RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 MRPL55Q7Z7F7 128 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-206ENST00000578018 SYS1-DBNDD2H3BUS1 97 aa9.9□□□□□ -0.82
CDK5RAP3-206ENST00000578018 PLNP26678 52 aa9.9□□□□□ -0.82
CDK5RAP3-206ENST00000578018 H0Y8G0 127 aa9.89□□□□□ -0.83
CDK5RAP3-206ENST00000578018 BCE1O60756 84 aa9.88□□□□□ -0.83
CDK5RAP3-206ENST00000578018 DPM2O94777 84 aa9.88□□□□□ -0.83
CDK5RAP3-206ENST00000578018 PET117Q6UWS5 81 aa9.88□□□□□ -0.83
CDK5RAP3-206ENST00000578018 IGKCP01834 107 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 C3orf79P0CE67 100 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 RPL28P46779 137 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 SFTA2Q6UW10 78 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 HIST3H2BBQ8N257 126 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 A0A087X002 238 aa9.85□□□□□ -0.83
CDK5RAP3-206ENST00000578018 S100A6P06703 90 aa9.85□□□□□ -0.83
CDK5RAP3-206ENST00000578018 PRR4Q16378 134 aa9.85□□□□□ -0.83
CDK5RAP3-206ENST00000578018 IGLV5-37A0A075B6J1 123 aa9.84□□□□□ -0.83
CDK5RAP3-206ENST00000578018 RPL37AP8A6NKH3 93 aa9.84□□□□□ -0.83
CDK5RAP3-206ENST00000578018 PMCHL2Q9BQD1 86 aa9.84□□□□□ -0.83
CDK5RAP3-206ENST00000578018 GAGE10A6NGK3 116 aa9.83□□□□□ -0.84
CDK5RAP3-206ENST00000578018 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-206ENST00000578018 HIST1H2BLQ99880 126 aa9.82□□□□□ -0.84
CDK5RAP3-206ENST00000578018 C5orf52A6NGY3 159 aa9.81□□□□□ -0.84
CDK5RAP3-206ENST00000578018 LEPROTO15243 131 aa9.81□□□□□ -0.84
CDK5RAP3-206ENST00000578018 S100A2P29034 98 aa9.81□□□□□ -0.84
CDK5RAP3-206ENST00000578018 KRTDAPP60985 99 aa9.81□□□□□ -0.84
CDK5RAP3-206ENST00000578018 KRTAP13-1Q8IUC0 172 aa9.81□□□□□ -0.84
CDK5RAP3-206ENST00000578018 TSPAN13O95857 204 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 CRYGAP11844 174 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 HERVK_113P61574 105 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 SNRPEP62304 92 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 COX17Q14061 63 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 NKAPP1Q8N9T2 125 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 PLEKHB2Q96CS7 222 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 MUC2Q02817 5179 aa9.79□□□□□ -0.84
CDK5RAP3-206ENST00000578018 AKR1D1P51857 326 aa9.79□□□□□ -0.84
CDK5RAP3-206ENST00000578018 C20orf202A1L168 122 aa9.78□□□□□ -0.84
CDK5RAP3-206ENST00000578018 E9PLD3 99 aa9.78□□□□□ -0.84
CDK5RAP3-206ENST00000578018 TYMSOSQ8TAI1 123 aa9.78□□□□□ -0.84
CDK5RAP3-206ENST00000578018 ERG28Q9UKR5 140 aa9.78□□□□□ -0.84
CDK5RAP3-206ENST00000578018 UBE2AP49459 152 aa9.77□□□□□ -0.85
CDK5RAP3-206ENST00000578018 HERV-K104P63124 156 aa9.77□□□□□ -0.85
CDK5RAP3-206ENST00000578018 ANAPC11Q9NYG5 84 aa9.77□□□□□ -0.85
CDK5RAP3-206ENST00000578018 IGKV2-28A0A075B6P5 120 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 J3QQQ9 107 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 IGKV2D-28P01615 120 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 PFN2P35080 140 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 TSPEAR-AS2P59090 65 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 NDUFA12Q9UI09 145 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 MYMXA0A1B0GTQ4 84 aa9.75□□□□□ -0.85
CDK5RAP3-206ENST00000578018 NMUP48645 174 aa9.75□□□□□ -0.85
CDK5RAP3-206ENST00000578018 KRTAP13-2Q52LG2 175 aa9.75□□□□□ -0.85
CDK5RAP3-206ENST00000578018 LINC00587B1AMM8 73 aa9.74□□□□□ -0.85
CDK5RAP3-206ENST00000578018 VPREB1P12018 145 aa9.74□□□□□ -0.85
CDK5RAP3-206ENST00000578018 SND1-IT1Q9HBX3 110 aa9.74□□□□□ -0.85
CDK5RAP3-206ENST00000578018 FAM229BQ4G0N7 80 aa9.73□□□□□ -0.85
CDK5RAP3-206ENST00000578018 LGALS3P17931 250 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-206ENST00000578018 PRLHP81277 87 aa9.72□□□□□ -0.85
CDK5RAP3-206ENST00000578018 Q8NDZ9 215 aa9.71□□□□□ -0.86
CDK5RAP3-206ENST00000578018 TMEM126AQ9H061 195 aa9.71□□□□□ -0.86
CDK5RAP3-206ENST00000578018 TMEM238C9JI98 176 aa9.7□□□□□ -0.86
CDK5RAP3-206ENST00000578018 LINC00158P58513 81 aa9.69□□□□□ -0.86
CDK5RAP3-206ENST00000578018 RPL24P83731 157 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-206ENST00000578018 FAM19A1Q7Z5A9 133 aa9.69□□□□□ -0.86
CDK5RAP3-206ENST00000578018 IGKV2D-26A0A0A0MRZ7 120 aa9.68□□□□□ -0.86
CDK5RAP3-206ENST00000578018 M0R378 163 aa9.68□□□□□ -0.86
CDK5RAP3-206ENST00000578018 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
CDK5RAP3-206ENST00000578018 MEIG1Q5JSS6 88 aa9.68□□□□□ -0.86
CDK5RAP3-206ENST00000578018 LINC00304Q8N9R0 145 aa9.68□□□□□ -0.86
CDK5RAP3-206ENST00000578018 ATOH7Q8N100 152 aa9.67□□□□□ -0.86
CDK5RAP3-206ENST00000578018 LOC107984156A0A0G2JMH3 177 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 A0A0J9YXY3 114 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 ANKRD39Q53RE8 183 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 ARL17AQ8IVW1 177 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 MIR7-3HGQ8N6C7 128 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 RETNLBQ9BQ08 111 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 A0A0U1RRA0 63 aa9.64□□□□□ -0.87
CDK5RAP3-206ENST00000578018 TIMM17BO60830 172 aa9.63□□□□□ -0.87
CDK5RAP3-206ENST00000578018 ZNF815PA8K554 130 aa9.62□□□□□ -0.87
CDK5RAP3-206ENST00000578018 SCGB1D1O95968 90 aa9.62□□□□□ -0.87
CDK5RAP3-206ENST00000578018 A0A0U1RQV1 116 aa9.61□□□□□ -0.87
CDK5RAP3-206ENST00000578018 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
CDK5RAP3-206ENST00000578018 HSBP1L1C9JCN9 74 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 CTAG1AP78358 180 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 ADAMTSL4-AS1Q5T5F5 129 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 C3orf22Q8N5N4 141 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 LITAFQ99732 161 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 HIGD2AQ9BW72 106 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 TMA7Q9Y2S6 64 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 JOSD1Q15040 202 aaPredicted RBP9.59□□□□□ -0.87
CDK5RAP3-206ENST00000578018 TPRXLQ17RH7 258 aa9.58□□□□□ -0.88
CDK5RAP3-206ENST00000578018 PCP2Q8IVA1 136 aa9.58□□□□□ -0.88
CDK5RAP3-206ENST00000578018 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
CDK5RAP3-206ENST00000578018 DAND5Q8N907 189 aa9.57□□□□□ -0.88
CDK5RAP3-206ENST00000578018 SPRR4Q96PI1 79 aa9.57□□□□□ -0.88
CDK5RAP3-206ENST00000578018 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
CDK5RAP3-206ENST00000578018 IGLV7-46A0A075B6I9 117 aa9.56□□□□□ -0.88
CDK5RAP3-206ENST00000578018 NDUFC2O95298 119 aa9.55□□□□□ -0.88
CDK5RAP3-206ENST00000578018 FAT4Q6V0I7 4981 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms