RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 CLPSL2Q6UWE3 100 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 TIMM17AQ99595 171 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 TIMM21Q9BVV7 248 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 UBE2D4Q9Y2X8 147 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 FAT1Q14517 4588 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 IGLV10-54A0A075B6I4 117 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 TRAV8-4A0A0B4J246 113 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 LOC389332A0A1B0GUA5 103 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 LINC00959A0A1B0GUT2 108 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 IGIPA6NJ69 53 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 COLCA2A8K830 154 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 LECT2O14960 151 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 MT-ND6P03923 174 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 FCER1GP30273 86 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 IFI27P40305 119 aaPredicted RBP2.34□□□□□ -2.03
VMP1-205ENST00000587470 MRPS36P82909 103 aaKnown RBP2.34□□□□□ -2.03
VMP1-205ENST00000587470 FABP9Q0Z7S8 132 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 COX19Q49B96 90 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 Q6ZUT4 128 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 ZNF664Q8N3J9 261 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 Q8N814 137 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 Q8N8P6 123 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 OR5A1Q8NGJ0 315 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 MAP1LC3AQ9H492 121 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 NXT2Q9NPJ8 142 aaKnown RBP2.34□□□□□ -2.03
VMP1-205ENST00000587470 SMCO4Q9NRQ5 59 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 CRCT1Q9UGL9 99 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 DNAH8Q96JB1 4490 aa2.34□□□□□ -2.03
VMP1-205ENST00000587470 A0A096LNJ9 63 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 A0A0U1RQV1 116 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 FAM240AA0A1B0GVK7 77 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 K7EMI3 77 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 UBE2L6O14933 153 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 PSPHP1O15172 72 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 PSCAO43653 123 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 RNASE13Q5GAN3 156 aaKnown RBP2.33□□□□□ -2.04
VMP1-205ENST00000587470 AMMECR1LQ6DCA0 310 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 C18orf32Q8TCD1 76 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 RMI2Q96E14 147 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 AMELXQ99217 191 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 SPANXA1Q9NS26 97 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 TRAPPC1Q9Y5R8 145 aa2.33□□□□□ -2.04
VMP1-205ENST00000587470 IGKV3OR2-268A0A0C4DH90 116 aa2.32□□□□□ -2.04
VMP1-205ENST00000587470 CCL25O15444 150 aa2.32□□□□□ -2.04
VMP1-205ENST00000587470 SCO1O75880 301 aa2.32□□□□□ -2.04
VMP1-205ENST00000587470 CRPP02741 224 aa2.32□□□□□ -2.04
VMP1-205ENST00000587470 COX6A2Q02221 97 aa2.32□□□□□ -2.04
VMP1-205ENST00000587470 C5orf47Q569G3 176 aa2.32□□□□□ -2.04
VMP1-205ENST00000587470 Q6ZSA8 131 aa2.32□□□□□ -2.04
VMP1-205ENST00000587470 TOMM6Q96B49 74 aa2.32□□□□□ -2.04
VMP1-205ENST00000587470 CAMK2N2Q96S95 79 aa2.32□□□□□ -2.04
VMP1-205ENST00000587470 CYSLTR1Q9Y271 337 aa2.32□□□□□ -2.04
VMP1-205ENST00000587470 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.31□□□□□ -2.04
VMP1-205ENST00000587470 GVQW2A0A096LPI5 108 aaPredicted RBP2.31□□□□□ -2.04
VMP1-205ENST00000587470 TRAV13-1A0A0B4J241 112 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 C1orf196B1AJZ1 125 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 TRGC2P03986 189 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 LINC00614P0C842 121 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 XCL1P47992 114 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 UBE2D1P51668 147 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 CNBPP62633 177 aaKnown RBP2.31□□□□□ -2.04
VMP1-205ENST00000587470 SMAGPQ0VAQ4 97 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 SS18Q15532 418 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 C6orf99Q4VX62 202 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 PDZD11Q5EBL8 140 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 SDIM1Q6ZPB5 146 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 FAM19A3Q7Z5A8 133 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 C5orf38Q86SI9 138 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 C9orf163Q8N9P6 203 aa2.31□□□□□ -2.04
VMP1-205ENST00000587470 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
VMP1-205ENST00000587470 NUPR1O60356 82 aa2.3□□□□□ -2.04
VMP1-205ENST00000587470 G0S2P27469 103 aa2.3□□□□□ -2.04
VMP1-205ENST00000587470 PMCHL1Q16048 86 aa2.3□□□□□ -2.04
VMP1-205ENST00000587470 FA2HQ7L5A8 372 aa2.3□□□□□ -2.04
VMP1-205ENST00000587470 LINC00526Q96FQ7 95 aa2.3□□□□□ -2.04
VMP1-205ENST00000587470 TMEM141Q96I45 108 aa2.3□□□□□ -2.04
VMP1-205ENST00000587470 SCGB3A1Q96QR1 104 aa2.3□□□□□ -2.04
VMP1-205ENST00000587470 CST9LQ9H4G1 147 aa2.3□□□□□ -2.04
VMP1-205ENST00000587470 VPS13BQ7Z7G8 4022 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 LRP2P98164 4655 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 IGHV3-64A0A075B6Q5 118 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 LINC01549A6NIU2 74 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 NDUFC2-KCTD14E9PQ53 114 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 M0QXV9 152 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 COX7A2LO14548 114 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 BPY2O14599 106 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 NDUFS5O43920 106 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 HAMPP81172 84 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 CD164Q04900 197 aa2.29□□□□□ -2.04
VMP1-205ENST00000587470 CIRBPQ14011 172 aaKnown RBP2.29□□□□□ -2.04
VMP1-205ENST00000587470 CHCHD1Q96BP2 118 aaKnown RBP2.29□□□□□ -2.04
VMP1-205ENST00000587470 IGLV4-69A0A075B6H9 119 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 TINCRA0A1B0GVN0 87 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST1H2BKO60814 126 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HBDP02042 147 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST1H2BJP06899 126 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 S100A1P23297 94 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST1H2BOP23527 126 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST1H2BBP33778 126 aa2.28□□□□□ -2.04
VMP1-205ENST00000587470 HIST1H2BDP58876 126 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms