RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 LINC01547P58512 204 aaPredicted RBP8.38□□□□□ -1.07
CDK5RAP3-226ENST00000583182 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
CDK5RAP3-226ENST00000583182 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
CDK5RAP3-226ENST00000583182 FP248Q71RG6 208 aaPredicted RBP8.38□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST1H2BKO60814 126 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 ATP5LO75964 103 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 S100A6P06703 90 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST1H2BJP06899 126 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST1H2BOP23527 126 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST1H2BBP33778 126 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST1H2BDP58876 126 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST1H2BCP62807 126 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST2H2BEQ16778 126 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 Q8NDZ9 215 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST1H2BHQ93079 126 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST1H2BNQ99877 126 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIST1H2BMQ99879 126 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 GNB1LQ9BYB4 327 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 CST9LQ9H4G1 147 aa8.37□□□□□ -1.07
CDK5RAP3-226ENST00000583182 KIAA1644Q3SXP7 199 aa8.36□□□□□ -1.07
CDK5RAP3-226ENST00000583182 LINC00337Q8N6G1 96 aa8.36□□□□□ -1.07
CDK5RAP3-226ENST00000583182 SND1-IT1Q9HBX3 110 aa8.36□□□□□ -1.07
CDK5RAP3-226ENST00000583182 TRAPPC1Q9Y5R8 145 aa8.36□□□□□ -1.07
CDK5RAP3-226ENST00000583182 SNRPEP62304 92 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-226ENST00000583182 HIGD2AQ9BW72 106 aa8.35□□□□□ -1.07
CDK5RAP3-226ENST00000583182 CRCT1Q9UGL9 99 aa8.35□□□□□ -1.07
CDK5RAP3-226ENST00000583182 FABP9Q0Z7S8 132 aa8.34□□□□□ -1.07
CDK5RAP3-226ENST00000583182 COA6Q5JTJ3 125 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP3-226ENST00000583182 SPRR4Q96PI1 79 aa8.34□□□□□ -1.07
CDK5RAP3-226ENST00000583182 NDUFA6P56556 154 aa8.33□□□□□ -1.08
CDK5RAP3-226ENST00000583182 MRPL18Q9H0U6 180 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-226ENST00000583182 IGLV5-39A0A0G2JS06 123 aa8.32□□□□□ -1.08
CDK5RAP3-226ENST00000583182 RPL24P83731 157 aaKnown RBP8.32□□□□□ -1.08
CDK5RAP3-226ENST00000583182 PMVKQ15126 192 aa8.32□□□□□ -1.08
CDK5RAP3-226ENST00000583182 DAND5Q8N907 189 aa8.32□□□□□ -1.08
CDK5RAP3-226ENST00000583182 ERG28Q9UKR5 140 aa8.32□□□□□ -1.08
CDK5RAP3-226ENST00000583182 LINC01546A6NGU7 62 aa8.31□□□□□ -1.08
CDK5RAP3-226ENST00000583182 H3BRM9 83 aa8.31□□□□□ -1.08
CDK5RAP3-226ENST00000583182 C4orf48Q5BLP8 95 aa8.31□□□□□ -1.08
CDK5RAP3-226ENST00000583182 Q8NBF4 154 aa8.3□□□□□ -1.08
CDK5RAP3-226ENST00000583182 ZNF625Q96I27 306 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-226ENST00000583182 LINC01549A6NIU2 74 aa8.29□□□□□ -1.08
CDK5RAP3-226ENST00000583182 SEC61BP60468 96 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-226ENST00000583182 COX17Q14061 63 aa8.29□□□□□ -1.08
CDK5RAP3-226ENST00000583182 IGLC3P0DOY3 106 aa8.28□□□□□ -1.08
CDK5RAP3-226ENST00000583182 HIST3H2BBQ8N257 126 aa8.28□□□□□ -1.08
CDK5RAP3-226ENST00000583182 ZNF22P17026 224 aaPredicted RBP8.27□□□□□ -1.09
CDK5RAP3-226ENST00000583182 SPINK1P00995 79 aa8.26□□□□□ -1.09
CDK5RAP3-226ENST00000583182 ZNF706Q9Y5V0 76 aaPredicted RBP8.26□□□□□ -1.09
CDK5RAP3-226ENST00000583182 AKR1D1P51857 326 aa8.25□□□□□ -1.09
CDK5RAP3-226ENST00000583182 LCE2CQ5TA81 110 aa8.24□□□□□ -1.09
CDK5RAP3-226ENST00000583182 S100A2P29034 98 aa8.23□□□□□ -1.09
CDK5RAP3-226ENST00000583182 LINC00518Q8N0U6 118 aa8.23□□□□□ -1.09
CDK5RAP3-226ENST00000583182 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
CDK5RAP3-226ENST00000583182 HIST1H2BLQ99880 126 aa8.23□□□□□ -1.09
CDK5RAP3-226ENST00000583182 SMIM6P0DI80 62 aa8.22□□□□□ -1.09
CDK5RAP3-226ENST00000583182 LINC00310P59036 64 aa8.22□□□□□ -1.09
CDK5RAP3-226ENST00000583182 FA2HQ7L5A8 372 aa8.22□□□□□ -1.09
CDK5RAP3-226ENST00000583182 A0A096LNJ9 63 aa8.21□□□□□ -1.1
CDK5RAP3-226ENST00000583182 SPRR1AP35321 89 aa8.21□□□□□ -1.1
CDK5RAP3-226ENST00000583182 BAGE3Q86Y29 109 aa8.21□□□□□ -1.1
CDK5RAP3-226ENST00000583182 C18orf32Q8TCD1 76 aa8.21□□□□□ -1.1
CDK5RAP3-226ENST00000583182 A0A0U1RRA0 63 aa8.2□□□□□ -1.1
CDK5RAP3-226ENST00000583182 C11orf86A6NJI1 115 aa8.2□□□□□ -1.1
CDK5RAP3-226ENST00000583182 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
CDK5RAP3-226ENST00000583182 PRYO14603 147 aa8.2□□□□□ -1.1
CDK5RAP3-226ENST00000583182 SERF1AO75920 110 aa8.2□□□□□ -1.1
CDK5RAP3-226ENST00000583182 LINC00158P58513 81 aa8.2□□□□□ -1.1
CDK5RAP3-226ENST00000583182 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
CDK5RAP3-226ENST00000583182 XP32Q5T750 250 aa8.2□□□□□ -1.1
CDK5RAP3-226ENST00000583182 Q8N377 158 aa8.2□□□□□ -1.1
CDK5RAP3-226ENST00000583182 FABP4P15090 132 aa8.19□□□□□ -1.1
CDK5RAP3-226ENST00000583182 KRTAP19-2Q3LHN2 52 aa8.19□□□□□ -1.1
CDK5RAP3-226ENST00000583182 SFTA2Q6UW10 78 aa8.19□□□□□ -1.1
CDK5RAP3-226ENST00000583182 NDUFA12Q9UI09 145 aa8.19□□□□□ -1.1
CDK5RAP3-226ENST00000583182 TMEM170BQ5T4T1 132 aa8.18□□□□□ -1.1
CDK5RAP3-226ENST00000583182 KCNQ1DNQ9H478 68 aa8.18□□□□□ -1.1
CDK5RAP3-226ENST00000583182 NCR3O14931 201 aa8.17□□□□□ -1.1
CDK5RAP3-226ENST00000583182 RPS29P62273 56 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-226ENST00000583182 MOBPQ13875 183 aa8.17□□□□□ -1.1
CDK5RAP3-226ENST00000583182 GAGE2AQ6NT46 116 aa8.17□□□□□ -1.1
CDK5RAP3-226ENST00000583182 URB1-AS1Q96HZ7 61 aa8.17□□□□□ -1.1
CDK5RAP3-226ENST00000583182 C12orf57Q99622 126 aa8.17□□□□□ -1.1
CDK5RAP3-226ENST00000583182 IGLV9-49A0A0B4J1Y8 123 aa8.16□□□□□ -1.1
CDK5RAP3-226ENST00000583182 ETDCA0A1B0GVM5 59 aa8.16□□□□□ -1.1
CDK5RAP3-226ENST00000583182 FAM19A2Q8N3H0 131 aa8.16□□□□□ -1.1
CDK5RAP3-226ENST00000583182 CHCHD1Q96BP2 118 aaKnown RBP8.16□□□□□ -1.1
CDK5RAP3-226ENST00000583182 MT1HP80294 61 aa8.15□□□□□ -1.1
CDK5RAP3-226ENST00000583182 PYY3Q5JQD4 70 aa8.15□□□□□ -1.1
CDK5RAP3-226ENST00000583182 BOD1L2Q8IYS8 172 aa8.15□□□□□ -1.1
CDK5RAP3-226ENST00000583182 SLC25A20O43772 301 aa8.14□□□□□ -1.11
CDK5RAP3-226ENST00000583182 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
CDK5RAP3-226ENST00000583182 SMIM13P0DJ93 91 aa8.14□□□□□ -1.11
CDK5RAP3-226ENST00000583182 JOSD1Q15040 202 aaPredicted RBP8.14□□□□□ -1.11
CDK5RAP3-226ENST00000583182 PMCHL1Q16048 86 aa8.14□□□□□ -1.11
CDK5RAP3-226ENST00000583182 SSBP3-AS1Q7Z2R9 100 aa8.14□□□□□ -1.11
CDK5RAP3-226ENST00000583182 TRBV10-3A0A0K0K1G6 114 aa8.13□□□□□ -1.11
CDK5RAP3-226ENST00000583182 HSBP1O75506 76 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms