RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 GAGE10A6NGK3 116 aa12.7□□□□□ -0.38
PPP4R1-221ENST00000582240 SMIM13P0DJ93 91 aa12.7□□□□□ -0.38
PPP4R1-221ENST00000582240 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
PPP4R1-221ENST00000582240 COX17Q14061 63 aa12.68□□□□□ -0.38
PPP4R1-221ENST00000582240 MEIG1Q5JSS6 88 aa12.68□□□□□ -0.38
PPP4R1-221ENST00000582240 SFTA2Q6UW10 78 aa12.68□□□□□ -0.38
PPP4R1-221ENST00000582240 PLEKHB2Q96CS7 222 aa12.68□□□□□ -0.38
PPP4R1-221ENST00000582240 LINC00167Q96N53 147 aa12.68□□□□□ -0.38
PPP4R1-221ENST00000582240 PLA2G2DQ9UNK4 145 aa12.68□□□□□ -0.38
PPP4R1-221ENST00000582240 RPL37AP8A6NKH3 93 aa12.67□□□□□ -0.38
PPP4R1-221ENST00000582240 OXTP01178 125 aa12.67□□□□□ -0.38
PPP4R1-221ENST00000582240 HERVK_113P61574 105 aa12.67□□□□□ -0.38
PPP4R1-221ENST00000582240 LBHQ53QV2 105 aaPredicted RBP12.67□□□□□ -0.38
PPP4R1-221ENST00000582240 MRPL55Q7Z7F7 128 aaKnown RBP12.67□□□□□ -0.38
PPP4R1-221ENST00000582240 Q8NDZ9 215 aa12.67□□□□□ -0.38
PPP4R1-221ENST00000582240 J3QQQ9 107 aa12.66□□□□□ -0.38
PPP4R1-221ENST00000582240 IGLV7-43P04211 117 aa12.66□□□□□ -0.38
PPP4R1-221ENST00000582240 SPINK6Q6UWN8 80 aa12.66□□□□□ -0.38
PPP4R1-221ENST00000582240 MYMXA0A1B0GTQ4 84 aa12.65□□□□□ -0.38
PPP4R1-221ENST00000582240 TP73-AS1Q9UF72 201 aa12.65□□□□□ -0.38
PPP4R1-221ENST00000582240 IGLV5-37A0A075B6J1 123 aa12.64□□□□□ -0.39
PPP4R1-221ENST00000582240 NKAPP1Q8N9T2 125 aa12.64□□□□□ -0.39
PPP4R1-221ENST00000582240 VPREB1P12018 145 aa12.63□□□□□ -0.39
PPP4R1-221ENST00000582240 LGALS3P17931 250 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-221ENST00000582240 HERV-K104P63124 156 aa12.63□□□□□ -0.39
PPP4R1-221ENST00000582240 MIR7-3HGQ8N6C7 128 aa12.62□□□□□ -0.39
PPP4R1-221ENST00000582240 C20orf202A1L168 122 aa12.6□□□□□ -0.39
PPP4R1-221ENST00000582240 E9PLD3 99 aa12.6□□□□□ -0.39
PPP4R1-221ENST00000582240 DAND5Q8N907 189 aa12.6□□□□□ -0.39
PPP4R1-221ENST00000582240 DMBT1Q9UGM3 2413 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-221ENST00000582240 IGKV2-28A0A075B6P5 120 aa12.58□□□□□ -0.4
PPP4R1-221ENST00000582240 IGKV2D-28P01615 120 aa12.58□□□□□ -0.4
PPP4R1-221ENST00000582240 MT1HL1P0DM35 61 aa12.58□□□□□ -0.4
PPP4R1-221ENST00000582240 RPL24P83731 157 aaKnown RBP12.58□□□□□ -0.4
PPP4R1-221ENST00000582240 ATOH7Q8N100 152 aa12.57□□□□□ -0.4
PPP4R1-221ENST00000582240 HERC1Q15751 4861 aa12.56□□□□□ -0.4
PPP4R1-221ENST00000582240 IGKV2D-26A0A0A0MRZ7 120 aa12.56□□□□□ -0.4
PPP4R1-221ENST00000582240 NMUP48645 174 aa12.56□□□□□ -0.4
PPP4R1-221ENST00000582240 BOD1L2Q8IYS8 172 aa12.56□□□□□ -0.4
PPP4R1-221ENST00000582240 REG3GQ6UW15 175 aa12.55□□□□□ -0.4
PPP4R1-221ENST00000582240 TTTY13Q9BZ97 58 aa12.55□□□□□ -0.4
PPP4R1-221ENST00000582240 A0A0J9YXY3 114 aa12.54□□□□□ -0.4
PPP4R1-221ENST00000582240 LINC00587B1AMM8 73 aa12.54□□□□□ -0.4
PPP4R1-221ENST00000582240 LINC01600Q96MT4 127 aa12.54□□□□□ -0.4
PPP4R1-221ENST00000582240 AKR1D1P51857 326 aa12.53□□□□□ -0.4
PPP4R1-221ENST00000582240 DIRC1Q969H9 104 aa12.53□□□□□ -0.4
PPP4R1-221ENST00000582240 IGLV1-50A0A075B6I6 118 aa12.52□□□□□ -0.41
PPP4R1-221ENST00000582240 TMEM238C9JI98 176 aa12.52□□□□□ -0.41
PPP4R1-221ENST00000582240 NCR3O14931 201 aa12.52□□□□□ -0.41
PPP4R1-221ENST00000582240 BCE1O60756 84 aa12.52□□□□□ -0.41
PPP4R1-221ENST00000582240 H0Y9J4 135 aa12.51□□□□□ -0.41
PPP4R1-221ENST00000582240 ZNF861PO60384 105 aa12.51□□□□□ -0.41
PPP4R1-221ENST00000582240 NPC2P61916 151 aa12.51□□□□□ -0.41
PPP4R1-221ENST00000582240 ANKRD39Q53RE8 183 aa12.51□□□□□ -0.41
PPP4R1-221ENST00000582240 ADAMTSL4-AS1Q5T5F5 129 aa12.51□□□□□ -0.41
PPP4R1-221ENST00000582240 M0R378 163 aa12.49□□□□□ -0.41
PPP4R1-221ENST00000582240 SCGB1D1O95968 90 aa12.49□□□□□ -0.41
PPP4R1-221ENST00000582240 EIF4EBP3O60516 100 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-221ENST00000582240 JOSD1Q15040 202 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-221ENST00000582240 ZNF815PA8K554 130 aa12.47□□□□□ -0.41
PPP4R1-221ENST00000582240 SOSTDC1Q6X4U4 206 aa12.47□□□□□ -0.41
PPP4R1-221ENST00000582240 TNXBP22105 4242 aa12.46□□□□□ -0.41
PPP4R1-221ENST00000582240 UBE2AP49459 152 aa12.46□□□□□ -0.41
PPP4R1-221ENST00000582240 KRTAP10-8P60410 259 aa12.46□□□□□ -0.41
PPP4R1-221ENST00000582240 TMEM126AQ9H061 195 aa12.46□□□□□ -0.41
PPP4R1-221ENST00000582240 RPL28P46779 137 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-221ENST00000582240 PRLHP81277 87 aa12.44□□□□□ -0.42
PPP4R1-221ENST00000582240 PYY3Q5JQD4 70 aa12.44□□□□□ -0.42
PPP4R1-221ENST00000582240 FAM19A1Q7Z5A9 133 aa12.44□□□□□ -0.42
PPP4R1-221ENST00000582240 PRR26Q8N8Z3 221 aa12.44□□□□□ -0.42
PPP4R1-221ENST00000582240 LITAFQ99732 161 aa12.44□□□□□ -0.42
PPP4R1-221ENST00000582240 LOC107984156A0A0G2JMH3 177 aa12.43□□□□□ -0.42
PPP4R1-221ENST00000582240 KRTAP1-4P0C5Y4 121 aa12.43□□□□□ -0.42
PPP4R1-221ENST00000582240 ARL17AQ8IVW1 177 aa12.43□□□□□ -0.42
PPP4R1-221ENST00000582240 KRTAP13-1Q8IUC0 172 aa12.42□□□□□ -0.42
PPP4R1-221ENST00000582240 MIEN1Q9BRT3 115 aa12.42□□□□□ -0.42
PPP4R1-221ENST00000582240 TRBV10-3A0A0K0K1G6 114 aa12.41□□□□□ -0.42
PPP4R1-221ENST00000582240 PCP2Q8IVA1 136 aa12.41□□□□□ -0.42
PPP4R1-221ENST00000582240 TIMM17BO60830 172 aa12.38□□□□□ -0.43
PPP4R1-221ENST00000582240 LINC00308Q8TCZ7 52 aa12.38□□□□□ -0.43
PPP4R1-221ENST00000582240 HSBP1L1C9JCN9 74 aa12.37□□□□□ -0.43
PPP4R1-221ENST00000582240 ANAPC11Q9NYG5 84 aa12.37□□□□□ -0.43
PPP4R1-221ENST00000582240 PRYO14603 147 aa12.36□□□□□ -0.43
PPP4R1-221ENST00000582240 SCGB1D4Q6XE38 83 aa12.36□□□□□ -0.43
PPP4R1-221ENST00000582240 LOC105371267A0A1B0GV96 52 aa12.35□□□□□ -0.43
PPP4R1-221ENST00000582240 NDUFC2O95298 119 aa12.35□□□□□ -0.43
PPP4R1-221ENST00000582240 DDTP30046 118 aa12.35□□□□□ -0.43
PPP4R1-221ENST00000582240 KCNQ1DNQ9H478 68 aa12.35□□□□□ -0.43
PPP4R1-221ENST00000582240 SPANXB1Q9NS25 103 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-221ENST00000582240 TRBV10-2A0A0K0K1G8 114 aa12.34□□□□□ -0.43
PPP4R1-221ENST00000582240 S100A7L2Q5SY68 101 aa12.32□□□□□ -0.44
PPP4R1-221ENST00000582240 VAMP8Q9BV40 100 aa12.32□□□□□ -0.44
PPP4R1-221ENST00000582240 HIGD2AQ9BW72 106 aa12.32□□□□□ -0.44
PPP4R1-221ENST00000582240 PAM16Q9Y3D7 125 aa12.32□□□□□ -0.44
PPP4R1-221ENST00000582240 SPRR1AP35321 89 aa12.31□□□□□ -0.44
PPP4R1-221ENST00000582240 SPATA45Q537H7 98 aa12.3□□□□□ -0.44
PPP4R1-221ENST00000582240 ETDCA0A1B0GVM5 59 aa12.29□□□□□ -0.44
PPP4R1-221ENST00000582240 KRTAP4-16G5E9R7 235 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-221ENST00000582240 IGLV6-57P01721 117 aa12.29□□□□□ -0.44
PPP4R1-221ENST00000582240 SPANXDQ9BXN6 97 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms