RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 VAMP3Q15836 100 aa7.44□□□□□ -1.22
SMAD4-205ENST00000588745 Q1RN00 199 aa7.44□□□□□ -1.22
SMAD4-205ENST00000588745 KMT2AQ03164 3969 aa7.43□□□□□ -1.22
SMAD4-205ENST00000588745 TRAV13-2A0A0B4J235 113 aa7.43□□□□□ -1.22
SMAD4-205ENST00000588745 LRCOL1A6NCL2 159 aa7.43□□□□□ -1.22
SMAD4-205ENST00000588745 TLX1NBP0CAT3 122 aa7.43□□□□□ -1.22
SMAD4-205ENST00000588745 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
SMAD4-205ENST00000588745 Q6ZRP5 223 aa7.42□□□□□ -1.22
SMAD4-205ENST00000588745 LINC00337Q8N6G1 96 aa7.42□□□□□ -1.22
SMAD4-205ENST00000588745 XAGE1AQ9HD64 81 aa7.42□□□□□ -1.22
SMAD4-205ENST00000588745 RPL18AQ02543 176 aaKnown RBP7.41□□□□□ -1.22
SMAD4-205ENST00000588745 GAGE2EQ4V326 116 aa7.41□□□□□ -1.22
SMAD4-205ENST00000588745 LYRM7Q5U5X0 104 aa7.41□□□□□ -1.22
SMAD4-205ENST00000588745 Q8NDZ9 215 aa7.41□□□□□ -1.22
SMAD4-205ENST00000588745 GAGE2DQ9UEU5 116 aa7.41□□□□□ -1.22
SMAD4-205ENST00000588745 SPCS1Q9Y6A9 102 aa7.41□□□□□ -1.22
SMAD4-205ENST00000588745 K7EP34 96 aa7.4□□□□□ -1.22
SMAD4-205ENST00000588745 DNAH17Q9UFH2 4485 aa7.39□□□□□ -1.23
SMAD4-205ENST00000588745 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-205ENST00000588745 NCR3O14931 201 aa7.39□□□□□ -1.23
SMAD4-205ENST00000588745 PSMB2P49721 201 aa7.39□□□□□ -1.23
SMAD4-205ENST00000588745 HYDINQ4G0P3 5121 aa7.38□□□□□ -1.23
SMAD4-205ENST00000588745 LOC107984640A0A0U1RRK4 108 aa7.38□□□□□ -1.23
SMAD4-205ENST00000588745 GAGE10A6NGK3 116 aa7.38□□□□□ -1.23
SMAD4-205ENST00000588745 TRIAP1O43715 76 aa7.38□□□□□ -1.23
SMAD4-205ENST00000588745 UBE2V1Q13404 147 aa7.38□□□□□ -1.23
SMAD4-205ENST00000588745 C9orf129Q5T035 196 aaKnown RBP7.38□□□□□ -1.23
SMAD4-205ENST00000588745 C1orf134Q5TEV5 83 aa7.38□□□□□ -1.23
SMAD4-205ENST00000588745 GTF2H5Q6ZYL4 71 aa7.38□□□□□ -1.23
SMAD4-205ENST00000588745 SACSQ9NZJ4 4579 aa7.38□□□□□ -1.23
SMAD4-205ENST00000588745 TRBV10-2A0A0K0K1G8 114 aa7.37□□□□□ -1.23
SMAD4-205ENST00000588745 VPREB1P12018 145 aa7.37□□□□□ -1.23
SMAD4-205ENST00000588745 PRR3P79522 188 aaKnown RBP7.37□□□□□ -1.23
SMAD4-205ENST00000588745 Q8N814 137 aa7.37□□□□□ -1.23
SMAD4-205ENST00000588745 OR13C6PQ8NH95 151 aa7.37□□□□□ -1.23
SMAD4-205ENST00000588745 A0A087WTM6 91 aa7.36□□□□□ -1.23
SMAD4-205ENST00000588745 SCGB1C2P0DMR2 95 aa7.36□□□□□ -1.23
SMAD4-205ENST00000588745 RPL28P46779 137 aaKnown RBP7.36□□□□□ -1.23
SMAD4-205ENST00000588745 COX6CP09669 75 aa7.35□□□□□ -1.23
SMAD4-205ENST00000588745 GAGE2BQ13066 116 aa7.35□□□□□ -1.23
SMAD4-205ENST00000588745 TMEM126AQ9H061 195 aa7.35□□□□□ -1.23
SMAD4-205ENST00000588745 TRBV20-1A0A075B6N2 111 aa7.34□□□□□ -1.23
SMAD4-205ENST00000588745 TCL1BO95988 128 aa7.34□□□□□ -1.23
SMAD4-205ENST00000588745 S100A7L2Q5SY68 101 aa7.34□□□□□ -1.23
SMAD4-205ENST00000588745 C9orf163Q8N9P6 203 aa7.34□□□□□ -1.23
SMAD4-205ENST00000588745 SMIM11BQ8TCY0 68 aa7.34□□□□□ -1.23
SMAD4-205ENST00000588745 PLA2G2DQ9UNK4 145 aa7.34□□□□□ -1.23
SMAD4-205ENST00000588745 PKIGQ9Y2B9 76 aa7.34□□□□□ -1.23
SMAD4-205ENST00000588745 A0A096LNI7 61 aa7.33□□□□□ -1.24
SMAD4-205ENST00000588745 C16orf90A8MZG2 172 aa7.33□□□□□ -1.24
SMAD4-205ENST00000588745 M0R378 163 aa7.33□□□□□ -1.24
SMAD4-205ENST00000588745 IGLV6-57P01721 117 aa7.33□□□□□ -1.24
SMAD4-205ENST00000588745 SERTAD4-AS1Q5TG53 156 aa7.33□□□□□ -1.24
SMAD4-205ENST00000588745 FRAS1Q86XX4 4008 aa7.32□□□□□ -1.24
SMAD4-205ENST00000588745 IGLV5-37A0A075B6J1 123 aa7.32□□□□□ -1.24
SMAD4-205ENST00000588745 TRBV10-3A0A0K0K1G6 114 aa7.32□□□□□ -1.24
SMAD4-205ENST00000588745 H3BMG7 143 aa7.32□□□□□ -1.24
SMAD4-205ENST00000588745 NKAPP1Q8N9T2 125 aa7.32□□□□□ -1.24
SMAD4-205ENST00000588745 HECTD4Q9Y4D8 3996 aa7.31□□□□□ -1.24
SMAD4-205ENST00000588745 DNAH11Q96DT5 4516 aa7.31□□□□□ -1.24
SMAD4-205ENST00000588745 FAM168BA1KXE4 195 aa7.31□□□□□ -1.24
SMAD4-205ENST00000588745 ATXN8Q156A1 80 aa7.31□□□□□ -1.24
SMAD4-205ENST00000588745 CLEC2BQ92478 149 aa7.31□□□□□ -1.24
SMAD4-205ENST00000588745 DNAH5Q8TE73 4624 aa7.3□□□□□ -1.24
SMAD4-205ENST00000588745 IGKV2-24A0A0C4DH68 120 aa7.3□□□□□ -1.24
SMAD4-205ENST00000588745 LST1O00453 97 aa7.3□□□□□ -1.24
SMAD4-205ENST00000588745 RTL8CO15255 209 aa7.3□□□□□ -1.24
SMAD4-205ENST00000588745 RYR2Q92736 4967 aa7.29□□□□□ -1.24
SMAD4-205ENST00000588745 TRAV23DV6A0A075B6W5 121 aa7.29□□□□□ -1.24
SMAD4-205ENST00000588745 LCE6AA0A183 80 aa7.29□□□□□ -1.24
SMAD4-205ENST00000588745 TNP2Q05952 138 aa7.29□□□□□ -1.24
SMAD4-205ENST00000588745 FAM19A5Q7Z5A7 132 aaPredicted RBP7.29□□□□□ -1.24
SMAD4-205ENST00000588745 KRTAP7-1Q8IUC3 87 aa7.29□□□□□ -1.24
SMAD4-205ENST00000588745 C7orf33Q8WU49 177 aa7.29□□□□□ -1.24
SMAD4-205ENST00000588745 H0YGX0 51 aa7.28□□□□□ -1.24
SMAD4-205ENST00000588745 LINC01620Q4KN68 170 aa7.28□□□□□ -1.24
SMAD4-205ENST00000588745 C6orf99Q4VX62 202 aa7.28□□□□□ -1.24
SMAD4-205ENST00000588745 SDIM1Q6ZPB5 146 aa7.28□□□□□ -1.24
SMAD4-205ENST00000588745 CBY1Q9Y3M2 126 aa7.28□□□□□ -1.24
SMAD4-205ENST00000588745 FAM218AQ96MZ4 157 aa7.27□□□□□ -1.25
SMAD4-205ENST00000588745 PRO0461Q9UI25 63 aa7.27□□□□□ -1.25
SMAD4-205ENST00000588745 FAT2Q9NYQ8 4349 aa7.27□□□□□ -1.25
SMAD4-205ENST00000588745 IGLV5-52A0A0A0MRZ9 124 aa7.26□□□□□ -1.25
SMAD4-205ENST00000588745 CHTF8P0CG12 524 aa7.26□□□□□ -1.25
SMAD4-205ENST00000588745 MTURNQ8N3F0 131 aa7.26□□□□□ -1.25
SMAD4-205ENST00000588745 DIRC1Q969H9 104 aa7.26□□□□□ -1.25
SMAD4-205ENST00000588745 LINC00474Q9P2X8 69 aa7.26□□□□□ -1.25
SMAD4-205ENST00000588745 C22orf24Q9Y442 160 aa7.26□□□□□ -1.25
SMAD4-205ENST00000588745 F8W1H4 67 aa7.25□□□□□ -1.25
SMAD4-205ENST00000588745 M0QXV9 152 aa7.25□□□□□ -1.25
SMAD4-205ENST00000588745 ZNF73O43830 326 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-205ENST00000588745 TRACP01848 142 aa7.25□□□□□ -1.25
SMAD4-205ENST00000588745 MRPL55Q7Z7F7 128 aaKnown RBP7.25□□□□□ -1.25
SMAD4-205ENST00000588745 A0A087WYN8 130 aa7.24□□□□□ -1.25
SMAD4-205ENST00000588745 A0A1W2PNN7 141 aa7.24□□□□□ -1.25
SMAD4-205ENST00000588745 C9JAW5 83 aa7.24□□□□□ -1.25
SMAD4-205ENST00000588745 FUSP35637 526 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMAD4-205ENST00000588745 LINC00167Q96N53 147 aa7.24□□□□□ -1.25
SMAD4-205ENST00000588745 KCNQ1DNQ9H478 68 aa7.24□□□□□ -1.25
SMAD4-205ENST00000588745 IGLV1-50A0A075B6I6 118 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms