RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 Q6ZRU5 148 aa10.16□□□□□ -0.78
SMARCA4-214ENST00000589677 CCDC168Q8NDH2 2452 aa10.16□□□□□ -0.78
SMARCA4-214ENST00000589677 LINC00336Q6ZUF6 198 aa10.13□□□□□ -0.79
SMARCA4-214ENST00000589677 SERTAD4-AS1Q5TG53 156 aa10.13□□□□□ -0.79
SMARCA4-214ENST00000589677 TRIOO75962 3097 aa10.13□□□□□ -0.79
SMARCA4-214ENST00000589677 LYPD5Q6UWN5 251 aa10.12□□□□□ -0.79
SMARCA4-214ENST00000589677 COL4A2P08572 1712 aa10.12□□□□□ -0.79
SMARCA4-214ENST00000589677 SZT2Q5T011 3432 aa10.12□□□□□ -0.79
SMARCA4-214ENST00000589677 INAFM1C9JVW0 142 aa10.11□□□□□ -0.79
SMARCA4-214ENST00000589677 KLK9Q2XQG4 91 aa10.1□□□□□ -0.79
SMARCA4-214ENST00000589677 SPAG11AQ6PDA7 123 aa10.1□□□□□ -0.79
SMARCA4-214ENST00000589677 CYP4F30PQ9H0H9 118 aa10.1□□□□□ -0.79
SMARCA4-214ENST00000589677 Q8NBF4 154 aa10.1□□□□□ -0.79
SMARCA4-214ENST00000589677 Q6ZTC4 211 aa10.1□□□□□ -0.79
SMARCA4-214ENST00000589677 A0A1B0GU69 56 aa10.09□□□□□ -0.79
SMARCA4-214ENST00000589677 WIPF1O43516 503 aa10.09□□□□□ -0.79
SMARCA4-214ENST00000589677 LY6G6DO95868 133 aa10.08□□□□□ -0.8
SMARCA4-214ENST00000589677 CD164Q04900 197 aa10.07□□□□□ -0.8
SMARCA4-214ENST00000589677 C6orf48Q9UBA6 75 aa10.07□□□□□ -0.8
SMARCA4-214ENST00000589677 C22orf24Q9Y442 160 aa10.07□□□□□ -0.8
SMARCA4-214ENST00000589677 ACYP2P14621 99 aa10.07□□□□□ -0.8
SMARCA4-214ENST00000589677 H7BZZ5 65 aa10.06□□□□□ -0.8
SMARCA4-214ENST00000589677 XIRP2A4UGR9 3374 aa10.06□□□□□ -0.8
SMARCA4-214ENST00000589677 HIVEP3Q5T1R4 2406 aa10.05□□□□□ -0.8
SMARCA4-214ENST00000589677 A0A1W2PPR1 153 aa10.05□□□□□ -0.8
SMARCA4-214ENST00000589677 C8orf87E5RJ46 101 aa10.05□□□□□ -0.8
SMARCA4-214ENST00000589677 VPREB1P12018 145 aa10.05□□□□□ -0.8
SMARCA4-214ENST00000589677 C16orf95Q9H693 158 aa10.05□□□□□ -0.8
SMARCA4-214ENST00000589677 SPTBN4Q9H254 2564 aa10.05□□□□□ -0.8
SMARCA4-214ENST00000589677 A8MUN3 132 aa10.04□□□□□ -0.8
SMARCA4-214ENST00000589677 LINC01600Q96MT4 127 aa10.03□□□□□ -0.8
SMARCA4-214ENST00000589677 TRAV22A0A0B4J277 110 aa10.03□□□□□ -0.8
SMARCA4-214ENST00000589677 PTPRBP23467 1997 aa10.02□□□□□ -0.8
SMARCA4-214ENST00000589677 PRLHP81277 87 aa10.02□□□□□ -0.8
SMARCA4-214ENST00000589677 CIRBP-AS1Q8TBR5 109 aa10.02□□□□□ -0.81
SMARCA4-214ENST00000589677 FASNP49327 2511 aaKnown RBP10.01□□□□□ -0.81
SMARCA4-214ENST00000589677 IGLV6-57P01721 117 aa10.01□□□□□ -0.81
SMARCA4-214ENST00000589677 Q6ZRX8 168 aa10□□□□□ -0.81
SMARCA4-214ENST00000589677 LINC00167Q96N53 147 aa10□□□□□ -0.81
SMARCA4-214ENST00000589677 EIF4EBP3O60516 100 aaPredicted RBP10□□□□□ -0.81
SMARCA4-214ENST00000589677 KRTAP10-9P60411 292 aa10□□□□□ -0.81
SMARCA4-214ENST00000589677 CEP295Q9C0D2 2601 aa9.99□□□□□ -0.81
SMARCA4-214ENST00000589677 A0A0C4DFX4 3053 aa9.99□□□□□ -0.81
SMARCA4-214ENST00000589677 REV3LO60673 3130 aa9.99□□□□□ -0.81
SMARCA4-214ENST00000589677 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
SMARCA4-214ENST00000589677 SPINK1P00995 79 aa9.99□□□□□ -0.81
SMARCA4-214ENST00000589677 FSHBP01225 129 aa9.98□□□□□ -0.81
SMARCA4-214ENST00000589677 TRBV7-4A0A0J9YYF1 115 aa9.98□□□□□ -0.81
SMARCA4-214ENST00000589677 LINC00476Q8WZB0 136 aa9.98□□□□□ -0.81
SMARCA4-214ENST00000589677 DNAH14Q0VDD8 3507 aa9.97□□□□□ -0.81
SMARCA4-214ENST00000589677 RETNLBQ9BQ08 111 aa9.97□□□□□ -0.81
SMARCA4-214ENST00000589677 ZNF462Q96JM2 2506 aa9.96□□□□□ -0.82
SMARCA4-214ENST00000589677 ATP11AUNQ6ZP68 121 aa9.96□□□□□ -0.82
SMARCA4-214ENST00000589677 ANKRD11Q6UB99 2663 aaPredicted RBP9.95□□□□□ -0.82
SMARCA4-214ENST00000589677 LINC01556Q5JQF7 62 aa9.94□□□□□ -0.82
SMARCA4-214ENST00000589677 MYO9AB2RTY4 2548 aa9.94□□□□□ -0.82
SMARCA4-214ENST00000589677 COA5Q86WW8 74 aa9.94□□□□□ -0.82
SMARCA4-214ENST00000589677 KTN1-AS1Q86SY8 53 aa9.93□□□□□ -0.82
SMARCA4-214ENST00000589677 ABCA2Q9BZC7 2435 aa9.93□□□□□ -0.82
SMARCA4-214ENST00000589677 LOC101927531A0A1B0GV80 90 aa9.92□□□□□ -0.82
SMARCA4-214ENST00000589677 EYSQ5T1H1 3165 aa9.92□□□□□ -0.82
SMARCA4-214ENST00000589677 OXLD1Q5BKU9 147 aa9.91□□□□□ -0.82
SMARCA4-214ENST00000589677 M0R2N4 97 aa9.91□□□□□ -0.82
SMARCA4-214ENST00000589677 K7EQZ3 153 aa9.91□□□□□ -0.82
SMARCA4-214ENST00000589677 C7orf65Q6ZTY9 151 aa9.9□□□□□ -0.82
SMARCA4-214ENST00000589677 LAMA1P25391 3075 aa9.89□□□□□ -0.83
SMARCA4-214ENST00000589677 H3BNG1 76 aa9.89□□□□□ -0.83
SMARCA4-214ENST00000589677 PRR15Q8IV56 129 aa9.89□□□□□ -0.83
SMARCA4-214ENST00000589677 MOBPQ13875 183 aa9.88□□□□□ -0.83
SMARCA4-214ENST00000589677 A8MWP4 228 aa9.88□□□□□ -0.83
SMARCA4-214ENST00000589677 ST20-AS1Q8NBB2 130 aa9.88□□□□□ -0.83
SMARCA4-214ENST00000589677 IGKV2D-30A0A075B6S6 120 aa9.86□□□□□ -0.83
SMARCA4-214ENST00000589677 IGKV2-30P06310 120 aa9.86□□□□□ -0.83
SMARCA4-214ENST00000589677 RPL37AP61513 92 aaKnown RBP9.86□□□□□ -0.83
SMARCA4-214ENST00000589677 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
SMARCA4-214ENST00000589677 OBSCN-AS1Q96MR7 158 aa9.86□□□□□ -0.83
SMARCA4-214ENST00000589677 X6R8D5 127 aa9.85□□□□□ -0.83
SMARCA4-214ENST00000589677 LCA10Q71F78 164 aa9.85□□□□□ -0.83
SMARCA4-214ENST00000589677 SMR3AQ99954 134 aa9.85□□□□□ -0.83
SMARCA4-214ENST00000589677 EPG5Q9HCE0 2579 aa9.84□□□□□ -0.83
SMARCA4-214ENST00000589677 JMJD1CQ15652 2540 aa9.84□□□□□ -0.83
SMARCA4-214ENST00000589677 ZFYVE26Q68DK2 2539 aa9.84□□□□□ -0.83
SMARCA4-214ENST00000589677 C9orf129Q5T035 196 aaKnown RBP9.83□□□□□ -0.84
SMARCA4-214ENST00000589677 PRRC2CQ9Y520 2896 aaKnown RBP9.83□□□□□ -0.84
SMARCA4-214ENST00000589677 SPTBN5Q9NRC6 3674 aaKnown RBP9.83□□□□□ -0.84
SMARCA4-214ENST00000589677 KCNQ1DNQ9H478 68 aa9.82□□□□□ -0.84
SMARCA4-214ENST00000589677 VCANP13611 3396 aa9.82□□□□□ -0.84
SMARCA4-214ENST00000589677 LRRK2Q5S007 2527 aa9.82□□□□□ -0.84
SMARCA4-214ENST00000589677 NUPR2A6NF83 97 aa9.81□□□□□ -0.84
SMARCA4-214ENST00000589677 USP9XQ93008 2570 aaPredicted RBP9.81□□□□□ -0.84
SMARCA4-214ENST00000589677 UQCR11O14957 56 aa9.8□□□□□ -0.84
SMARCA4-214ENST00000589677 COL27A1Q8IZC6 1860 aaPredicted RBP9.8□□□□□ -0.84
SMARCA4-214ENST00000589677 Q6ZRP5 223 aa9.8□□□□□ -0.84
SMARCA4-214ENST00000589677 IGLV5-52A0A0A0MRZ9 124 aa9.79□□□□□ -0.84
SMARCA4-214ENST00000589677 SPANXA2-OT1Q8N9U9 137 aa9.78□□□□□ -0.84
SMARCA4-214ENST00000589677 Q1T7F1 81 aa9.78□□□□□ -0.84
SMARCA4-214ENST00000589677 EPM2AB3EWF7 344 aa9.77□□□□□ -0.85
SMARCA4-214ENST00000589677 MUC4Q99102 2169 aa9.76□□□□□ -0.85
SMARCA4-214ENST00000589677 ABCA12Q86UK0 2595 aa9.76□□□□□ -0.85
SMARCA4-214ENST00000589677 MRPL34Q9BQ48 92 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms