RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 SMIM13P0DJ93 91 aa10.13□□□□□ -0.79
RNF43-206ENST00000582293 HERV-K104P63124 156 aa10.13□□□□□ -0.79
RNF43-206ENST00000582293 PSORS1C2Q9UIG4 136 aa10.13□□□□□ -0.79
RNF43-206ENST00000582293 MYMXA0A1B0GTQ4 84 aa10.12□□□□□ -0.79
RNF43-206ENST00000582293 IGLV5-37A0A075B6J1 123 aa10.11□□□□□ -0.79
RNF43-206ENST00000582293 S100A2P29034 98 aa10.11□□□□□ -0.79
RNF43-206ENST00000582293 LINC00158P58513 81 aa10.11□□□□□ -0.79
RNF43-206ENST00000582293 FLG2Q5D862 2391 aaPredicted RBP10.1□□□□□ -0.79
RNF43-206ENST00000582293 VPREB1P12018 145 aa10.1□□□□□ -0.79
RNF43-206ENST00000582293 LGALS3P17931 250 aaKnown RBP10.1□□□□□ -0.79
RNF43-206ENST00000582293 ATOH7Q8N100 152 aa10.1□□□□□ -0.79
RNF43-206ENST00000582293 TP73-AS1Q9UF72 201 aa10.1□□□□□ -0.79
RNF43-206ENST00000582293 NMUP48645 174 aa10.09□□□□□ -0.79
RNF43-206ENST00000582293 MEIG1Q5JSS6 88 aa10.09□□□□□ -0.79
RNF43-206ENST00000582293 MIR7-3HGQ8N6C7 128 aa10.09□□□□□ -0.79
RNF43-206ENST00000582293 TTTY13Q9BZ97 58 aa10.09□□□□□ -0.79
RNF43-206ENST00000582293 C20orf202A1L168 122 aa10.08□□□□□ -0.8
RNF43-206ENST00000582293 SRSF9Q13242 221 aaKnown RBP eCLIP10.08□□□□□ -0.8
RNF43-206ENST00000582293 ANKRD39Q53RE8 183 aa10.08□□□□□ -0.8
RNF43-206ENST00000582293 MRPL55Q7Z7F7 128 aaKnown RBP10.08□□□□□ -0.8
RNF43-206ENST00000582293 LINC00167Q96N53 147 aa10.07□□□□□ -0.8
RNF43-206ENST00000582293 A0A0J9YXY3 114 aa10.06□□□□□ -0.8
RNF43-206ENST00000582293 UBE2BP63146 152 aa10.06□□□□□ -0.8
RNF43-206ENST00000582293 DAND5Q8N907 189 aa10.06□□□□□ -0.8
RNF43-206ENST00000582293 C1orf137Q5JT78 98 aa10.05□□□□□ -0.8
RNF43-206ENST00000582293 GAGE10A6NGK3 116 aa10.04□□□□□ -0.8
RNF43-206ENST00000582293 LINC00587B1AMM8 73 aa10.04□□□□□ -0.8
RNF43-206ENST00000582293 LBHQ53QV2 105 aaPredicted RBP10.04□□□□□ -0.8
RNF43-206ENST00000582293 ADAMTSL4-AS1Q5T5F5 129 aa10.04□□□□□ -0.8
RNF43-206ENST00000582293 LITAFQ99732 161 aa10.04□□□□□ -0.8
RNF43-206ENST00000582293 RPL37AP8A6NKH3 93 aa10.03□□□□□ -0.8
RNF43-206ENST00000582293 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
RNF43-206ENST00000582293 LOC107984156A0A0G2JMH3 177 aa10.02□□□□□ -0.81
RNF43-206ENST00000582293 IGLV7-43P04211 117 aa10.02□□□□□ -0.81
RNF43-206ENST00000582293 ARL17AQ8IVW1 177 aa10.02□□□□□ -0.81
RNF43-206ENST00000582293 NKAPP1Q8N9T2 125 aa10.02□□□□□ -0.81
RNF43-206ENST00000582293 ZNF815PA8K554 130 aa10.01□□□□□ -0.81
RNF43-206ENST00000582293 KRTAP29-1A8MX34 341 aaPredicted RBP10.01□□□□□ -0.81
RNF43-206ENST00000582293 RPL24P83731 157 aaKnown RBP10.01□□□□□ -0.81
RNF43-206ENST00000582293 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
RNF43-206ENST00000582293 SPINK6Q6UWN8 80 aa10□□□□□ -0.81
RNF43-206ENST00000582293 BOD1L2Q8IYS8 172 aa10□□□□□ -0.81
RNF43-206ENST00000582293 IGLV1-50A0A075B6I6 118 aa9.99□□□□□ -0.81
RNF43-206ENST00000582293 AKR1D1P51857 326 aa9.99□□□□□ -0.81
RNF43-206ENST00000582293 PCP2Q8IVA1 136 aa9.99□□□□□ -0.81
RNF43-206ENST00000582293 IGKV2-28A0A075B6P5 120 aa9.98□□□□□ -0.81
RNF43-206ENST00000582293 IGKV2D-28P01615 120 aa9.98□□□□□ -0.81
RNF43-206ENST00000582293 TIMM17BO60830 172 aa9.97□□□□□ -0.81
RNF43-206ENST00000582293 M0R378 163 aa9.96□□□□□ -0.82
RNF43-206ENST00000582293 NCR3O14931 201 aa9.96□□□□□ -0.82
RNF43-206ENST00000582293 TMEM238C9JI98 176 aa9.95□□□□□ -0.82
RNF43-206ENST00000582293 BCE1O60756 84 aa9.95□□□□□ -0.82
RNF43-206ENST00000582293 SCGB1D1O95968 90 aa9.95□□□□□ -0.82
RNF43-206ENST00000582293 OXTP01178 125 aa9.95□□□□□ -0.82
RNF43-206ENST00000582293 NPC2P61916 151 aa9.95□□□□□ -0.82
RNF43-206ENST00000582293 HERC1Q15751 4861 aa9.95□□□□□ -0.82
RNF43-206ENST00000582293 MT1HL1P0DM35 61 aa9.94□□□□□ -0.82
RNF43-206ENST00000582293 KRTAP13-1Q8IUC0 172 aa9.94□□□□□ -0.82
RNF43-206ENST00000582293 TMA7Q9Y2S6 64 aaKnown RBP9.94□□□□□ -0.82
RNF43-206ENST00000582293 LINC00308Q8TCZ7 52 aa9.93□□□□□ -0.82
RNF43-206ENST00000582293 ZNF861PO60384 105 aa9.92□□□□□ -0.82
RNF43-206ENST00000582293 NDUFC2O95298 119 aa9.92□□□□□ -0.82
RNF43-206ENST00000582293 TMEM126AQ9H061 195 aa9.92□□□□□ -0.82
RNF43-206ENST00000582293 TNXBP22105 4242 aa9.92□□□□□ -0.82
RNF43-206ENST00000582293 H0Y9J4 135 aa9.91□□□□□ -0.82
RNF43-206ENST00000582293 TRBV10-3A0A0K0K1G6 114 aa9.9□□□□□ -0.82
RNF43-206ENST00000582293 REG3GQ6UW15 175 aa9.9□□□□□ -0.82
RNF43-206ENST00000582293 LINC01600Q96MT4 127 aa9.9□□□□□ -0.82
RNF43-206ENST00000582293 MIEN1Q9BRT3 115 aa9.9□□□□□ -0.82
RNF43-206ENST00000582293 SPANXDQ9BXN6 97 aa9.9□□□□□ -0.82
RNF43-206ENST00000582293 SPANXCQ9NY87 97 aa9.9□□□□□ -0.82
RNF43-206ENST00000582293 TRBV10-2A0A0K0K1G8 114 aa9.89□□□□□ -0.83
RNF43-206ENST00000582293 KRTAP1-4P0C5Y4 121 aa9.89□□□□□ -0.83
RNF43-206ENST00000582293 JOSD1Q15040 202 aaPredicted RBP9.89□□□□□ -0.83
RNF43-206ENST00000582293 SCGB1D4Q6XE38 83 aa9.89□□□□□ -0.83
RNF43-206ENST00000582293 DIRC1Q969H9 104 aa9.89□□□□□ -0.83
RNF43-206ENST00000582293 SPANXB1Q9NS25 103 aaPredicted RBP9.89□□□□□ -0.83
RNF43-206ENST00000582293 HSBP1L1C9JCN9 74 aa9.88□□□□□ -0.83
RNF43-206ENST00000582293 J3QL48 77 aa9.88□□□□□ -0.83
RNF43-206ENST00000582293 SPRR1AP35321 89 aa9.88□□□□□ -0.83
RNF43-206ENST00000582293 KCNQ1DNQ9H478 68 aa9.88□□□□□ -0.83
RNF43-206ENST00000582293 KRTAP4-16G5E9R7 235 aaPredicted RBP9.87□□□□□ -0.83
RNF43-206ENST00000582293 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
RNF43-206ENST00000582293 PRYO14603 147 aa9.86□□□□□ -0.83
RNF43-206ENST00000582293 IGLV6-57P01721 117 aa9.86□□□□□ -0.83
RNF43-206ENST00000582293 RPL28P46779 137 aaKnown RBP9.86□□□□□ -0.83
RNF43-206ENST00000582293 PRLHP81277 87 aa9.86□□□□□ -0.83
RNF43-206ENST00000582293 DDTP30046 118 aa9.85□□□□□ -0.83
RNF43-206ENST00000582293 KRTAP10-8P60410 259 aa9.85□□□□□ -0.83
RNF43-206ENST00000582293 PYY3Q5JQD4 70 aa9.85□□□□□ -0.83
RNF43-206ENST00000582293 FAM19A1Q7Z5A9 133 aa9.85□□□□□ -0.83
RNF43-206ENST00000582293 UBE2AP49459 152 aa9.84□□□□□ -0.83
RNF43-206ENST00000582293 COX8AP10176 69 aa9.83□□□□□ -0.84
RNF43-206ENST00000582293 MUSTN1Q8IVN3 82 aa9.83□□□□□ -0.84
RNF43-206ENST00000582293 PPDPFQ9H3Y8 114 aa9.83□□□□□ -0.84
RNF43-206ENST00000582293 Q6ZVH6 145 aa9.82□□□□□ -0.84
RNF43-206ENST00000582293 LINC00337Q8N6G1 96 aa9.82□□□□□ -0.84
RNF43-206ENST00000582293 PAM16Q9Y3D7 125 aa9.82□□□□□ -0.84
RNF43-206ENST00000582293 IFITM1P13164 125 aa9.81□□□□□ -0.84
RNF43-206ENST00000582293 DLEU1O43261 78 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms