□□□□ -0.92
SMARCA4-216ENST00000591545 PRUNE2Q8WUY3 3088 aa9.33□□□□□ -0.92
SMARCA4-216ENST00000591545 A0A0C4DFX4 3053 aa9.33□□□□□ -0.92
SMARCA4-216ENST00000591545 SBSPONQ8IVN8 264 aa9.32□□□□□ -0.92
SMARCA4-216ENST00000591545 H0Y9P7 68 aa9.32□□□□□ -0.92
SMARCA4-216ENST00000591545 LINC00337Q8N6G1 96 aa9.32□□□□□ -0.92
SMARCA4-216ENST00000591545 HCG22E2RYF7 251 aa9.31□□□□□ -0.92
SMARCA4-216ENST00000591545 PTPRBP23467 1997 aa9.31□□□□□ -0.92
SMARCA4-216ENST00000591545 WWC2-AS2Q96NR7 200 aa9.31□□□□□ -0.92
SMARCA4-216ENST00000591545 A0A087WSZ3 146 aa9.3□□□□□ -0.92
SMARCA4-216ENST00000591545 IGHV6-1A0A0B4J1U7 121 aa9.3□□□□□ -0.92
SMARCA4-216ENST00000591545 A0A1B0GW54 56 aa9.29□□□□□ -0.92
SMARCA4-216ENST00000591545 CIRBP-AS1Q8TBR5 109 aa9.29□□□□□ -0.92
SMARCA4-216ENST00000591545 RPS28P62857 69 aaKnown RBP9.28□□□□□ -0.92
SMARCA4-216ENST00000591545 H3BNG1 76 aa9.27□□□□□ -0.92
SMARCA4-216ENST00000591545 C11orf72Q8NBR9 251 aa9.27□□□□□ -0.92
SMARCA4-216ENST00000591545 AGRNO00468 2067 aa9.26□□□□□ -0.93
SMARCA4-216ENST00000591545 CRYGAP11844 174 aa9.26□□□□□ -0.93
SMARCA4-216ENST00000591545 FAM19A4Q96LR4 140 aa9.26□□□□□ -0.93
SMARCA4-216ENST00000591545 PRO0628Q9UI54 55 aa9.26□□□□□ -0.93
SMARCA4-216ENST00000591545 IGLV5-45A0A087WSX0 123 aa9.26□□□□□ -0.93
SMARCA4-216ENST00000591545 PRO0461Q9UI25 63 aa9.25□□□□□ -0.93
SMARCA4-216ENST00000591545 IGHV3OR16-9A0A0B4J2B5 98 aa9.25□□□□□ -0.93
SMARCA4-216ENST00000591545 LINC00315P59091 139 aa9.25□□□□□ -0.93
SMARCA4-216ENST00000591545 Q6ZRU5 148 aa9.25□□□□□ -0.93
SMARCA4-216ENST00000591545 PCOTHQ58A44 107 aa9.24□□□□□ -0.93
SMARCA4-216ENST00000591545 LIMD2Q9BT23 127 aa9.24□□□□□ -0.93
SMARCA4-216ENST00000591545 SZT2Q5T011 3432 aa9.23□□□□□ -0.93
SMARCA4-216ENST00000591545 X6R8D5 127 aa9.23□□□□□ -0.93
SMARCA4-216ENST00000591545 PSPHP1O15172 72 aa9.23□□□□□ -0.93
SMARCA4-216ENST00000591545 HECTD1Q9ULT8 2610 aa9.22□□□□□ -0.93
SMARCA4-216ENST00000591545 TRIOO75962 3097 aa9.21□□□□□ -0.93
SMARCA4-216ENST00000591545 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
SMARCA4-216ENST00000591545 SPATA3Q8NHX4 192 aa9.2□□□□□ -0.94
SMARCA4-216ENST00000591545 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
SMARCA4-216ENST00000591545 TP53AIP1Q9HCN2 124 aa9.2□□□□□ -0.94
SMARCA4-216ENST00000591545 C1orf64Q8NEQ6 169 aa9.2□□□□□ -0.94
SMARCA4-216ENST00000591545 C22orf24Q9Y442 160 aa9.19□□□□□ -0.94
SMARCA4-216ENST00000591545 NBDYA0A0U1RRE5 68 aa9.19□□□□□ -0.94
SMARCA4-216ENST00000591545 SMCR5Q8TEV8 140 aa9.19□□□□□ -0.94
SMARCA4-216ENST00000591545 A8MTW9 85 aa9.18□□□□□ -0.94
SMARCA4-216ENST00000591545 DNAH14Q0VDD8 3507 aa9.18□□□□□ -0.94
SMARCA4-216ENST00000591545 H3BPC8 53 aa9.18□□□□□ -0.94
SMARCA4-216ENST00000591545 XIRP2A4UGR9 3374 aa9.18□□□□□ -0.94
SMARCA4-216ENST00000591545 KIAA0087Q14695 138 aa9.17□□□□□ -0.94
SMARCA4-216ENST00000591545 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
SMARCA4-216ENST00000591545 LOC110117498A0A087WWA1 95 aa9.16□□□□□ -0.94
SMARCA4-216ENST00000591545 SMIM29Q86T20 159 aa9.16□□□□□ -0.94
SMARCA4-216ENST00000591545 Q8NAQ8 132 aa9.16□□□□□ -0.94
SMARCA4-216ENST00000591545 PRLHP81277 87 aa9.15□□□□□ -0.94
SMARCA4-216ENST00000591545 ELOF1P60002 83 aaKnown RBP9.14□□□□□ -0.95
SMARCA4-216ENST00000591545 DEFB116Q30KQ4 102 aa9.14□□□□□ -0.95
SMARCA4-216ENST00000591545 Q6ZQT0 140 aa9.12□□□□□ -0.95
SMARCA4-216ENST00000591545 COL27A1Q8IZC6 1860 aaPredicted RBP9.12□□□□□ -0.95
SMARCA4-216ENST00000591545 A0A096LNT2 108 aa9.12□□□□□ -0.95
SMARCA4-216ENST00000591545 C6orf48Q9UBA6 75 aa9.12□□□□□ -0.95
SMARCA4-216ENST00000591545 FAM218AQ96MZ4 157 aa9.11□□□□□ -0.95
SMARCA4-216ENST00000591545 LINC00588Q9Y4M8 146 aa9.11□□□□□ -0.95
SMARCA4-216ENST00000591545 RTL8CO15255 209 aa9.11□□□□□ -0.95
SMARCA4-216ENST00000591545 KLK9Q2XQG4 91 aa9.1□□□□□ -0.95
SMARCA4-216ENST00000591545 LINC00167Q96N53 147 aa9.1□□□□□ -0.95
SMARCA4-216ENST00000591545 K7EIL1 84 aa9.1□□□□□ -0.95
SMARCA4-216ENST00000591545 Q8NBF4 154 aa9.1□□□□□ -0.95
SMARCA4-216ENST00000591545 SPINK1P00995 79 aa9.09□□□□□ -0.95
SMARCA4-216ENST00000591545 ACYP2P14621 99 aa9.09□□□□□ -0.95
SMARCA4-216ENST00000591545 RETNLBQ9BQ08 111 aa9.09□□□□□ -0.95
SMARCA4-216ENST00000591545 A0A1B0GU69 56 aa9.06□□□□□ -0.96
SMARCA4-216ENST00000591545 LAMA1P25391 3075 aa9.06□□□□□ -0.96
SMARCA4-216ENST00000591545 Q6ZRX8 168 aa9.06□□□□□ -0.96
SMARCA4-216ENST00000591545 Q6ZRP5 223 aa9.05□□□□□ -0.96
SMARCA4-216ENST00000591545 MGAM2Q2M2H8 2515 aa9.05□□□□□ -0.96
SMARCA4-216ENST00000591545 GVQW2A0A096LPI5 108 aaPredicted RBP9.04□□□□□ -0.96
SMARCA4-216ENST00000591545 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
SMARCA4-216ENST00000591545 VCANP13611 3396 aa9.04□□□□□ -0.96
SMARCA4-216ENST00000591545 C4orf26Q17RF5 130 aa9.03□□□□□ -0.96
SMARCA4-216ENST00000591545 KRTAP10-11P60412 298 aa9.03□□□□□ -0.96
SMARCA4-216ENST00000591545 IGKV2D-30A0A075B6S6 120 aa9.03□□□□□ -0.96
SMARCA4-216ENST00000591545 IGKV2-30P06310 120 aa9.03□□□□□ -0.96
SMARCA4-216ENST00000591545 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.96
SMARCA4-216ENST00000591545 MUC4Q99102 2169 aa9.02□□□□□ -0.97
SMARCA4-216ENST00000591545 DNAH10OSP0CZ25 163 aa9.02□□□□□ -0.97
SMARCA4-216ENST00000591545 LINC00476Q8WZB0 136 aa9.02□□□□□ -0.97
SMARCA4-216ENST00000591545 C19orf73Q9NVV2 129 aa9.02□□□□□ -0.97
SMARCA4-216ENST00000591545 ERC2-IT1O76042 136 aa9.02□□□□□ -0.97
SMARCA4-216ENST00000591545 CFAP54Q96N23 3096 aa9.02□□□□□ -0.97
SMARCA4-216ENST00000591545 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
SMARCA4-216ENST00000591545 LITAFQ99732 161 aa9.01□□□□□ -0.97
SMARCA4-216ENST00000591545 MOBPQ13875 183 aa9□□□□□ -0.97
SMARCA4-216ENST00000591545 SPTBN5Q9NRC6 3674 aaKnown RBP9□□□□□ -0.97
SMARCA4-216ENST00000591545 J3QL48 77 aa9□□□□□ -0.97
SMARCA4-216ENST00000591545 Q9UF83 564 aa8.99□□□□□ -0.97
SMARCA4-216ENST00000591545 TRBV7-4A0A0J9YYF1 115 aa8.99□□□□□ -0.97
SMARCA4-216ENST00000591545 SPAG11AQ6PDA7 123 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms