RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 PFN2P35080 140 aa8.27□□□□□ -1.09
HDAC5-203ENST00000586339 LINC00310P59036 64 aa8.27□□□□□ -1.09
HDAC5-203ENST00000586339 COX17Q14061 63 aa8.27□□□□□ -1.09
HDAC5-203ENST00000586339 FAM229BQ4G0N7 80 aa8.27□□□□□ -1.09
HDAC5-203ENST00000586339 SFTA2Q6UW10 78 aa8.27□□□□□ -1.09
HDAC5-203ENST00000586339 TSPAN13O95857 204 aa8.26□□□□□ -1.09
HDAC5-203ENST00000586339 ZNF625Q96I27 306 aaPredicted RBP8.26□□□□□ -1.09
HDAC5-203ENST00000586339 ERG28Q9UKR5 140 aa8.26□□□□□ -1.09
HDAC5-203ENST00000586339 IGKV2-28A0A075B6P5 120 aa8.25□□□□□ -1.09
HDAC5-203ENST00000586339 TRAV12-1A0A0B4J245 112 aa8.25□□□□□ -1.09
HDAC5-203ENST00000586339 HSBP1O75506 76 aa8.25□□□□□ -1.09
HDAC5-203ENST00000586339 IGKV2D-28P01615 120 aa8.25□□□□□ -1.09
HDAC5-203ENST00000586339 VPREB1P12018 145 aa8.25□□□□□ -1.09
HDAC5-203ENST00000586339 TMEM223A0PJW6 202 aa8.24□□□□□ -1.09
HDAC5-203ENST00000586339 COLCA2A8K830 154 aa8.24□□□□□ -1.09
HDAC5-203ENST00000586339 SCO1O75880 301 aa8.24□□□□□ -1.09
HDAC5-203ENST00000586339 RPL24P83731 157 aaKnown RBP8.24□□□□□ -1.09
HDAC5-203ENST00000586339 SND1-IT1Q9HBX3 110 aa8.24□□□□□ -1.09
HDAC5-203ENST00000586339 SERF1AO75920 110 aa8.23□□□□□ -1.09
HDAC5-203ENST00000586339 KRTAP13-2Q52LG2 175 aa8.23□□□□□ -1.09
HDAC5-203ENST00000586339 A0A0U1RQV1 116 aa8.22□□□□□ -1.09
HDAC5-203ENST00000586339 Q8NDZ9 215 aa8.22□□□□□ -1.09
HDAC5-203ENST00000586339 TMEM126AQ9H061 195 aa8.22□□□□□ -1.09
HDAC5-203ENST00000586339 ANAPC11Q9NYG5 84 aa8.22□□□□□ -1.09
HDAC5-203ENST00000586339 PRLHP81277 87 aa8.21□□□□□ -1.1
HDAC5-203ENST00000586339 LINC00304Q8N9R0 145 aa8.21□□□□□ -1.1
HDAC5-203ENST00000586339 H0Y8G0 127 aa8.2□□□□□ -1.1
HDAC5-203ENST00000586339 FAM19A1Q7Z5A9 133 aa8.2□□□□□ -1.1
HDAC5-203ENST00000586339 IGKV2D-26A0A0A0MRZ7 120 aa8.19□□□□□ -1.1
HDAC5-203ENST00000586339 TMEM238C9JI98 176 aa8.19□□□□□ -1.1
HDAC5-203ENST00000586339 M0R378 163 aa8.19□□□□□ -1.1
HDAC5-203ENST00000586339 LEPROTL1O95214 131 aa8.19□□□□□ -1.1
HDAC5-203ENST00000586339 A0A0U1RRA0 63 aa8.18□□□□□ -1.1
HDAC5-203ENST00000586339 PCP4L1A6NKN8 68 aa8.18□□□□□ -1.1
HDAC5-203ENST00000586339 S100A6P06703 90 aa8.17□□□□□ -1.1
HDAC5-203ENST00000586339 FABP4P15090 132 aa8.17□□□□□ -1.1
HDAC5-203ENST00000586339 LINC00158P58513 81 aa8.17□□□□□ -1.1
HDAC5-203ENST00000586339 PLEKHB2Q96CS7 222 aa8.16□□□□□ -1.1
HDAC5-203ENST00000586339 SMIM13P0DJ93 91 aa8.15□□□□□ -1.1
HDAC5-203ENST00000586339 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.1
HDAC5-203ENST00000586339 TPRXLQ17RH7 258 aa8.14□□□□□ -1.11
HDAC5-203ENST00000586339 PMCHL2Q9BQD1 86 aa8.14□□□□□ -1.11
HDAC5-203ENST00000586339 HSPB8Q9UJY1 196 aa8.14□□□□□ -1.11
HDAC5-203ENST00000586339 MEIG1Q5JSS6 88 aa8.13□□□□□ -1.11
HDAC5-203ENST00000586339 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
HDAC5-203ENST00000586339 HIGD2AQ9BW72 106 aa8.13□□□□□ -1.11
HDAC5-203ENST00000586339 NDUFA12Q9UI09 145 aa8.13□□□□□ -1.11
HDAC5-203ENST00000586339 C12orf57Q99622 126 aa8.12□□□□□ -1.11
HDAC5-203ENST00000586339 ZNF706Q9Y5V0 76 aaPredicted RBP8.12□□□□□ -1.11
HDAC5-203ENST00000586339 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 PRYO14603 147 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 LEPROTO15243 131 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST1H2BKO60814 126 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 DPM2O94777 84 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST1H2BJP06899 126 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST1H2BOP23527 126 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 PLNP26678 52 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST1H2BBP33778 126 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST1H2BDP58876 126 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST1H2BCP62807 126 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HERV-K104P63124 156 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST2H2BEQ16778 126 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.11□□□□□ -1.11
HDAC5-203ENST00000586339 SPAG11AQ6PDA7 123 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 MIR7-3HGQ8N6C7 128 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST1H2BHQ93079 126 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST1H2BNQ99877 126 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 HIST1H2BMQ99879 126 aa8.11□□□□□ -1.11
HDAC5-203ENST00000586339 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
HDAC5-203ENST00000586339 LINC00587B1AMM8 73 aa8.1□□□□□ -1.11
HDAC5-203ENST00000586339 IGKCP01834 107 aa8.1□□□□□ -1.11
HDAC5-203ENST00000586339 C3orf22Q8N5N4 141 aa8.1□□□□□ -1.11
HDAC5-203ENST00000586339 SPRR4Q96PI1 79 aa8.1□□□□□ -1.11
HDAC5-203ENST00000586339 MYMXA0A1B0GTQ4 84 aa8.09□□□□□ -1.11
HDAC5-203ENST00000586339 LINC00337Q8N6G1 96 aa8.09□□□□□ -1.11
HDAC5-203ENST00000586339 CDIP1Q9H305 208 aa8.09□□□□□ -1.11
HDAC5-203ENST00000586339 FAT4Q6V0I7 4981 aa8.08□□□□□ -1.12
HDAC5-203ENST00000586339 J3QQQ9 107 aa8.08□□□□□ -1.12
HDAC5-203ENST00000586339 NCR3O14931 201 aa8.08□□□□□ -1.12
HDAC5-203ENST00000586339 SPRR1AP35321 89 aa8.08□□□□□ -1.12
HDAC5-203ENST00000586339 BOD1L2Q8IYS8 172 aa8.08□□□□□ -1.12
HDAC5-203ENST00000586339 DAND5Q8N907 189 aa8.08□□□□□ -1.12
HDAC5-203ENST00000586339 MAP1LC3CQ9BXW4 147 aa8.08□□□□□ -1.12
HDAC5-203ENST00000586339 KCNQ1DNQ9H478 68 aa8.07□□□□□ -1.12
HDAC5-203ENST00000586339 AKR1D1P51857 326 aa8.06□□□□□ -1.12
HDAC5-203ENST00000586339 HERVK_113P61574 105 aa8.06□□□□□ -1.12
HDAC5-203ENST00000586339 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
HDAC5-203ENST00000586339 SYS1-DBNDD2H3BUS1 97 aa8.05□□□□□ -1.12
HDAC5-203ENST00000586339 SMIM6P0DI80 62 aa8.05□□□□□ -1.12
HDAC5-203ENST00000586339 ETDCA0A1B0GVM5 59 aa8.04□□□□□ -1.12
HDAC5-203ENST00000586339 KRTAP4-16G5E9R7 235 aaPredicted RBP8.04□□□□□ -1.12
HDAC5-203ENST00000586339 LGALS3P17931 250 aaKnown RBP8.04□□□□□ -1.12
HDAC5-203ENST00000586339 C4orf48Q5BLP8 95 aa8.04□□□□□ -1.12
HDAC5-203ENST00000586339 PPDPFQ9H3Y8 114 aa8.04□□□□□ -1.12
HDAC5-203ENST00000586339 NMUP48645 174 aa8.03□□□□□ -1.12
HDAC5-203ENST00000586339 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.13
HDAC5-203ENST00000586339 TRBV10-3A0A0K0K1G6 114 aa8.02□□□□□ -1.13
HDAC5-203ENST00000586339 E9PLD3 99 aa8.02□□□□□ -1.13
HDAC5-203ENST00000586339 LINC00483Q53H64 154 aa8.02□□□□□ -1.13
HDAC5-203ENST00000586339 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms