RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 CACNA1EQ15878 2313 aa3.67□□□□□ -1.82
LINC01538-201ENST00000588074 IGHV3-72A0A0B4J1Y9 119 aa3.67□□□□□ -1.82
LINC01538-201ENST00000588074 A0A1W2PNM2 257 aa3.67□□□□□ -1.82
LINC01538-201ENST00000588074 PRB1P04280 392 aa3.67□□□□□ -1.82
LINC01538-201ENST00000588074 PRB3Q04118 309 aaPredicted RBP3.67□□□□□ -1.82
LINC01538-201ENST00000588074 U3KQA8 63 aa3.67□□□□□ -1.82
LINC01538-201ENST00000588074 IGLV1-44P01699 117 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 SPAG11BQ08648 103 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 OTOGLQ3ZCN5 2332 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 LINC00467Q9BRT7 94 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 IGHV3OR16-8A0A075B7F1 116 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 SPINK7P58062 85 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 MUC4Q99102 2169 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 GVINP1Q7Z2Y8 2422 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 IGHV3-66A0A0C4DH42 116 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 CASC10Q5T4H9 136 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 COA5Q86WW8 74 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 Q8N9L7 120 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 SPTBN2O15020 2390 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 SEC16AO15027 2179 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 HIGD2BQ4VC39 106 aa3.65□□□□□ -1.83
LINC01538-201ENST00000588074 TTTY12Q9BZ98 90 aa3.65□□□□□ -1.83
LINC01538-201ENST00000588074 CNTRLQ7Z7A1 2325 aa3.65□□□□□ -1.83
LINC01538-201ENST00000588074 CFAP47Q6ZTR5 3102 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 ZFHX4Q86UP3 3567 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 IGLV1-47P01700 117 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 CSAG1Q6PB30 78 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 SPAG11AQ6PDA7 123 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 FRYQ5TBA9 3013 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 H0Y9P7 68 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.63□□□□□ -1.83
LINC01538-201ENST00000588074 FAM186AA6NE01 2351 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 ASCC3Q8N3C0 2202 aaKnown RBP3.63□□□□□ -1.83
LINC01538-201ENST00000588074 CEP250Q9BV73 2442 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 PRB2P02812 416 aaPredicted RBP3.63□□□□□ -1.83
LINC01538-201ENST00000588074 KLK9Q2XQG4 91 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 ST20-AS1Q8NBB2 130 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 LOC400499M0QZD8 3231 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 ASXL3Q9C0F0 2248 aa3.62□□□□□ -1.83
LINC01538-201ENST00000588074 A0A1W2PNU3 283 aaPredicted RBP3.62□□□□□ -1.83
LINC01538-201ENST00000588074 Q6ZR54 194 aa3.62□□□□□ -1.83
LINC01538-201ENST00000588074 ZNF292O60281 2723 aa3.62□□□□□ -1.83
LINC01538-201ENST00000588074 CCL3L1P16619 93 aa3.62□□□□□ -1.83
LINC01538-201ENST00000588074 KPRPQ5T749 579 aaPredicted RBP3.62□□□□□ -1.83
LINC01538-201ENST00000588074 NPBQ8NG41 125 aa3.62□□□□□ -1.83
LINC01538-201ENST00000588074 CNOT1A5YKK6 2376 aaKnown RBP3.61□□□□□ -1.83
LINC01538-201ENST00000588074 LYPD2Q6UXB3 125 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 PTPRQQ9UMZ3 2332 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 TRGV4A0A0C4DH28 118 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 GIG44P09565 113 aaPredicted RBP3.61□□□□□ -1.83
LINC01538-201ENST00000588074 DEFB112Q30KQ8 113 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 CNEP1R1Q8N9A8 125 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 KRTAP16-1A8MUX0 517 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 IGKV2-30P06310 120 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 Q6ZQY7 126 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 PLCE1Q9P212 2302 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 A0A1W2PPR1 153 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 PIEZO1Q92508 2521 aa3.59□□□□□ -1.83
LINC01538-201ENST00000588074 SPENQ96T58 3664 aaKnown RBP3.59□□□□□ -1.83
LINC01538-201ENST00000588074 LINC00959A0A1B0GUT2 108 aa3.59□□□□□ -1.83
LINC01538-201ENST00000588074 IGHV1-46P01743 117 aa3.59□□□□□ -1.83
LINC01538-201ENST00000588074 MIR22HGQ0VDD5 57 aa3.59□□□□□ -1.83
LINC01538-201ENST00000588074 NCOR2Q9Y618 2525 aa3.59□□□□□ -1.83
LINC01538-201ENST00000588074 AKAP13Q12802 2813 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 SPTBN4Q9H254 2564 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 DMXL2Q8TDJ6 3036 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 IGHV3-74A0A0B4J1X5 117 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 COX17Q14061 63 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 SPATA8Q6RVD6 105 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 Q8NDZ9 215 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 DEFB108BQ8NET1 73 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 TOMM7Q9P0U1 55 aa3.57□□□□□ -1.84
LINC01538-201ENST00000588074 SMG1Q96Q15 3661 aaKnown RBP3.57□□□□□ -1.84
LINC01538-201ENST00000588074 SPINK14Q6IE38 97 aa3.56□□□□□ -1.84
LINC01538-201ENST00000588074 FAM215AQ9Y5M1 114 aa3.56□□□□□ -1.84
LINC01538-201ENST00000588074 CEP295Q9C0D2 2601 aa3.56□□□□□ -1.84
LINC01538-201ENST00000588074 KLK12Q9UKR0 248 aa3.56□□□□□ -1.84
LINC01538-201ENST00000588074 BOD1L1Q8NFC6 3051 aa3.56□□□□□ -1.84
LINC01538-201ENST00000588074 KRTAP19-1Q8IUB9 90 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 Q8N9W7 124 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 ZZEF1O43149 2961 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 AHCTF1Q8WYP5 2266 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 MSMBP08118 114 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 IGF2RP11717 2491 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 Q8IZM0 81 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 KAAG1Q9UBP8 84 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 MGAQ8IWI9 3026 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 CHD8Q9HCK8 2581 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 IGKV2D-24A0A075B6R9 120 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 ODF3BA8MYP8 253 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 IGLV6-57P01721 117 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 CMC4P56277 68 aaPredicted RBP3.54□□□□□ -1.84
LINC01538-201ENST00000588074 DEFB109BQ30KR1 87 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 DSCR10P59022 87 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 KRTAP24-1Q3LI83 254 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 SPRR4Q96PI1 79 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 ATMQ13315 3056 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms