RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 LINC01600Q96MT4 127 aa8.83□□□□□ -1
MKS1-207ENST00000578789 MAP1LC3CQ9BXW4 147 aa8.83□□□□□ -1
MKS1-207ENST00000578789 SND1-IT1Q9HBX3 110 aa8.83□□□□□ -1
MKS1-207ENST00000578789 COA6Q5JTJ3 125 aaKnown RBP8.82□□□□□ -1
MKS1-207ENST00000578789 IGKCP01834 107 aa8.81□□□□□ -1
MKS1-207ENST00000578789 HERV-K104P63124 156 aa8.81□□□□□ -1
MKS1-207ENST00000578789 LEPROTO15243 131 aa8.8□□□□□ -1
MKS1-207ENST00000578789 S100A1P23297 94 aa8.8□□□□□ -1
MKS1-207ENST00000578789 LINC00167Q96N53 147 aa8.8□□□□□ -1
MKS1-207ENST00000578789 PMCHL2Q9BQD1 86 aa8.8□□□□□ -1
MKS1-207ENST00000578789 NDUFA12Q9UI09 145 aa8.8□□□□□ -1
MKS1-207ENST00000578789 LOC100996750A0A140TA64 210 aa8.79□□□□□ -1
MKS1-207ENST00000578789 SYS1-DBNDD2H3BUS1 97 aa8.79□□□□□ -1
MKS1-207ENST00000578789 VPREB1P12018 145 aa8.79□□□□□ -1
MKS1-207ENST00000578789 TSPEAR-AS2P59090 65 aa8.79□□□□□ -1
MKS1-207ENST00000578789 HERVK_113P61574 105 aa8.79□□□□□ -1
MKS1-207ENST00000578789 NKAPP1Q8N9T2 125 aa8.79□□□□□ -1
MKS1-207ENST00000578789 DIRC1Q969H9 104 aa8.79□□□□□ -1
MKS1-207ENST00000578789 PLEKHB2Q96CS7 222 aa8.79□□□□□ -1
MKS1-207ENST00000578789 KRTAP4-6Q9BYQ5 205 aa8.79□□□□□ -1
MKS1-207ENST00000578789 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
MKS1-207ENST00000578789 H0Y9J4 135 aa8.78□□□□□ -1
MKS1-207ENST00000578789 ATP6V1G1O75348 118 aa8.78□□□□□ -1
MKS1-207ENST00000578789 LINC00158P58513 81 aa8.78□□□□□ -1
MKS1-207ENST00000578789 TNXBP22105 4242 aa8.77□□□□□ -1.01
MKS1-207ENST00000578789 RPL24P83731 157 aaKnown RBP8.77□□□□□ -1.01
MKS1-207ENST00000578789 MEIG1Q5JSS6 88 aa8.77□□□□□ -1.01
MKS1-207ENST00000578789 LINC01545Q5VT33 79 aa8.77□□□□□ -1.01
MKS1-207ENST00000578789 GAGE10A6NGK3 116 aa8.76□□□□□ -1.01
MKS1-207ENST00000578789 RPL37AP8A6NKH3 93 aa8.76□□□□□ -1.01
MKS1-207ENST00000578789 LINC00587B1AMM8 73 aa8.76□□□□□ -1.01
MKS1-207ENST00000578789 J3QQQ9 107 aa8.76□□□□□ -1.01
MKS1-207ENST00000578789 BCE1O60756 84 aa8.76□□□□□ -1.01
MKS1-207ENST00000578789 SMIM13P0DJ93 91 aa8.76□□□□□ -1.01
MKS1-207ENST00000578789 PET117Q6UWS5 81 aa8.76□□□□□ -1.01
MKS1-207ENST00000578789 Q8NDZ9 215 aa8.76□□□□□ -1.01
MKS1-207ENST00000578789 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
MKS1-207ENST00000578789 ZNF861PO60384 105 aa8.75□□□□□ -1.01
MKS1-207ENST00000578789 NMUP48645 174 aa8.75□□□□□ -1.01
MKS1-207ENST00000578789 KRTAP10-8P60410 259 aa8.75□□□□□ -1.01
MKS1-207ENST00000578789 E9PLD3 99 aa8.74□□□□□ -1.01
MKS1-207ENST00000578789 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
MKS1-207ENST00000578789 C3orf79P0CE67 100 aa8.73□□□□□ -1.01
MKS1-207ENST00000578789 LGALS3P17931 250 aaKnown RBP8.73□□□□□ -1.01
MKS1-207ENST00000578789 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
MKS1-207ENST00000578789 HMCN2Q8NDA2 5059 aa8.71□□□□□ -1.02
MKS1-207ENST00000578789 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.02
MKS1-207ENST00000578789 IGKV2D-28P01615 120 aa8.71□□□□□ -1.02
MKS1-207ENST00000578789 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.02
MKS1-207ENST00000578789 RPL28P46779 137 aaKnown RBP8.71□□□□□ -1.02
MKS1-207ENST00000578789 LOC107984156A0A0G2JMH3 177 aa8.7□□□□□ -1.02
MKS1-207ENST00000578789 KRTAP13-1Q8IUC0 172 aa8.7□□□□□ -1.02
MKS1-207ENST00000578789 ARL17AQ8IVW1 177 aa8.7□□□□□ -1.02
MKS1-207ENST00000578789 M0R378 163 aa8.69□□□□□ -1.02
MKS1-207ENST00000578789 KRTDAPP60985 99 aa8.69□□□□□ -1.02
MKS1-207ENST00000578789 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
MKS1-207ENST00000578789 TMEM126AQ9H061 195 aa8.68□□□□□ -1.02
MKS1-207ENST00000578789 IGKV2D-26A0A0A0MRZ7 120 aa8.67□□□□□ -1.02
MKS1-207ENST00000578789 A0A0J9YXY3 114 aa8.67□□□□□ -1.02
MKS1-207ENST00000578789 TMEM238C9JI98 176 aa8.67□□□□□ -1.02
MKS1-207ENST00000578789 DAND5Q8N907 189 aa8.67□□□□□ -1.02
MKS1-207ENST00000578789 C20orf202A1L168 122 aa8.66□□□□□ -1.02
MKS1-207ENST00000578789 UBE2AP49459 152 aa8.66□□□□□ -1.02
MKS1-207ENST00000578789 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
MKS1-207ENST00000578789 NCR3O14931 201 aa8.65□□□□□ -1.02
MKS1-207ENST00000578789 PRYO14603 147 aa8.64□□□□□ -1.03
MKS1-207ENST00000578789 FAM19A1Q7Z5A9 133 aa8.64□□□□□ -1.03
MKS1-207ENST00000578789 HIST3H2BBQ8N257 126 aa8.64□□□□□ -1.03
MKS1-207ENST00000578789 TRBV10-2A0A0K0K1G8 114 aa8.63□□□□□ -1.03
MKS1-207ENST00000578789 AKR1D1P51857 326 aa8.63□□□□□ -1.03
MKS1-207ENST00000578789 PRLHP81277 87 aa8.63□□□□□ -1.03
MKS1-207ENST00000578789 MIEN1Q9BRT3 115 aa8.63□□□□□ -1.03
MKS1-207ENST00000578789 TIMM17BO60830 172 aa8.62□□□□□ -1.03
MKS1-207ENST00000578789 NDUFC2O95298 119 aa8.62□□□□□ -1.03
MKS1-207ENST00000578789 SPRR1AP35321 89 aa8.62□□□□□ -1.03
MKS1-207ENST00000578789 RPL13AP40429 203 aaKnown RBP8.62□□□□□ -1.03
MKS1-207ENST00000578789 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
MKS1-207ENST00000578789 SOSTDC1Q6X4U4 206 aa8.62□□□□□ -1.03
MKS1-207ENST00000578789 LITAFQ99732 161 aa8.62□□□□□ -1.03
MKS1-207ENST00000578789 HIST1H2BLQ99880 126 aa8.62□□□□□ -1.03
MKS1-207ENST00000578789 KCNQ1DNQ9H478 68 aa8.62□□□□□ -1.03
MKS1-207ENST00000578789 ZNF815PA8K554 130 aa8.61□□□□□ -1.03
MKS1-207ENST00000578789 SPANXB1Q9NS25 103 aaPredicted RBP8.61□□□□□ -1.03
MKS1-207ENST00000578789 TRBV10-3A0A0K0K1G6 114 aa8.6□□□□□ -1.03
MKS1-207ENST00000578789 S100A2P29034 98 aa8.6□□□□□ -1.03
MKS1-207ENST00000578789 TTTY13Q9BZ97 58 aa8.6□□□□□ -1.03
MKS1-207ENST00000578789 EIF4EBP3O60516 100 aaPredicted RBP8.59□□□□□ -1.03
MKS1-207ENST00000578789 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
MKS1-207ENST00000578789 LINC00337Q8N6G1 96 aa8.59□□□□□ -1.03
MKS1-207ENST00000578789 KRTAP4-16G5E9R7 235 aaPredicted RBP8.58□□□□□ -1.04
MKS1-207ENST00000578789 S100A6P06703 90 aa8.58□□□□□ -1.04
MKS1-207ENST00000578789 DDTP30046 118 aa8.58□□□□□ -1.04
MKS1-207ENST00000578789 ATOH7Q8N100 152 aa8.58□□□□□ -1.04
MKS1-207ENST00000578789 A0A087X002 238 aa8.57□□□□□ -1.04
MKS1-207ENST00000578789 NPC2P61916 151 aa8.57□□□□□ -1.04
MKS1-207ENST00000578789 IGLV6-57P01721 117 aa8.56□□□□□ -1.04
MKS1-207ENST00000578789 CRYGAP11844 174 aa8.56□□□□□ -1.04
MKS1-207ENST00000578789 SNRPEP62304 92 aaKnown RBP8.56□□□□□ -1.04
MKS1-207ENST00000578789 S100A12P80511 92 aa8.56□□□□□ -1.04
MKS1-207ENST00000578789 FAM229BQ4G0N7 80 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms