RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 S100A7L2Q5SY68 101 aa4.1□□□□□ -1.75
LIG3-206ENST00000586058 ADAMTSL4-AS1Q5T5F5 129 aa4.1□□□□□ -1.75
LIG3-206ENST00000586058 C1orf134Q5TEV5 83 aa4.1□□□□□ -1.75
LIG3-206ENST00000586058 KRTAP26-1Q6PEX3 210 aa4.1□□□□□ -1.75
LIG3-206ENST00000586058 Q6ZRU5 148 aa4.1□□□□□ -1.75
LIG3-206ENST00000586058 GTF2H5Q6ZYL4 71 aa4.1□□□□□ -1.75
LIG3-206ENST00000586058 OR13C6PQ8NH95 151 aa4.1□□□□□ -1.75
LIG3-206ENST00000586058 LINC00526Q96FQ7 95 aa4.1□□□□□ -1.75
LIG3-206ENST00000586058 COL7A1Q02388 2944 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 LOC107984156A0A0G2JMH3 177 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 GAGE10A6NGK3 116 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 H7C2G1 150 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 TAX1BP3O14907 124 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 LECT2O14960 151 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 SNCGO76070 127 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 NDUFC2O95298 119 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 CFC1BP0CG36 223 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 CFC1P0CG37 223 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 SCGB1C2P0DMR2 95 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 ARL17AQ8IVW1 177 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 NKAPP1Q8N9T2 125 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 KRTAP1-5Q9BYS1 174 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 C6orf48Q9UBA6 75 aa4.09□□□□□ -1.75
LIG3-206ENST00000586058 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.08□□□□□ -1.76
LIG3-206ENST00000586058 A0A1B0GV90 55 aa4.08□□□□□ -1.76
LIG3-206ENST00000586058 A0A1W2PPM0 123 aa4.08□□□□□ -1.76
LIG3-206ENST00000586058 C9orf116Q5BN46 136 aaPredicted RBP4.08□□□□□ -1.76
LIG3-206ENST00000586058 TRBV20-1A0A075B6N2 111 aa4.07□□□□□ -1.76
LIG3-206ENST00000586058 NCR3O14931 201 aa4.07□□□□□ -1.76
LIG3-206ENST00000586058 TSPAN13O95857 204 aa4.07□□□□□ -1.76
LIG3-206ENST00000586058 TLX1NBP0CAT3 122 aa4.07□□□□□ -1.76
LIG3-206ENST00000586058 CNBPP62633 177 aaKnown RBP4.07□□□□□ -1.76
LIG3-206ENST00000586058 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
LIG3-206ENST00000586058 GAGE2EQ4V326 116 aa4.07□□□□□ -1.76
LIG3-206ENST00000586058 C10orf25Q5T742 122 aa4.07□□□□□ -1.76
LIG3-206ENST00000586058 TMEM126AQ9H061 195 aa4.07□□□□□ -1.76
LIG3-206ENST00000586058 GAGE2DQ9UEU5 116 aa4.07□□□□□ -1.76
LIG3-206ENST00000586058 SPCS1Q9Y6A9 102 aa4.07□□□□□ -1.76
LIG3-206ENST00000586058 HUWE1Q7Z6Z7 4374 aaKnown RBP4.07□□□□□ -1.76
LIG3-206ENST00000586058 TRBV10-2A0A0K0K1G8 114 aa4.06□□□□□ -1.76
LIG3-206ENST00000586058 GAGE2BQ13066 116 aa4.06□□□□□ -1.76
LIG3-206ENST00000586058 SOSTDC1Q6X4U4 206 aa4.06□□□□□ -1.76
LIG3-206ENST00000586058 CDIP1Q9H305 208 aa4.06□□□□□ -1.76
LIG3-206ENST00000586058 XAGE1AQ9HD64 81 aa4.06□□□□□ -1.76
LIG3-206ENST00000586058 LINC00474Q9P2X8 69 aa4.06□□□□□ -1.76
LIG3-206ENST00000586058 DNAL4O96015 105 aa4.05□□□□□ -1.76
LIG3-206ENST00000586058 ATXN8Q156A1 80 aa4.05□□□□□ -1.76
LIG3-206ENST00000586058 Q6ZR54 194 aa4.05□□□□□ -1.76
LIG3-206ENST00000586058 Q8N814 137 aa4.05□□□□□ -1.76
LIG3-206ENST00000586058 NAA38Q9BRA0 125 aaKnown RBP4.05□□□□□ -1.76
LIG3-206ENST00000586058 STAB2Q8WWQ8 2551 aa4.04□□□□□ -1.76
LIG3-206ENST00000586058 A0A087WTM6 91 aa4.04□□□□□ -1.76
LIG3-206ENST00000586058 K7EP34 96 aa4.04□□□□□ -1.76
LIG3-206ENST00000586058 M0R378 163 aa4.04□□□□□ -1.76
LIG3-206ENST00000586058 Q6ZRP5 223 aa4.04□□□□□ -1.76
LIG3-206ENST00000586058 MEGF8Q7Z7M0 2845 aa4.04□□□□□ -1.76
LIG3-206ENST00000586058 TRAV23DV6A0A075B6W5 121 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 IGLV5-52A0A0A0MRZ9 124 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 IGKV2-24A0A0C4DH68 120 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 LRCOL1A6NCL2 159 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 C16orf90A8MZG2 172 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 H0YGX0 51 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 TRIAP1O43715 76 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 SLC25A20O43772 301 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 RPL28P46779 137 aaKnown RBP4.03□□□□□ -1.76
LIG3-206ENST00000586058 Q6ZRN7 208 aaPredicted RBP4.03□□□□□ -1.76
LIG3-206ENST00000586058 LINC00337Q8N6G1 96 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 DIRC1Q969H9 104 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 DPH3Q96FX2 82 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 KRTAP4-5Q9BYR2 181 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 PLA2G2DQ9UNK4 145 aa4.03□□□□□ -1.76
LIG3-206ENST00000586058 IGKV2-28A0A075B6P5 120 aa4.02□□□□□ -1.77
LIG3-206ENST00000586058 RTL8CO15255 209 aa4.02□□□□□ -1.77
LIG3-206ENST00000586058 IGKV2D-28P01615 120 aa4.02□□□□□ -1.77
LIG3-206ENST00000586058 SEC61GP60059 68 aa4.02□□□□□ -1.77
LIG3-206ENST00000586058 UBE2V1Q13404 147 aa4.02□□□□□ -1.77
LIG3-206ENST00000586058 WFDC2Q14508 124 aa4.02□□□□□ -1.77
LIG3-206ENST00000586058 FAM19A5Q7Z5A7 132 aaPredicted RBP4.02□□□□□ -1.77
LIG3-206ENST00000586058 C9orf163Q8N9P6 203 aa4.02□□□□□ -1.77
LIG3-206ENST00000586058 DNAH9Q9NYC9 4486 aa4.01□□□□□ -1.77
LIG3-206ENST00000586058 A0A096LNI7 61 aa4.01□□□□□ -1.77
LIG3-206ENST00000586058 LCE6AA0A183 80 aa4.01□□□□□ -1.77
LIG3-206ENST00000586058 M0QXV9 152 aa4.01□□□□□ -1.77
LIG3-206ENST00000586058 VPREB1P12018 145 aa4.01□□□□□ -1.77
LIG3-206ENST00000586058 UBE2BP63146 152 aa4.01□□□□□ -1.77
LIG3-206ENST00000586058 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
LIG3-206ENST00000586058 SMIM11BQ8TCY0 68 aa4.01□□□□□ -1.77
LIG3-206ENST00000586058 IGLV5-37A0A075B6J1 123 aa4□□□□□ -1.77
LIG3-206ENST00000586058 TRBV10-3A0A0K0K1G6 114 aa4□□□□□ -1.77
LIG3-206ENST00000586058 F8W1H4 67 aa4□□□□□ -1.77
LIG3-206ENST00000586058 H3BMG7 143 aa4□□□□□ -1.77
LIG3-206ENST00000586058 PRYO14603 147 aa4□□□□□ -1.77
LIG3-206ENST00000586058 TCL1BO95988 128 aa4□□□□□ -1.77
LIG3-206ENST00000586058 C5orf47Q569G3 176 aa4□□□□□ -1.77
LIG3-206ENST00000586058 C9orf129Q5T035 196 aaKnown RBP4□□□□□ -1.77
LIG3-206ENST00000586058 LINC00336Q6ZUF6 198 aa4□□□□□ -1.77
LIG3-206ENST00000586058 MRPL55Q7Z7F7 128 aaKnown RBP4□□□□□ -1.77
LIG3-206ENST00000586058 PRKDCP78527 4128 aaKnown RBP3.99□□□□□ -1.77
LIG3-206ENST00000586058 ETDCA0A1B0GVM5 59 aa3.99□□□□□ -1.77
LIG3-206ENST00000586058 A0A1B0GX51 115 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms