RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 IGLV5-37A0A075B6J1 123 aa9.99□□□□□ -0.81
CCDC57-213ENST00000581625 TIMM17BO60830 172 aa9.99□□□□□ -0.81
CCDC57-213ENST00000581625 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
CCDC57-213ENST00000581625 RPL37AP61513 92 aaKnown RBP9.98□□□□□ -0.81
CCDC57-213ENST00000581625 RPL24P83731 157 aaKnown RBP9.98□□□□□ -0.81
CCDC57-213ENST00000581625 TTTY13Q9BZ97 58 aa9.98□□□□□ -0.81
CCDC57-213ENST00000581625 LBHQ53QV2 105 aaPredicted RBP9.97□□□□□ -0.81
CCDC57-213ENST00000581625 SCGB1D4Q6XE38 83 aa9.97□□□□□ -0.81
CCDC57-213ENST00000581625 PHF5AQ7RTV0 110 aaKnown RBP9.97□□□□□ -0.81
CCDC57-213ENST00000581625 NKAPP1Q8N9T2 125 aa9.97□□□□□ -0.81
CCDC57-213ENST00000581625 MIEN1Q9BRT3 115 aa9.97□□□□□ -0.81
CCDC57-213ENST00000581625 FAT1Q14517 4588 aa9.96□□□□□ -0.81
CCDC57-213ENST00000581625 MRPL55Q7Z7F7 128 aaKnown RBP9.96□□□□□ -0.82
CCDC57-213ENST00000581625 C22orf24Q9Y442 160 aa9.96□□□□□ -0.82
CCDC57-213ENST00000581625 LOC107984156A0A0G2JMH3 177 aa9.95□□□□□ -0.82
CCDC57-213ENST00000581625 TMEM238C9JI98 176 aa9.95□□□□□ -0.82
CCDC57-213ENST00000581625 VPREB1P12018 145 aa9.95□□□□□ -0.82
CCDC57-213ENST00000581625 PCP2Q8IVA1 136 aa9.95□□□□□ -0.82
CCDC57-213ENST00000581625 ARL17AQ8IVW1 177 aa9.95□□□□□ -0.82
CCDC57-213ENST00000581625 DAND5Q8N907 189 aa9.95□□□□□ -0.82
CCDC57-213ENST00000581625 KRTAP17-1Q9BYP8 105 aa9.95□□□□□ -0.82
CCDC57-213ENST00000581625 UBE2BP63146 152 aa9.94□□□□□ -0.82
CCDC57-213ENST00000581625 BOD1L2Q8IYS8 172 aa9.94□□□□□ -0.82
CCDC57-213ENST00000581625 LITAFQ99732 161 aa9.94□□□□□ -0.82
CCDC57-213ENST00000581625 VAMP8Q9BV40 100 aa9.94□□□□□ -0.82
CCDC57-213ENST00000581625 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
CCDC57-213ENST00000581625 PYY3Q5JQD4 70 aa9.93□□□□□ -0.82
CCDC57-213ENST00000581625 ADAMTSL4-AS1Q5T5F5 129 aa9.92□□□□□ -0.82
CCDC57-213ENST00000581625 VPS13BQ7Z7G8 4022 aa9.92□□□□□ -0.82
CCDC57-213ENST00000581625 KRTAP10-4P60372 401 aaPredicted RBP9.91□□□□□ -0.82
CCDC57-213ENST00000581625 Q6ZVH6 145 aa9.91□□□□□ -0.82
CCDC57-213ENST00000581625 SPANXDQ9BXN6 97 aa9.91□□□□□ -0.82
CCDC57-213ENST00000581625 SPANXCQ9NY87 97 aa9.91□□□□□ -0.82
CCDC57-213ENST00000581625 PAM16Q9Y3D7 125 aa9.91□□□□□ -0.82
CCDC57-213ENST00000581625 NDUFC2O95298 119 aa9.9□□□□□ -0.82
CCDC57-213ENST00000581625 COX8AP10176 69 aa9.9□□□□□ -0.82
CCDC57-213ENST00000581625 SPATA45Q537H7 98 aa9.9□□□□□ -0.82
CCDC57-213ENST00000581625 Q8NDZ9 215 aa9.9□□□□□ -0.82
CCDC57-213ENST00000581625 COPS9Q8WXC6 57 aa9.9□□□□□ -0.82
CCDC57-213ENST00000581625 LINC00167Q96N53 147 aa9.89□□□□□ -0.83
CCDC57-213ENST00000581625 PSORS1C2Q9UIG4 136 aa9.89□□□□□ -0.83
CCDC57-213ENST00000581625 M0R378 163 aa9.88□□□□□ -0.83
CCDC57-213ENST00000581625 LINC00308Q8TCZ7 52 aa9.88□□□□□ -0.83
CCDC57-213ENST00000581625 KRTAP4-5Q9BYR2 181 aa9.88□□□□□ -0.83
CCDC57-213ENST00000581625 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
CCDC57-213ENST00000581625 SPANXB1Q9NS25 103 aaPredicted RBP9.88□□□□□ -0.83
CCDC57-213ENST00000581625 TRBV10-2A0A0K0K1G8 114 aa9.87□□□□□ -0.83
CCDC57-213ENST00000581625 GAGE10A6NGK3 116 aa9.87□□□□□ -0.83
CCDC57-213ENST00000581625 DLEU1O43261 78 aa9.87□□□□□ -0.83
CCDC57-213ENST00000581625 IFITM1P13164 125 aa9.87□□□□□ -0.83
CCDC57-213ENST00000581625 NPC2P61916 151 aa9.87□□□□□ -0.83
CCDC57-213ENST00000581625 SOSTDC1Q6X4U4 206 aa9.87□□□□□ -0.83
CCDC57-213ENST00000581625 ABCA13Q86UQ4 5058 aa9.86□□□□□ -0.83
CCDC57-213ENST00000581625 NCR3O14931 201 aa9.86□□□□□ -0.83
CCDC57-213ENST00000581625 C1orf137Q5JT78 98 aa9.86□□□□□ -0.83
CCDC57-213ENST00000581625 KRTAP11-1Q8IUC1 163 aa9.86□□□□□ -0.83
CCDC57-213ENST00000581625 IGLV1-50A0A075B6I6 118 aa9.85□□□□□ -0.83
CCDC57-213ENST00000581625 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
CCDC57-213ENST00000581625 IGKV2-28A0A075B6P5 120 aa9.84□□□□□ -0.83
CCDC57-213ENST00000581625 EIF4EBP3O60516 100 aaPredicted RBP9.84□□□□□ -0.83
CCDC57-213ENST00000581625 IGKV2D-28P01615 120 aa9.84□□□□□ -0.83
CCDC57-213ENST00000581625 PCLOQ9Y6V0 5065 aa9.84□□□□□ -0.83
CCDC57-213ENST00000581625 INAFM2P0DMQ5 153 aa9.83□□□□□ -0.84
CCDC57-213ENST00000581625 S100A12P80511 92 aa9.83□□□□□ -0.84
CCDC57-213ENST00000581625 SLC25A34Q6PIV7 304 aa9.83□□□□□ -0.84
CCDC57-213ENST00000581625 C14orf144Q96I85 54 aa9.83□□□□□ -0.84
CCDC57-213ENST00000581625 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.845e-7■□□□□ 9.5
CCDC57-213ENST00000581625 BCE1O60756 84 aa9.81□□□□□ -0.84
CCDC57-213ENST00000581625 IGLV7-43P04211 117 aa9.81□□□□□ -0.84
CCDC57-213ENST00000581625 SRRM2Q9UQ35 2752 aaKnown RBP9.81□□□□□ -0.84
CCDC57-213ENST00000581625 PRYO14603 147 aa9.8□□□□□ -0.84
CCDC57-213ENST00000581625 SMIM6P0DI80 62 aa9.8□□□□□ -0.84
CCDC57-213ENST00000581625 S100A7L2Q5SY68 101 aa9.8□□□□□ -0.84
CCDC57-213ENST00000581625 LINC00518Q8N0U6 118 aa9.8□□□□□ -0.84
CCDC57-213ENST00000581625 TMEM126AQ9H061 195 aa9.8□□□□□ -0.84
CCDC57-213ENST00000581625 DDTP30046 118 aa9.79□□□□□ -0.84
CCDC57-213ENST00000581625 HNRNPA3P51991 378 aaKnown RBP9.79□□□□□ -0.84
CCDC57-213ENST00000581625 REG3GQ6UW15 175 aa9.79□□□□□ -0.84
CCDC57-213ENST00000581625 SPINK6Q6UWN8 80 aa9.79□□□□□ -0.84
CCDC57-213ENST00000581625 MUSTN1Q8IVN3 82 aa9.79□□□□□ -0.84
CCDC57-213ENST00000581625 HIGD1BQ9P298 99 aa9.79□□□□□ -0.84
CCDC57-213ENST00000581625 CBY1Q9Y3M2 126 aa9.79□□□□□ -0.84
CCDC57-213ENST00000581625 TRBV10-3A0A0K0K1G6 114 aa9.78□□□□□ -0.84
CCDC57-213ENST00000581625 KCNQ1DNQ9H478 68 aa9.78□□□□□ -0.84
CCDC57-213ENST00000581625 IGLV6-57P01721 117 aa9.77□□□□□ -0.85
CCDC57-213ENST00000581625 HIST1H4GQ99525 98 aa9.77□□□□□ -0.85
CCDC57-213ENST00000581625 RPL28P46779 137 aaKnown RBP9.76□□□□□ -0.85
CCDC57-213ENST00000581625 PKHD1L1Q86WI1 4243 aa9.75□□□□□ -0.85
CCDC57-213ENST00000581625 ZNF861PO60384 105 aa9.75□□□□□ -0.85
CCDC57-213ENST00000581625 UBE2AP49459 152 aa9.75□□□□□ -0.85
CCDC57-213ENST00000581625 C2orf91Q6ZV80 131 aa9.75□□□□□ -0.85
CCDC57-213ENST00000581625 TRAV23DV6A0A075B6W5 121 aa9.74□□□□□ -0.85
CCDC57-213ENST00000581625 LOC105371267A0A1B0GV96 52 aa9.74□□□□□ -0.85
CCDC57-213ENST00000581625 SPRR1AP35321 89 aa9.74□□□□□ -0.85
CCDC57-213ENST00000581625 LINC00337Q8N6G1 96 aa9.74□□□□□ -0.85
CCDC57-213ENST00000581625 DIRC1Q969H9 104 aa9.74□□□□□ -0.85
CCDC57-213ENST00000581625 FAM19A1Q7Z5A9 133 aa9.73□□□□□ -0.85
CCDC57-213ENST00000581625 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
CCDC57-213ENST00000581625 H0Y9J4 135 aa9.72□□□□□ -0.85
CCDC57-213ENST00000581625 TAL2Q16559 108 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms