RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 MYMXA0A1B0GTQ4 84 aa6.01□□□□□ -1.45
BRCA1-226ENST00000591534 LEPROTO15243 131 aa6.01□□□□□ -1.45
BRCA1-226ENST00000591534 COX8AP10176 69 aa6.01□□□□□ -1.45
BRCA1-226ENST00000591534 HNRNPA3P51991 378 aaKnown RBP6.01□□□□□ -1.45
BRCA1-226ENST00000591534 LINC00242Q5T6M2 205 aa6.01□□□□□ -1.45
BRCA1-226ENST00000591534 KRTAP26-1Q6PEX3 210 aa6.01□□□□□ -1.45
BRCA1-226ENST00000591534 MIEN1Q9BRT3 115 aa6.01□□□□□ -1.45
BRCA1-226ENST00000591534 IGLV4-60A0A075B6I1 120 aa6□□□□□ -1.45
BRCA1-226ENST00000591534 A0A087WYN8 130 aa6□□□□□ -1.45
BRCA1-226ENST00000591534 TMEM223A0PJW6 202 aa6□□□□□ -1.45
BRCA1-226ENST00000591534 Q6ZVH6 145 aa6□□□□□ -1.45
BRCA1-226ENST00000591534 IGHV3OR16-9A0A0B4J2B5 98 aa5.99□□□□□ -1.45
BRCA1-226ENST00000591534 J3QQQ9 107 aa5.99□□□□□ -1.45
BRCA1-226ENST00000591534 ZNF22P17026 224 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-226ENST00000591534 SCGB1D4Q6XE38 83 aa5.99□□□□□ -1.45
BRCA1-226ENST00000591534 ATOH7Q8N100 152 aa5.99□□□□□ -1.45
BRCA1-226ENST00000591534 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
BRCA1-226ENST00000591534 CHCHD10Q8WYQ3 142 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-226ENST00000591534 OPRPNQ99935 248 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-226ENST00000591534 IGKV3OR2-268A0A0C4DH90 116 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 TMEM238C9JI98 176 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 PANO1I0J062 215 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 M0R143 59 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 XCL1P47992 114 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 CKS1BP61024 79 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 C6orf226Q5I0X4 101 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 Q8IZM0 81 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 PLAC8Q9NZF1 115 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 HIGD1BQ9P298 99 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 LINC00474Q9P2X8 69 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 CDKN2A-AS1Q9UH64 79 aa5.98□□□□□ -1.45
BRCA1-226ENST00000591534 IGLV5-39A0A0G2JS06 123 aa5.97□□□□□ -1.45
BRCA1-226ENST00000591534 TAL2Q16559 108 aa5.97□□□□□ -1.45
BRCA1-226ENST00000591534 RNASE13Q5GAN3 156 aaKnown RBP5.97□□□□□ -1.45
BRCA1-226ENST00000591534 C10orf25Q5T742 122 aa5.97□□□□□ -1.45
BRCA1-226ENST00000591534 STPG4Q8N801 248 aa5.97□□□□□ -1.45
BRCA1-226ENST00000591534 ZNF815PA8K554 130 aa5.96□□□□□ -1.46
BRCA1-226ENST00000591534 TIMM17BO60830 172 aa5.96□□□□□ -1.46
BRCA1-226ENST00000591534 COX6A2Q02221 97 aa5.96□□□□□ -1.46
BRCA1-226ENST00000591534 COX17Q14061 63 aa5.96□□□□□ -1.46
BRCA1-226ENST00000591534 MAJINQ3KP22 176 aa5.96□□□□□ -1.46
BRCA1-226ENST00000591534 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
BRCA1-226ENST00000591534 FAM104AQ969W3 186 aa5.96□□□□□ -1.46
BRCA1-226ENST00000591534 NDUFA12Q9UI09 145 aa5.96□□□□□ -1.46
BRCA1-226ENST00000591534 A0A0J9YXY3 114 aa5.95□□□□□ -1.46
BRCA1-226ENST00000591534 SMIM1B2RUZ4 78 aa5.95□□□□□ -1.46
BRCA1-226ENST00000591534 NDUFA1O15239 70 aa5.95□□□□□ -1.46
BRCA1-226ENST00000591534 CHTF8P0CG12 524 aa5.95□□□□□ -1.46
BRCA1-226ENST00000591534 DDTP30046 118 aa5.95□□□□□ -1.46
BRCA1-226ENST00000591534 LBHQ53QV2 105 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-226ENST00000591534 REG3GQ6UW15 175 aa5.95□□□□□ -1.46
BRCA1-226ENST00000591534 COX7B2Q8TF08 81 aa5.95□□□□□ -1.46
BRCA1-226ENST00000591534 LINC01600Q96MT4 127 aa5.95□□□□□ -1.46
BRCA1-226ENST00000591534 PPDPFQ9H3Y8 114 aa5.95□□□□□ -1.46
BRCA1-226ENST00000591534 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
BRCA1-226ENST00000591534 IGKV2-24A0A0C4DH68 120 aa5.94□□□□□ -1.46
BRCA1-226ENST00000591534 IFITM1P13164 125 aa5.94□□□□□ -1.46
BRCA1-226ENST00000591534 C14orf144Q96I85 54 aa5.94□□□□□ -1.46
BRCA1-226ENST00000591534 C2orf48Q96LS8 159 aa5.94□□□□□ -1.46
BRCA1-226ENST00000591534 GVQW2A0A096LPI5 108 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-226ENST00000591534 SPINK8P0C7L1 97 aa5.93□□□□□ -1.46
BRCA1-226ENST00000591534 PRR3P79522 188 aaKnown RBP5.93□□□□□ -1.46
BRCA1-226ENST00000591534 SRSF9Q13242 221 aaKnown RBP eCLIP5.93□□□□□ -1.46
BRCA1-226ENST00000591534 HIGD2BQ4VC39 106 aa5.93□□□□□ -1.46
BRCA1-226ENST00000591534 SPINK6Q6UWN8 80 aa5.93□□□□□ -1.46
BRCA1-226ENST00000591534 C15orf56Q8N910 161 aa5.93□□□□□ -1.46
BRCA1-226ENST00000591534 ORAOV1Q8WV07 137 aa5.93□□□□□ -1.46
BRCA1-226ENST00000591534 TRBV30A0A0K0K1B3 111 aa5.92□□□□□ -1.46
BRCA1-226ENST00000591534 RPL24P83731 157 aaKnown RBP5.92□□□□□ -1.46
BRCA1-226ENST00000591534 HSD52Q0P140 79 aa5.92□□□□□ -1.46
BRCA1-226ENST00000591534 C5orf38Q86SI9 138 aa5.92□□□□□ -1.46
BRCA1-226ENST00000591534 SPANXB1Q9NS25 103 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-226ENST00000591534 TOMM7Q9P0U1 55 aa5.92□□□□□ -1.46
BRCA1-226ENST00000591534 CBY1Q9Y3M2 126 aa5.92□□□□□ -1.46
BRCA1-226ENST00000591534 A6NDN8 102 aa5.91□□□□□ -1.46
BRCA1-226ENST00000591534 SPAG11BQ08648 103 aa5.91□□□□□ -1.46
BRCA1-226ENST00000591534 MEIG1Q5JSS6 88 aa5.91□□□□□ -1.46
BRCA1-226ENST00000591534 Q6ZRP5 223 aa5.91□□□□□ -1.46
BRCA1-226ENST00000591534 HIST1H4GQ99525 98 aa5.91□□□□□ -1.46
BRCA1-226ENST00000591534 TP73-AS1Q9UF72 201 aa5.91□□□□□ -1.46
BRCA1-226ENST00000591534 CARD19Q96LW7 228 aa5.9□□□□□ -1.46
BRCA1-226ENST00000591534 PRO1933Q9H354 126 aa5.9□□□□□ -1.46
BRCA1-226ENST00000591534 PCP2Q8IVA1 136 aa5.89□□□□□ -1.47
BRCA1-226ENST00000591534 A0A096LNI7 61 aa5.88□□□□□ -1.47
BRCA1-226ENST00000591534 IGKV2D-26A0A0A0MRZ7 120 aa5.88□□□□□ -1.47
BRCA1-226ENST00000591534 PCP4L1A6NKN8 68 aa5.88□□□□□ -1.47
BRCA1-226ENST00000591534 SYCNQ0VAF6 134 aa5.88□□□□□ -1.47
BRCA1-226ENST00000591534 ZNF625Q96I27 306 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-226ENST00000591534 CAMK2N2Q96S95 79 aa5.88□□□□□ -1.47
BRCA1-226ENST00000591534 SPANXDQ9BXN6 97 aa5.88□□□□□ -1.47
BRCA1-226ENST00000591534 SPANXCQ9NY87 97 aa5.88□□□□□ -1.47
BRCA1-226ENST00000591534 LOC107984640A0A0U1RRK4 108 aa5.86□□□□□ -1.47
BRCA1-226ENST00000591534 LINC00158P58513 81 aa5.86□□□□□ -1.47
BRCA1-226ENST00000591534 KRTAP10-8P60410 259 aa5.86□□□□□ -1.47
BRCA1-226ENST00000591534 CTAG1AP78358 180 aa5.86□□□□□ -1.47
BRCA1-226ENST00000591534 CEND1Q8N111 149 aa5.86□□□□□ -1.47
BRCA1-226ENST00000591534 ERG28Q9UKR5 140 aa5.86□□□□□ -1.47
BRCA1-226ENST00000591534 LRP2P98164 4655 aa5.86□□□□□ -1.47
BRCA1-226ENST00000591534 RNF213Q63HN8 5207 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms