RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 FAM19A5Q7Z5A7 132 aaPredicted RBP13.42□□□□□ -0.26
R3HDM4-206ENST00000590454 MYMXA0A1B0GTQ4 84 aa13.41□□□□□ -0.26
R3HDM4-206ENST00000590454 ANKRD39Q53RE8 183 aa13.41□□□□□ -0.26
R3HDM4-206ENST00000590454 SMIM13P0DJ93 91 aa13.4□□□□□ -0.26
R3HDM4-206ENST00000590454 PHF5AQ7RTV0 110 aaKnown RBP13.4□□□□□ -0.26
R3HDM4-206ENST00000590454 TTTY13Q9BZ97 58 aa13.4□□□□□ -0.26
R3HDM4-206ENST00000590454 LINC00158P58513 81 aa13.39□□□□□ -0.27
R3HDM4-206ENST00000590454 HERV-K104P63124 156 aa13.39□□□□□ -0.27
R3HDM4-206ENST00000590454 COX17Q14061 63 aa13.39□□□□□ -0.27
R3HDM4-206ENST00000590454 SND1-IT1Q9HBX3 110 aa13.39□□□□□ -0.27
R3HDM4-206ENST00000590454 RPL37AP61513 92 aaKnown RBP13.37□□□□□ -0.27
R3HDM4-206ENST00000590454 MEIG1Q5JSS6 88 aa13.37□□□□□ -0.27
R3HDM4-206ENST00000590454 NMUP48645 174 aa13.36□□□□□ -0.27
R3HDM4-206ENST00000590454 SCGB1D1O95968 90 aa13.35□□□□□ -0.27
R3HDM4-206ENST00000590454 KRTAP11-1Q8IUC1 163 aa13.34□□□□□ -0.27
R3HDM4-206ENST00000590454 Q8NDZ9 215 aa13.34□□□□□ -0.27
R3HDM4-206ENST00000590454 A0A0J9YXY3 114 aa13.33□□□□□ -0.28
R3HDM4-206ENST00000590454 M0QXV9 152 aa13.33□□□□□ -0.28
R3HDM4-206ENST00000590454 MIR7-3HGQ8N6C7 128 aa13.33□□□□□ -0.28
R3HDM4-206ENST00000590454 DAND5Q8N907 189 aa13.33□□□□□ -0.28
R3HDM4-206ENST00000590454 AKR1D1P51857 326 aa13.32□□□□□ -0.28
R3HDM4-206ENST00000590454 C7orf33Q8WU49 177 aa13.32□□□□□ -0.28
R3HDM4-206ENST00000590454 HNRNPA3P51991 378 aaKnown RBP13.31□□□□□ -0.28
R3HDM4-206ENST00000590454 C22orf24Q9Y442 160 aa13.31□□□□□ -0.28
R3HDM4-206ENST00000590454 ZNF815PA8K554 130 aa13.3□□□□□ -0.28
R3HDM4-206ENST00000590454 ADAMTSL4-AS1Q5T5F5 129 aa13.3□□□□□ -0.28
R3HDM4-206ENST00000590454 PCP2Q8IVA1 136 aa13.3□□□□□ -0.28
R3HDM4-206ENST00000590454 MT1HL1P0DM35 61 aa13.29□□□□□ -0.28
R3HDM4-206ENST00000590454 LINC00587B1AMM8 73 aa13.27□□□□□ -0.29
R3HDM4-206ENST00000590454 VPREB1P12018 145 aa13.27□□□□□ -0.29
R3HDM4-206ENST00000590454 IGLV5-37A0A075B6J1 123 aa13.26□□□□□ -0.29
R3HDM4-206ENST00000590454 PRR3P79522 188 aaKnown RBP13.26□□□□□ -0.29
R3HDM4-206ENST00000590454 LITAFQ99732 161 aa13.26□□□□□ -0.29
R3HDM4-206ENST00000590454 EIF4EBP3O60516 100 aaPredicted RBP13.25□□□□□ -0.29
R3HDM4-206ENST00000590454 JOSD1Q15040 202 aaPredicted RBP13.25□□□□□ -0.29
R3HDM4-206ENST00000590454 PKHD1L1Q86WI1 4243 aa13.25□□□□□ -0.29
R3HDM4-206ENST00000590454 GAGE10A6NGK3 116 aa13.24□□□□□ -0.29
R3HDM4-206ENST00000590454 MRPL55Q7Z7F7 128 aaKnown RBP13.24□□□□□ -0.29
R3HDM4-206ENST00000590454 PSORS1C2Q9UIG4 136 aa13.24□□□□□ -0.29
R3HDM4-206ENST00000590454 HSBP1L1C9JCN9 74 aa13.23□□□□□ -0.29
R3HDM4-206ENST00000590454 NPC2P61916 151 aa13.23□□□□□ -0.29
R3HDM4-206ENST00000590454 SOSTDC1Q6X4U4 206 aa13.23□□□□□ -0.29
R3HDM4-206ENST00000590454 LINC00167Q96N53 147 aa13.23□□□□□ -0.29
R3HDM4-206ENST00000590454 TP73-AS1Q9UF72 201 aa13.23□□□□□ -0.29
R3HDM4-206ENST00000590454 UBE2BP63146 152 aa13.22□□□□□ -0.29
R3HDM4-206ENST00000590454 BOD1L2Q8IYS8 172 aa13.22□□□□□ -0.29
R3HDM4-206ENST00000590454 NKAPP1Q8N9T2 125 aa13.22□□□□□ -0.29
R3HDM4-206ENST00000590454 RPL37AP8A6NKH3 93 aa13.21□□□□□ -0.29
R3HDM4-206ENST00000590454 TIMM17BO60830 172 aa13.2□□□□□ -0.3
R3HDM4-206ENST00000590454 LBHQ53QV2 105 aaPredicted RBP13.2□□□□□ -0.3
R3HDM4-206ENST00000590454 PYY3Q5JQD4 70 aa13.2□□□□□ -0.3
R3HDM4-206ENST00000590454 LOC107984156A0A0G2JMH3 177 aa13.19□□□□□ -0.3
R3HDM4-206ENST00000590454 RPL24P83731 157 aaKnown RBP13.19□□□□□ -0.3
R3HDM4-206ENST00000590454 ARL17AQ8IVW1 177 aa13.19□□□□□ -0.3
R3HDM4-206ENST00000590454 C1orf137Q5JT78 98 aa13.18□□□□□ -0.3
R3HDM4-206ENST00000590454 SCGB1D4Q6XE38 83 aa13.18□□□□□ -0.3
R3HDM4-206ENST00000590454 RNF213Q63HN8 5207 aa13.17□□□□□ -0.3
R3HDM4-206ENST00000590454 NCR3O14931 201 aa13.17□□□□□ -0.3
R3HDM4-206ENST00000590454 PAM16Q9Y3D7 125 aa13.16□□□□□ -0.3
R3HDM4-206ENST00000590454 IGKV2-28A0A075B6P5 120 aa13.15□□□□□ -0.3
R3HDM4-206ENST00000590454 IGKV2D-28P01615 120 aa13.15□□□□□ -0.3
R3HDM4-206ENST00000590454 LINC00308Q8TCZ7 52 aa13.15□□□□□ -0.3
R3HDM4-206ENST00000590454 LRP2P98164 4655 aa13.13□□□□□ -0.31
R3HDM4-206ENST00000590454 SPATA45Q537H7 98 aa13.13□□□□□ -0.31
R3HDM4-206ENST00000590454 MIEN1Q9BRT3 115 aa13.13□□□□□ -0.31
R3HDM4-206ENST00000590454 VAMP8Q9BV40 100 aa13.13□□□□□ -0.31
R3HDM4-206ENST00000590454 IGLV1-50A0A075B6I6 118 aa13.12□□□□□ -0.31
R3HDM4-206ENST00000590454 M0R378 163 aa13.12□□□□□ -0.31
R3HDM4-206ENST00000590454 COX8AP10176 69 aa13.11□□□□□ -0.31
R3HDM4-206ENST00000590454 C14orf144Q96I85 54 aa13.11□□□□□ -0.31
R3HDM4-206ENST00000590454 SPANXDQ9BXN6 97 aa13.11□□□□□ -0.31
R3HDM4-206ENST00000590454 SPANXCQ9NY87 97 aa13.11□□□□□ -0.31
R3HDM4-206ENST00000590454 TMEM238C9JI98 176 aa13.1□□□□□ -0.31
R3HDM4-206ENST00000590454 IGLV7-43P04211 117 aa13.1□□□□□ -0.31
R3HDM4-206ENST00000590454 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
R3HDM4-206ENST00000590454 NDUFC2O95298 119 aa13.08□□□□□ -0.32
R3HDM4-206ENST00000590454 TRBV10-3A0A0K0K1G6 114 aa13.06□□□□□ -0.32
R3HDM4-206ENST00000590454 MUSTN1Q8IVN3 82 aa13.06□□□□□ -0.32
R3HDM4-206ENST00000590454 SPANXB1Q9NS25 103 aaPredicted RBP13.06□□□□□ -0.32
R3HDM4-206ENST00000590454 TRBV10-2A0A0K0K1G8 114 aa13.05□□□□□ -0.32
R3HDM4-206ENST00000590454 TNXBP22105 4242 aa13.04□□□□□ -0.32
R3HDM4-206ENST00000590454 DLEU1O43261 78 aa13.04□□□□□ -0.32
R3HDM4-206ENST00000590454 BCE1O60756 84 aa13.04□□□□□ -0.32
R3HDM4-206ENST00000590454 TMEM126AQ9H061 195 aa13.04□□□□□ -0.32
R3HDM4-206ENST00000590454 IFITM1P13164 125 aa13.02□□□□□ -0.33
R3HDM4-206ENST00000590454 REG3GQ6UW15 175 aa13.02□□□□□ -0.33
R3HDM4-206ENST00000590454 SPINK6Q6UWN8 80 aa13.02□□□□□ -0.33
R3HDM4-206ENST00000590454 Q6ZVH6 145 aa13.02□□□□□ -0.33
R3HDM4-206ENST00000590454 DDTP30046 118 aa13.01□□□□□ -0.33
R3HDM4-206ENST00000590454 IGLV6-57P01721 117 aa13□□□□□ -0.33
R3HDM4-206ENST00000590454 SLC25A34Q6PIV7 304 aa13□□□□□ -0.33
R3HDM4-206ENST00000590454 LINC01600Q96MT4 127 aa13□□□□□ -0.33
R3HDM4-206ENST00000590454 C2orf91Q6ZV80 131 aa12.99□□□□□ -0.33
R3HDM4-206ENST00000590454 KRTAP13-1Q8IUC0 172 aa12.99□□□□□ -0.33
R3HDM4-206ENST00000590454 KCNQ1DNQ9H478 68 aa12.99□□□□□ -0.33
R3HDM4-206ENST00000590454 ZNF861PO60384 105 aa12.98□□□□□ -0.33
R3HDM4-206ENST00000590454 PRLHP81277 87 aa12.98□□□□□ -0.33
R3HDM4-206ENST00000590454 LINC00337Q8N6G1 96 aa12.98□□□□□ -0.33
R3HDM4-206ENST00000590454 PPDPFQ9H3Y8 114 aa12.98□□□□□ -0.33
R3HDM4-206ENST00000590454 LOC105371267A0A1B0GV96 52 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms