RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 XCL1P47992 114 aa6.93□□□□□ -1.3
SMARCE1-214ENST00000578112 LYRM7Q5U5X0 104 aa6.93□□□□□ -1.3
SMARCE1-214ENST00000578112 C3orf22Q8N5N4 141 aa6.93□□□□□ -1.3
SMARCE1-214ENST00000578112 RPL39LQ96EH5 51 aaKnown RBP6.93□□□□□ -1.3
SMARCE1-214ENST00000578112 PYGO1Q9Y3Y4 419 aa6.93□□□□□ -1.3
SMARCE1-214ENST00000578112 TRAPPC1Q9Y5R8 145 aa6.93□□□□□ -1.3
SMARCE1-214ENST00000578112 TSHBP01222 138 aa6.93□□□□□ -1.3
SMARCE1-214ENST00000578112 PFN2P35080 140 aa6.93□□□□□ -1.3
SMARCE1-214ENST00000578112 LINC00526Q96FQ7 95 aa6.93□□□□□ -1.3
SMARCE1-214ENST00000578112 TIMM21Q9BVV7 248 aa6.93□□□□□ -1.3
SMARCE1-214ENST00000578112 SYS1-DBNDD2H3BUS1 97 aa6.92□□□□□ -1.3
SMARCE1-214ENST00000578112 SERF1AO75920 110 aa6.92□□□□□ -1.3
SMARCE1-214ENST00000578112 POLR2KP53803 58 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-214ENST00000578112 LINC00310P59036 64 aa6.92□□□□□ -1.3
SMARCE1-214ENST00000578112 TRAV26-2A0A0B4J265 109 aa6.91□□□□□ -1.3
SMARCE1-214ENST00000578112 H3BMG7 143 aa6.91□□□□□ -1.3
SMARCE1-214ENST00000578112 COX7A2LO14548 114 aa6.91□□□□□ -1.3
SMARCE1-214ENST00000578112 C3orf79P0CE67 100 aa6.91□□□□□ -1.3
SMARCE1-214ENST00000578112 NUP35Q8NFH5 326 aa6.91□□□□□ -1.3
SMARCE1-214ENST00000578112 TMEM258P61165 79 aa6.91□□□□□ -1.3
SMARCE1-214ENST00000578112 DIRC1Q969H9 104 aa6.91□□□□□ -1.3
SMARCE1-214ENST00000578112 VCYO14598 125 aa6.9□□□□□ -1.3
SMARCE1-214ENST00000578112 IGLV1-50A0A075B6I6 118 aa6.9□□□□□ -1.31
SMARCE1-214ENST00000578112 TLX1NBP0CAT3 122 aa6.89□□□□□ -1.31
SMARCE1-214ENST00000578112 CAMK2N2Q96S95 79 aa6.89□□□□□ -1.31
SMARCE1-214ENST00000578112 A0A1B0GUT8 65 aa6.89□□□□□ -1.31
SMARCE1-214ENST00000578112 PPDPFLQ8WWR9 84 aa6.89□□□□□ -1.31
SMARCE1-214ENST00000578112 MRPL35Q9NZE8 188 aaKnown RBP6.89□□□□□ -1.31
SMARCE1-214ENST00000578112 GAS8-AS1O95177 125 aa6.88□□□□□ -1.31
SMARCE1-214ENST00000578112 GAGE2AQ6NT46 116 aa6.88□□□□□ -1.31
SMARCE1-214ENST00000578112 BAGE3Q86Y29 109 aa6.88□□□□□ -1.31
SMARCE1-214ENST00000578112 PRO0461Q9UI25 63 aa6.88□□□□□ -1.31
SMARCE1-214ENST00000578112 MRPL55Q7Z7F7 128 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-214ENST00000578112 CRYGAP11844 174 aa6.87□□□□□ -1.31
SMARCE1-214ENST00000578112 OSTCQ9NRP0 149 aa6.87□□□□□ -1.31
SMARCE1-214ENST00000578112 UBE2D4Q9Y2X8 147 aa6.87□□□□□ -1.31
SMARCE1-214ENST00000578112 A0A1B0GWB2 263 aa6.87□□□□□ -1.31
SMARCE1-214ENST00000578112 IGLV7-43P04211 117 aa6.87□□□□□ -1.31
SMARCE1-214ENST00000578112 FCER1GP30273 86 aa6.87□□□□□ -1.31
SMARCE1-214ENST00000578112 RIGQ13278 110 aa6.87□□□□□ -1.31
SMARCE1-214ENST00000578112 A0A1W2PNN7 141 aa6.86□□□□□ -1.31
SMARCE1-214ENST00000578112 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-214ENST00000578112 LINC01561Q8N1V8 128 aa6.86□□□□□ -1.31
SMARCE1-214ENST00000578112 A0A0U1RQV1 116 aa6.85□□□□□ -1.31
SMARCE1-214ENST00000578112 H0Y9J4 135 aa6.85□□□□□ -1.31
SMARCE1-214ENST00000578112 SMIM13P0DJ93 91 aa6.85□□□□□ -1.31
SMARCE1-214ENST00000578112 SPAG11BQ08648 103 aa6.85□□□□□ -1.31
SMARCE1-214ENST00000578112 C1orf137Q5JT78 98 aa6.85□□□□□ -1.31
SMARCE1-214ENST00000578112 SUMO2P61956 95 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-214ENST00000578112 MRPS36P82909 103 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-214ENST00000578112 RAB37Q96AX2 223 aa6.84□□□□□ -1.31
SMARCE1-214ENST00000578112 NDUFA1O15239 70 aa6.84□□□□□ -1.31
SMARCE1-214ENST00000578112 PRR26Q8N8Z3 221 aa6.84□□□□□ -1.31
SMARCE1-214ENST00000578112 TRAV9-1A0A075B6T8 112 aa6.83□□□□□ -1.32
SMARCE1-214ENST00000578112 RPL18AQ02543 176 aaKnown RBP6.83□□□□□ -1.32
SMARCE1-214ENST00000578112 ANKRD29Q8N6D5 301 aa6.83□□□□□ -1.32
SMARCE1-214ENST00000578112 HIGD1CA8MV81 97 aa6.83□□□□□ -1.32
SMARCE1-214ENST00000578112 TMEM136Q6ZRR5 245 aa6.83□□□□□ -1.32
SMARCE1-214ENST00000578112 C2orf91Q6ZV80 131 aa6.83□□□□□ -1.32
SMARCE1-214ENST00000578112 NRACQ8N912 160 aa6.83□□□□□ -1.32
SMARCE1-214ENST00000578112 E9PLD3 99 aa6.82□□□□□ -1.32
SMARCE1-214ENST00000578112 COX8AP10176 69 aa6.82□□□□□ -1.32
SMARCE1-214ENST00000578112 FAM240AA0A1B0GVK7 77 aa6.82□□□□□ -1.32
SMARCE1-214ENST00000578112 TRACP01848 142 aa6.82□□□□□ -1.32
SMARCE1-214ENST00000578112 TRAV13-1A0A0B4J241 112 aa6.81□□□□□ -1.32
SMARCE1-214ENST00000578112 TRBV30A0A0K0K1B3 111 aa6.81□□□□□ -1.32
SMARCE1-214ENST00000578112 PHF5AQ7RTV0 110 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-214ENST00000578112 AMN1Q8IY45 258 aa6.81□□□□□ -1.32
SMARCE1-214ENST00000578112 LRP2P98164 4655 aa6.8□□□□□ -1.32
SMARCE1-214ENST00000578112 HBBP68871 147 aa6.8□□□□□ -1.32
SMARCE1-214ENST00000578112 TEN1Q86WV5 123 aa6.8□□□□□ -1.32
SMARCE1-214ENST00000578112 GNB1LQ9BYB4 327 aa6.8□□□□□ -1.32
SMARCE1-214ENST00000578112 RNF213Q63HN8 5207 aa6.8□□□□□ -1.32
SMARCE1-214ENST00000578112 IGHV3OR16-9A0A0B4J2B5 98 aa6.8□□□□□ -1.32
SMARCE1-214ENST00000578112 FAM104BQ5XKR9 115 aa6.8□□□□□ -1.32
SMARCE1-214ENST00000578112 SMIM7Q9BQ49 75 aa6.8□□□□□ -1.32
SMARCE1-214ENST00000578112 LAMTOR3Q9UHA4 124 aa6.8□□□□□ -1.32
SMARCE1-214ENST00000578112 C5orf38Q86SI9 138 aa6.79□□□□□ -1.32
SMARCE1-214ENST00000578112 IMUPQ9GZP8 106 aa6.79□□□□□ -1.32
SMARCE1-214ENST00000578112 ZC2HC1BQ5TFG8 222 aa6.79□□□□□ -1.32
SMARCE1-214ENST00000578112 V9GYV3 84 aa6.79□□□□□ -1.32
SMARCE1-214ENST00000578112 COX7CP15954 63 aa6.78□□□□□ -1.32
SMARCE1-214ENST00000578112 UBE2D1P51668 147 aa6.78□□□□□ -1.32
SMARCE1-214ENST00000578112 A0A087WZ39 114 aa6.77□□□□□ -1.32
SMARCE1-214ENST00000578112 TRBV7-7A0A0K0K1E9 115 aa6.77□□□□□ -1.33
SMARCE1-214ENST00000578112 KRTAP1-4P0C5Y4 121 aa6.77□□□□□ -1.33
SMARCE1-214ENST00000578112 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-214ENST00000578112 MRPL51Q4U2R6 128 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-214ENST00000578112 SMIM2Q9BVW6 85 aa6.77□□□□□ -1.33
SMARCE1-214ENST00000578112 BRK1Q8WUW1 75 aa6.76□□□□□ -1.33
SMARCE1-214ENST00000578112 MRPL18Q9H0U6 180 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-214ENST00000578112 C6orf48Q9UBA6 75 aa6.76□□□□□ -1.33
SMARCE1-214ENST00000578112 SMIM27A0A1W2PRY6 76 aa6.75□□□□□ -1.33
SMARCE1-214ENST00000578112 OPRPNQ99935 248 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1-214ENST00000578112 NDUFC2-KCTD14E9PQ53 114 aa6.75□□□□□ -1.33
SMARCE1-214ENST00000578112 SMKR1H3BMG3 65 aa6.74□□□□□ -1.33
SMARCE1-214ENST00000578112 CKS2P33552 79 aa6.74□□□□□ -1.33
SMARCE1-214ENST00000578112 KIAA0087Q14695 138 aa6.74□□□□□ -1.33
SMARCE1-214ENST00000578112 PRR15Q8IV56 129 aa6.74□□□□□ -1.33
SMARCE1-214ENST00000578112 CEND1Q8N111 149 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms