RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 XAGE1AQ9HD64 81 aa7.63□□□□□ -1.19
SMARCD2-207ENST00000578234 HERVK_113P61574 105 aa7.62□□□□□ -1.19
SMARCD2-207ENST00000578234 SNRPEP62304 92 aaKnown RBP7.62□□□□□ -1.19
SMARCD2-207ENST00000578234 UBE2BP63146 152 aa7.62□□□□□ -1.19
SMARCD2-207ENST00000578234 PRR4Q16378 134 aa7.62□□□□□ -1.19
SMARCD2-207ENST00000578234 C9orf129Q5T035 196 aaKnown RBP7.62□□□□□ -1.19
SMARCD2-207ENST00000578234 A0A0U1RRA0 63 aa7.61□□□□□ -1.19
SMARCD2-207ENST00000578234 H0Y9J4 135 aa7.61□□□□□ -1.19
SMARCD2-207ENST00000578234 TSPEAR-AS2P59090 65 aa7.61□□□□□ -1.19
SMARCD2-207ENST00000578234 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
SMARCD2-207ENST00000578234 HIST1H2BLQ99880 126 aa7.61□□□□□ -1.19
SMARCD2-207ENST00000578234 ERG28Q9UKR5 140 aa7.61□□□□□ -1.19
SMARCD2-207ENST00000578234 LEPROTO15243 131 aa7.6□□□□□ -1.19
SMARCD2-207ENST00000578234 C20orf202A1L168 122 aa7.59□□□□□ -1.19
SMARCD2-207ENST00000578234 ATOH7Q8N100 152 aa7.59□□□□□ -1.19
SMARCD2-207ENST00000578234 PLEKHB2Q96CS7 222 aa7.59□□□□□ -1.19
SMARCD2-207ENST00000578234 NDUFA12Q9UI09 145 aa7.59□□□□□ -1.19
SMARCD2-207ENST00000578234 IGLV1-50A0A075B6I6 118 aa7.58□□□□□ -1.2
SMARCD2-207ENST00000578234 J3QQQ9 107 aa7.58□□□□□ -1.2
SMARCD2-207ENST00000578234 LGALS3P17931 250 aaKnown RBP7.58□□□□□ -1.2
SMARCD2-207ENST00000578234 LINC00158P58513 81 aa7.58□□□□□ -1.2
SMARCD2-207ENST00000578234 MEIG1Q5JSS6 88 aa7.58□□□□□ -1.2
SMARCD2-207ENST00000578234 SFTA2Q6UW10 78 aa7.58□□□□□ -1.2
SMARCD2-207ENST00000578234 KRTAP7-1Q8IUC3 87 aa7.58□□□□□ -1.2
SMARCD2-207ENST00000578234 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
SMARCD2-207ENST00000578234 C5orf52A6NGY3 159 aa7.57□□□□□ -1.2
SMARCD2-207ENST00000578234 SMIM13P0DJ93 91 aa7.57□□□□□ -1.2
SMARCD2-207ENST00000578234 E9PLD3 99 aa7.56□□□□□ -1.2
SMARCD2-207ENST00000578234 M0QXV9 152 aa7.56□□□□□ -1.2
SMARCD2-207ENST00000578234 KRTAP1-4P0C5Y4 121 aa7.56□□□□□ -1.2
SMARCD2-207ENST00000578234 SND1-IT1Q9HBX3 110 aa7.56□□□□□ -1.2
SMARCD2-207ENST00000578234 TMA7Q9Y2S6 64 aaKnown RBP7.56□□□□□ -1.2
SMARCD2-207ENST00000578234 HERV-K104P63124 156 aa7.55□□□□□ -1.2
SMARCD2-207ENST00000578234 COX17Q14061 63 aa7.55□□□□□ -1.2
SMARCD2-207ENST00000578234 LPAP08519 4548 aa7.55□□□□□ -1.2
SMARCD2-207ENST00000578234 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
SMARCD2-207ENST00000578234 TSPAN13O95857 204 aa7.54□□□□□ -1.2
SMARCD2-207ENST00000578234 C22orf24Q9Y442 160 aa7.54□□□□□ -1.2
SMARCD2-207ENST00000578234 RPL13AP40429 203 aaKnown RBP7.53□□□□□ -1.2
SMARCD2-207ENST00000578234 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
SMARCD2-207ENST00000578234 MIR7-3HGQ8N6C7 128 aa7.53□□□□□ -1.2
SMARCD2-207ENST00000578234 TTTY13Q9BZ97 58 aa7.53□□□□□ -1.2
SMARCD2-207ENST00000578234 NMUP48645 174 aa7.52□□□□□ -1.21
SMARCD2-207ENST00000578234 DAND5Q8N907 189 aa7.52□□□□□ -1.21
SMARCD2-207ENST00000578234 GAGE10A6NGK3 116 aa7.51□□□□□ -1.21
SMARCD2-207ENST00000578234 SCGB1D1O95968 90 aa7.51□□□□□ -1.21
SMARCD2-207ENST00000578234 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
SMARCD2-207ENST00000578234 ZNF815PA8K554 130 aa7.5□□□□□ -1.21
SMARCD2-207ENST00000578234 LINC00587B1AMM8 73 aa7.5□□□□□ -1.21
SMARCD2-207ENST00000578234 ZNF861PO60384 105 aa7.5□□□□□ -1.21
SMARCD2-207ENST00000578234 MRPL55Q7Z7F7 128 aaKnown RBP7.5□□□□□ -1.21
SMARCD2-207ENST00000578234 NKAPP1Q8N9T2 125 aa7.5□□□□□ -1.21
SMARCD2-207ENST00000578234 Q8NDZ9 215 aa7.5□□□□□ -1.21
SMARCD2-207ENST00000578234 RPL37AP8A6NKH3 93 aa7.49□□□□□ -1.21
SMARCD2-207ENST00000578234 NPC2P61916 151 aa7.49□□□□□ -1.21
SMARCD2-207ENST00000578234 LBHQ53QV2 105 aaPredicted RBP7.49□□□□□ -1.21
SMARCD2-207ENST00000578234 VPREB1P12018 145 aa7.48□□□□□ -1.21
SMARCD2-207ENST00000578234 AKR1D1P51857 326 aa7.48□□□□□ -1.21
SMARCD2-207ENST00000578234 RPL24P83731 157 aaKnown RBP7.48□□□□□ -1.21
SMARCD2-207ENST00000578234 BOD1L2Q8IYS8 172 aa7.48□□□□□ -1.21
SMARCD2-207ENST00000578234 LINC00167Q96N53 147 aa7.48□□□□□ -1.21
SMARCD2-207ENST00000578234 IGLV5-37A0A075B6J1 123 aa7.47□□□□□ -1.21
SMARCD2-207ENST00000578234 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
SMARCD2-207ENST00000578234 HSBP1L1C9JCN9 74 aa7.47□□□□□ -1.21
SMARCD2-207ENST00000578234 ADAMTSL4-AS1Q5T5F5 129 aa7.47□□□□□ -1.21
SMARCD2-207ENST00000578234 PCP2Q8IVA1 136 aa7.47□□□□□ -1.21
SMARCD2-207ENST00000578234 TP73-AS1Q9UF72 201 aa7.47□□□□□ -1.21
SMARCD2-207ENST00000578234 NCR3O14931 201 aa7.46□□□□□ -1.22
SMARCD2-207ENST00000578234 IGKV2-28A0A075B6P5 120 aa7.45□□□□□ -1.22
SMARCD2-207ENST00000578234 IGKV2D-28P01615 120 aa7.45□□□□□ -1.22
SMARCD2-207ENST00000578234 SCGB1D4Q6XE38 83 aa7.45□□□□□ -1.22
SMARCD2-207ENST00000578234 MIEN1Q9BRT3 115 aa7.45□□□□□ -1.22
SMARCD2-207ENST00000578234 SOSTDC1Q6X4U4 206 aa7.44□□□□□ -1.22
SMARCD2-207ENST00000578234 EIF4EBP3O60516 100 aaPredicted RBP7.43□□□□□ -1.22
SMARCD2-207ENST00000578234 RPL28P46779 137 aaKnown RBP7.43□□□□□ -1.22
SMARCD2-207ENST00000578234 LITAFQ99732 161 aa7.43□□□□□ -1.22
SMARCD2-207ENST00000578234 MUC2Q02817 5179 aa7.43□□□□□ -1.22
SMARCD2-207ENST00000578234 M0R378 163 aa7.42□□□□□ -1.22
SMARCD2-207ENST00000578234 BCE1O60756 84 aa7.42□□□□□ -1.22
SMARCD2-207ENST00000578234 TIMM17BO60830 172 aa7.42□□□□□ -1.22
SMARCD2-207ENST00000578234 TYMSOSQ8TAI1 123 aa7.42□□□□□ -1.22
SMARCD2-207ENST00000578234 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
SMARCD2-207ENST00000578234 A0A087X002 238 aa7.4□□□□□ -1.22
SMARCD2-207ENST00000578234 LOC107984156A0A0G2JMH3 177 aa7.4□□□□□ -1.22
SMARCD2-207ENST00000578234 TMEM238C9JI98 176 aa7.4□□□□□ -1.22
SMARCD2-207ENST00000578234 CRYGAP11844 174 aa7.4□□□□□ -1.22
SMARCD2-207ENST00000578234 JOSD1Q15040 202 aaPredicted RBP7.4□□□□□ -1.22
SMARCD2-207ENST00000578234 ARL17AQ8IVW1 177 aa7.4□□□□□ -1.22
SMARCD2-207ENST00000578234 ANAPC11Q9NYG5 84 aa7.4□□□□□ -1.22
SMARCD2-207ENST00000578234 PAM16Q9Y3D7 125 aa7.4□□□□□ -1.22
SMARCD2-207ENST00000578234 TRBV10-3A0A0K0K1G6 114 aa7.38□□□□□ -1.23
SMARCD2-207ENST00000578234 UBE2AP49459 152 aa7.38□□□□□ -1.23
SMARCD2-207ENST00000578234 SPATA45Q537H7 98 aa7.38□□□□□ -1.23
SMARCD2-207ENST00000578234 RETNLBQ9BQ08 111 aa7.38□□□□□ -1.23
SMARCD2-207ENST00000578234 FAM19A1Q7Z5A9 133 aa7.37□□□□□ -1.23
SMARCD2-207ENST00000578234 VAMP8Q9BV40 100 aa7.37□□□□□ -1.23
SMARCD2-207ENST00000578234 SPANXDQ9BXN6 97 aa7.37□□□□□ -1.23
SMARCD2-207ENST00000578234 TMEM126AQ9H061 195 aa7.37□□□□□ -1.23
SMARCD2-207ENST00000578234 SPANXB1Q9NS25 103 aaPredicted RBP7.37□□□□□ -1.23
SMARCD2-207ENST00000578234 SPANXCQ9NY87 97 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms