RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 LAMTOR2Q9Y2Q5 125 aa2.38□□□□□ -2.03
DDX42-211ENST00000580108 TRBV30A0A0K0K1B3 111 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 RPL37AP8A6NKH3 93 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 SMIM1B2RUZ4 78 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 NDUFC2-KCTD14E9PQ53 114 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 S100A1P23297 94 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 RAB5BP61020 215 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 UBE2BP63146 152 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 FABP9Q0Z7S8 132 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 NDUFA5Q16718 116 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 C6orf226Q5I0X4 101 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 Q6ZN92 141 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 Q8NDZ9 215 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 PACRGQ96M98 296 aaPredicted RBP2.37□□□□□ -2.03
DDX42-211ENST00000580108 C2orf88Q9BSF0 95 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 CST9LQ9H4G1 147 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 GEMIN7Q9H840 131 aaKnown RBP2.37□□□□□ -2.03
DDX42-211ENST00000580108 NXT2Q9NPJ8 142 aaKnown RBP2.37□□□□□ -2.03
DDX42-211ENST00000580108 ANAPC11Q9NYG5 84 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 C22orf24Q9Y442 160 aa2.37□□□□□ -2.03
DDX42-211ENST00000580108 LPAP08519 4548 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 H0Y9J4 135 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 NDUFA6P56556 154 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 DSCR10P59022 87 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 CKS1BP61024 79 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 HERVK_113P63121 156 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 C10orf91Q5T1B1 145 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 UQCC3Q6UW78 93 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 FA2HQ7L5A8 372 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 ERASQ7Z444 233 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 FAM19A3Q7Z5A8 133 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 Q8IZM0 81 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 LINC01561Q8N1V8 128 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 C18orf32Q8TCD1 76 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 COX7B2Q8TF08 81 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 ZNF625Q96I27 306 aaPredicted RBP2.36□□□□□ -2.03
DDX42-211ENST00000580108 TIMM17AQ99595 171 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 SEC11CQ9BY50 192 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 PKIGQ9Y2B9 76 aa2.36□□□□□ -2.03
DDX42-211ENST00000580108 CARHSP1Q9Y2V2 147 aaKnown RBP2.36□□□□□ -2.03
DDX42-211ENST00000580108 TRAV9-1A0A075B6T8 112 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 IGLV9-49A0A0B4J1Y8 123 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 TINCRA0A1B0GVN0 87 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 LINC01546A6NGU7 62 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 C11orf86A6NJI1 115 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 F8VRH5 84 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 F8WDY8 70 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 APOC3P02656 99 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 ZNF22P17026 224 aaPredicted RBP2.35□□□□□ -2.03
DDX42-211ENST00000580108 S100PP25815 95 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 PFN2P35080 140 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 PMVKQ15126 192 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 DIRC1Q969H9 104 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 LINC00167Q96N53 147 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 GNB1LQ9BYB4 327 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 SMCO4Q9NRQ5 59 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 TRAPPC1Q9Y5R8 145 aa2.35□□□□□ -2.03
DDX42-211ENST00000580108 A0A087X002 238 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 A0A0U1RRA0 63 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 TMEM238C9JI98 176 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 TSPAN13O95857 204 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 IGLC3P0DOY3 106 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 RHEBQ15382 184 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 KRTAP13-2Q52LG2 175 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 PDZD11Q5EBL8 140 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 MRPL55Q7Z7F7 128 aaKnown RBP2.34□□□□□ -2.03
DDX42-211ENST00000580108 CBLN2Q8IUK8 224 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 YPEL4Q96NS1 127 aa2.34□□□□□ -2.03
DDX42-211ENST00000580108 MUC2Q02817 5179 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 IGKV2-28A0A075B6P5 120 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 K7EMI3 77 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 ZNF861PO60384 105 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 IGKV2D-28P01615 120 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 HBDP02042 147 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 CTAG1AP78358 180 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 PRLHP81277 87 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 BAGE3Q86Y29 109 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 FAM19A2Q8N3H0 131 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 RETNLBQ9BQ08 111 aa2.33□□□□□ -2.04
DDX42-211ENST00000580108 H0Y8G0 127 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 NUPR1O60356 82 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 BCE1O60756 84 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 LINC00614P0C842 121 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 TSPEAR-AS2P59090 65 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 KRTAP12-2P59991 146 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 SEC11AP67812 179 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 PRR4Q16378 134 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 TMEM170BQ5T4T1 132 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 KRTAP13-1Q8IUC0 172 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 SLC7A5P1Q8MH63 180 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 C3orf22Q8N5N4 141 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 SND1-IT1Q9HBX3 110 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 ERG28Q9UKR5 140 aa2.32□□□□□ -2.04
DDX42-211ENST00000580108 CHTOPQ9Y3Y2 248 aaKnown RBP2.32□□□□□ -2.04
DDX42-211ENST00000580108 IGLV1-50A0A075B6I6 118 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 H3BRM9 83 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 M0R378 163 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 NCR3O14931 201 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 ATP5LO75964 103 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms