RNA–Protein interactions for RNA: ENST00000589559.5

RBM42-204, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,328 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-204ENST00000589559 NMUP48645 174 aa12.44□□□□□ -0.42
RBM42-204ENST00000589559 MRPL55Q7Z7F7 128 aaKnown RBP12.44□□□□□ -0.42
RBM42-204ENST00000589559 NKAPP1Q8N9T2 125 aa12.44□□□□□ -0.42
RBM42-204ENST00000589559 NDUFA12Q9UI09 145 aa12.44□□□□□ -0.42
RBM42-204ENST00000589559 REG3GQ6UW15 175 aa12.43□□□□□ -0.42
RBM42-204ENST00000589559 KRTAP7-1Q8IUC3 87 aa12.43□□□□□ -0.42
RBM42-204ENST00000589559 DMBT1Q9UGM3 2413 aaPredicted RBP12.43□□□□□ -0.42
RBM42-204ENST00000589559 IGLV5-37A0A075B6J1 123 aa12.42□□□□□ -0.42
RBM42-204ENST00000589559 HNRNPA3P51991 378 aaKnown RBP12.42□□□□□ -0.42
RBM42-204ENST00000589559 KRTDAPP60985 99 aa12.42□□□□□ -0.42
RBM42-204ENST00000589559 SRSF9Q13242 221 aaKnown RBP eCLIP12.42□□□□□ -0.42
RBM42-204ENST00000589559 MEIG1Q5JSS6 88 aa12.42□□□□□ -0.42
RBM42-204ENST00000589559 SERTAD4-AS1Q5TG53 156 aa12.42□□□□□ -0.42
RBM42-204ENST00000589559 SND1-IT1Q9HBX3 110 aa12.42□□□□□ -0.42
RBM42-204ENST00000589559 S100A2P29034 98 aa12.41□□□□□ -0.42
RBM42-204ENST00000589559 J3QQQ9 107 aa12.4□□□□□ -0.42
RBM42-204ENST00000589559 LGALS3P17931 250 aaKnown RBP12.4□□□□□ -0.42
RBM42-204ENST00000589559 FAT3Q8TDW7 4589 aa12.4□□□□□ -0.42
RBM42-204ENST00000589559 C20orf202A1L168 122 aa12.39□□□□□ -0.43
RBM42-204ENST00000589559 IGLV7-43P04211 117 aa12.39□□□□□ -0.43
RBM42-204ENST00000589559 DIRC1Q969H9 104 aa12.37□□□□□ -0.43
RBM42-204ENST00000589559 LRP1Q07954 4544 aaKnown RBP12.37□□□□□ -0.43
RBM42-204ENST00000589559 E9PLD3 99 aa12.37□□□□□ -0.43
RBM42-204ENST00000589559 LINC00167Q96N53 147 aa12.37□□□□□ -0.43
RBM42-204ENST00000589559 SMIM13P0DJ93 91 aa12.36□□□□□ -0.43
RBM42-204ENST00000589559 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
RBM42-204ENST00000589559 A0A0U1RRA0 63 aa12.33□□□□□ -0.44
RBM42-204ENST00000589559 VPREB1P12018 145 aa12.33□□□□□ -0.44
RBM42-204ENST00000589559 HERC1Q15751 4861 aa12.32□□□□□ -0.44
RBM42-204ENST00000589559 MIR7-3HGQ8N6C7 128 aa12.32□□□□□ -0.44
RBM42-204ENST00000589559 LINC01600Q96MT4 127 aa12.32□□□□□ -0.44
RBM42-204ENST00000589559 TMA7Q9Y2S6 64 aaKnown RBP12.32□□□□□ -0.44
RBM42-204ENST00000589559 KRTAP11-1Q8IUC1 163 aa12.31□□□□□ -0.44
RBM42-204ENST00000589559 IGKV2D-26A0A0A0MRZ7 120 aa12.3□□□□□ -0.44
RBM42-204ENST00000589559 ZNF861PO60384 105 aa12.3□□□□□ -0.44
RBM42-204ENST00000589559 BCE1O60756 84 aa12.3□□□□□ -0.44
RBM42-204ENST00000589559 RPL28P46779 137 aaKnown RBP12.3□□□□□ -0.44
RBM42-204ENST00000589559 MIEN1Q9BRT3 115 aa12.3□□□□□ -0.44
RBM42-204ENST00000589559 GAGE10A6NGK3 116 aa12.29□□□□□ -0.44
RBM42-204ENST00000589559 RPL37AP8A6NKH3 93 aa12.29□□□□□ -0.44
RBM42-204ENST00000589559 M0R378 163 aa12.29□□□□□ -0.44
RBM42-204ENST00000589559 ATOH7Q8N100 152 aa12.29□□□□□ -0.44
RBM42-204ENST00000589559 LOC107984156A0A0G2JMH3 177 aa12.28□□□□□ -0.44
RBM42-204ENST00000589559 H0Y9J4 135 aa12.28□□□□□ -0.44
RBM42-204ENST00000589559 S100A12P80511 92 aa12.28□□□□□ -0.44
RBM42-204ENST00000589559 ARL17AQ8IVW1 177 aa12.28□□□□□ -0.44
RBM42-204ENST00000589559 BOD1L2Q8IYS8 172 aa12.28□□□□□ -0.44
RBM42-204ENST00000589559 IGLV1-50A0A075B6I6 118 aa12.27□□□□□ -0.45
RBM42-204ENST00000589559 ANKRD39Q53RE8 183 aa12.25□□□□□ -0.45
RBM42-204ENST00000589559 IGKV2-28A0A075B6P5 120 aa12.24□□□□□ -0.45
RBM42-204ENST00000589559 IGKV2D-28P01615 120 aa12.24□□□□□ -0.45
RBM42-204ENST00000589559 A0A0J9YXY3 114 aa12.23□□□□□ -0.45
RBM42-204ENST00000589559 TIMM17BO60830 172 aa12.22□□□□□ -0.45
RBM42-204ENST00000589559 UBE2AP49459 152 aa12.22□□□□□ -0.45
RBM42-204ENST00000589559 TRBV10-2A0A0K0K1G8 114 aa12.21□□□□□ -0.45
RBM42-204ENST00000589559 NDUFC2O95298 119 aa12.21□□□□□ -0.45
RBM42-204ENST00000589559 ZNF815PA8K554 130 aa12.2□□□□□ -0.46
RBM42-204ENST00000589559 TTTY13Q9BZ97 58 aa12.2□□□□□ -0.46
RBM42-204ENST00000589559 SCGB1D1O95968 90 aa12.19□□□□□ -0.46
RBM42-204ENST00000589559 COPS9Q8WXC6 57 aa12.19□□□□□ -0.46
RBM42-204ENST00000589559 TMEM126AQ9H061 195 aa12.19□□□□□ -0.46
RBM42-204ENST00000589559 CBY1Q9Y3M2 126 aa12.19□□□□□ -0.46
RBM42-204ENST00000589559 HSBP1L1C9JCN9 74 aa12.18□□□□□ -0.46
RBM42-204ENST00000589559 MT1HL1P0DM35 61 aa12.17□□□□□ -0.46
RBM42-204ENST00000589559 JOSD1Q15040 202 aaPredicted RBP12.17□□□□□ -0.46
RBM42-204ENST00000589559 DAND5Q8N907 189 aa12.17□□□□□ -0.46
RBM42-204ENST00000589559 SPANXB1Q9NS25 103 aaPredicted RBP12.17□□□□□ -0.46
RBM42-204ENST00000589559 PRYO14603 147 aa12.16□□□□□ -0.46
RBM42-204ENST00000589559 KRTAP10-8P60410 259 aa12.16□□□□□ -0.46
RBM42-204ENST00000589559 FAM19A1Q7Z5A9 133 aa12.16□□□□□ -0.46
RBM42-204ENST00000589559 RPL13AP40429 203 aaKnown RBP12.15□□□□□ -0.46
RBM42-204ENST00000589559 SCGB1D4Q6XE38 83 aa12.15□□□□□ -0.46
RBM42-204ENST00000589559 Q8NDZ9 215 aa12.15□□□□□ -0.46
RBM42-204ENST00000589559 TNXBP22105 4242 aa12.15□□□□□ -0.46
RBM42-204ENST00000589559 NCR3O14931 201 aa12.14□□□□□ -0.47
RBM42-204ENST00000589559 PCP2Q8IVA1 136 aa12.14□□□□□ -0.47
RBM42-204ENST00000589559 KCNQ1DNQ9H478 68 aa12.14□□□□□ -0.47
RBM42-204ENST00000589559 TMEM238C9JI98 176 aa12.13□□□□□ -0.47
RBM42-204ENST00000589559 S100A7L2Q5SY68 101 aa12.13□□□□□ -0.47
RBM42-204ENST00000589559 ADAMTSL4-AS1Q5T5F5 129 aa12.13□□□□□ -0.47
RBM42-204ENST00000589559 Q6ZVH6 145 aa12.13□□□□□ -0.47
RBM42-204ENST00000589559 LITAFQ99732 161 aa12.13□□□□□ -0.47
RBM42-204ENST00000589559 DDTP30046 118 aa12.11□□□□□ -0.47
RBM42-204ENST00000589559 PYY3Q5JQD4 70 aa12.11□□□□□ -0.47
RBM42-204ENST00000589559 KRTAP13-1Q8IUC0 172 aa12.11□□□□□ -0.47
RBM42-204ENST00000589559 LINC00337Q8N6G1 96 aa12.11□□□□□ -0.47
RBM42-204ENST00000589559 SPANXCQ9NY87 97 aa12.11□□□□□ -0.47
RBM42-204ENST00000589559 LINC00518Q8N0U6 118 aa12.11□□□□□ -0.47
RBM42-204ENST00000589559 LINC00308Q8TCZ7 52 aa12.11□□□□□ -0.47
RBM42-204ENST00000589559 TRBV10-3A0A0K0K1G6 114 aa12.1□□□□□ -0.47
RBM42-204ENST00000589559 ETDCA0A1B0GVM5 59 aa12.09□□□□□ -0.47
RBM42-204ENST00000589559 IFITM1P13164 125 aa12.09□□□□□ -0.47
RBM42-204ENST00000589559 PPDPFQ9H3Y8 114 aa12.09□□□□□ -0.47
RBM42-204ENST00000589559 KRTAP1-4P0C5Y4 121 aa12.08□□□□□ -0.48
RBM42-204ENST00000589559 SPRR1AP35321 89 aa12.08□□□□□ -0.48
RBM42-204ENST00000589559 SPANXDQ9BXN6 97 aa12.08□□□□□ -0.48
RBM42-204ENST00000589559 EIF4EBP3O60516 100 aaPredicted RBP12.07□□□□□ -0.48
RBM42-204ENST00000589559 NPC2P61916 151 aa12.07□□□□□ -0.48
RBM42-204ENST00000589559 PRLHP81277 87 aa12.07□□□□□ -0.48
RBM42-204ENST00000589559 SOSTDC1Q6X4U4 206 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms