RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 NKAPP1Q8N9T2 125 aa7.89□□□□□ -1.15
CDK5RAP3-203ENST00000577442 SND1-IT1Q9HBX3 110 aa7.89□□□□□ -1.15
CDK5RAP3-203ENST00000577442 C22orf24Q9Y442 160 aa7.89□□□□□ -1.15
CDK5RAP3-203ENST00000577442 E9PLD3 99 aa7.88□□□□□ -1.15
CDK5RAP3-203ENST00000577442 TSPEAR-AS2P59090 65 aa7.88□□□□□ -1.15
CDK5RAP3-203ENST00000577442 HIST3H2BBQ8N257 126 aa7.88□□□□□ -1.15
CDK5RAP3-203ENST00000577442 PSORS1C2Q9UIG4 136 aa7.88□□□□□ -1.15
CDK5RAP3-203ENST00000577442 IGLV5-37A0A075B6J1 123 aa7.87□□□□□ -1.15
CDK5RAP3-203ENST00000577442 SMIM13P0DJ93 91 aa7.87□□□□□ -1.15
CDK5RAP3-203ENST00000577442 RPL24P83731 157 aaKnown RBP7.87□□□□□ -1.15
CDK5RAP3-203ENST00000577442 MRPL55Q7Z7F7 128 aaKnown RBP7.87□□□□□ -1.15
CDK5RAP3-203ENST00000577442 A0A0U1RRA0 63 aa7.86□□□□□ -1.15
CDK5RAP3-203ENST00000577442 HNRNPA3P51991 378 aaKnown RBP7.86□□□□□ -1.15
CDK5RAP3-203ENST00000577442 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
CDK5RAP3-203ENST00000577442 HIST1H2BLQ99880 126 aa7.86□□□□□ -1.15
CDK5RAP3-203ENST00000577442 FAT3Q8TDW7 4589 aa7.86□□□□□ -1.15
CDK5RAP3-203ENST00000577442 SPINK6Q6UWN8 80 aa7.84□□□□□ -1.15
CDK5RAP3-203ENST00000577442 MIR7-3HGQ8N6C7 128 aa7.84□□□□□ -1.15
CDK5RAP3-203ENST00000577442 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
CDK5RAP3-203ENST00000577442 OXTP01178 125 aa7.83□□□□□ -1.16
CDK5RAP3-203ENST00000577442 VPREB1P12018 145 aa7.83□□□□□ -1.16
CDK5RAP3-203ENST00000577442 KRTAP29-1A8MX34 341 aaPredicted RBP7.82□□□□□ -1.16
CDK5RAP3-203ENST00000577442 IGLV7-43P04211 117 aa7.82□□□□□ -1.16
CDK5RAP3-203ENST00000577442 SNRPEP62304 92 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-203ENST00000577442 KRTAP11-1Q8IUC1 163 aa7.82□□□□□ -1.16
CDK5RAP3-203ENST00000577442 LINC00167Q96N53 147 aa7.82□□□□□ -1.16
CDK5RAP3-203ENST00000577442 A0A0J9YXY3 114 aa7.81□□□□□ -1.16
CDK5RAP3-203ENST00000577442 GAGE10A6NGK3 116 aa7.81□□□□□ -1.16
CDK5RAP3-203ENST00000577442 J3QL48 77 aa7.81□□□□□ -1.16
CDK5RAP3-203ENST00000577442 BOD1L2Q8IYS8 172 aa7.81□□□□□ -1.16
CDK5RAP3-203ENST00000577442 MIEN1Q9BRT3 115 aa7.81□□□□□ -1.16
CDK5RAP3-203ENST00000577442 C5orf52A6NGY3 159 aa7.8□□□□□ -1.16
CDK5RAP3-203ENST00000577442 ZNF815PA8K554 130 aa7.8□□□□□ -1.16
CDK5RAP3-203ENST00000577442 SRSF9Q13242 221 aaKnown RBP eCLIP7.8□□□□□ -1.16
CDK5RAP3-203ENST00000577442 REG3GQ6UW15 175 aa7.8□□□□□ -1.16
CDK5RAP3-203ENST00000577442 RPL37AP8A6NKH3 93 aa7.79□□□□□ -1.16
CDK5RAP3-203ENST00000577442 ATOH7Q8N100 152 aa7.79□□□□□ -1.16
CDK5RAP3-203ENST00000577442 DIRC1Q969H9 104 aa7.79□□□□□ -1.16
CDK5RAP3-203ENST00000577442 IGKV2D-26A0A0A0MRZ7 120 aa7.78□□□□□ -1.16
CDK5RAP3-203ENST00000577442 LOC107984156A0A0G2JMH3 177 aa7.78□□□□□ -1.16
CDK5RAP3-203ENST00000577442 HSBP1L1C9JCN9 74 aa7.78□□□□□ -1.16
CDK5RAP3-203ENST00000577442 M0R378 163 aa7.78□□□□□ -1.16
CDK5RAP3-203ENST00000577442 BCE1O60756 84 aa7.78□□□□□ -1.16
CDK5RAP3-203ENST00000577442 TIMM17BO60830 172 aa7.78□□□□□ -1.16
CDK5RAP3-203ENST00000577442 ARL17AQ8IVW1 177 aa7.78□□□□□ -1.16
CDK5RAP3-203ENST00000577442 DAND5Q8N907 189 aa7.78□□□□□ -1.16
CDK5RAP3-203ENST00000577442 IGKV2-28A0A075B6P5 120 aa7.77□□□□□ -1.17
CDK5RAP3-203ENST00000577442 IGKV2D-28P01615 120 aa7.77□□□□□ -1.17
CDK5RAP3-203ENST00000577442 ANKRD39Q53RE8 183 aa7.77□□□□□ -1.17
CDK5RAP3-203ENST00000577442 Q8NDZ9 215 aa7.77□□□□□ -1.17
CDK5RAP3-203ENST00000577442 IGLV1-50A0A075B6I6 118 aa7.76□□□□□ -1.17
CDK5RAP3-203ENST00000577442 RPL28P46779 137 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-203ENST00000577442 H0Y9J4 135 aa7.75□□□□□ -1.17
CDK5RAP3-203ENST00000577442 ZNF861PO60384 105 aa7.75□□□□□ -1.17
CDK5RAP3-203ENST00000577442 SCGB1D4Q6XE38 83 aa7.75□□□□□ -1.17
CDK5RAP3-203ENST00000577442 TRBV10-2A0A0K0K1G8 114 aa7.74□□□□□ -1.17
CDK5RAP3-203ENST00000577442 TMEM238C9JI98 176 aa7.74□□□□□ -1.17
CDK5RAP3-203ENST00000577442 NCR3O14931 201 aa7.74□□□□□ -1.17
CDK5RAP3-203ENST00000577442 NDUFC2O95298 119 aa7.74□□□□□ -1.17
CDK5RAP3-203ENST00000577442 SCGB1D1O95968 90 aa7.74□□□□□ -1.17
CDK5RAP3-203ENST00000577442 S100A12P80511 92 aa7.74□□□□□ -1.17
CDK5RAP3-203ENST00000577442 TTTY13Q9BZ97 58 aa7.74□□□□□ -1.17
CDK5RAP3-203ENST00000577442 SPANXB1Q9NS25 103 aaPredicted RBP7.74□□□□□ -1.17
CDK5RAP3-203ENST00000577442 PRYO14603 147 aa7.73□□□□□ -1.17
CDK5RAP3-203ENST00000577442 UBE2AP49459 152 aa7.73□□□□□ -1.17
CDK5RAP3-203ENST00000577442 ADAMTSL4-AS1Q5T5F5 129 aa7.73□□□□□ -1.17
CDK5RAP3-203ENST00000577442 COPS9Q8WXC6 57 aa7.73□□□□□ -1.17
CDK5RAP3-203ENST00000577442 LITAFQ99732 161 aa7.73□□□□□ -1.17
CDK5RAP3-203ENST00000577442 TMEM126AQ9H061 195 aa7.73□□□□□ -1.17
CDK5RAP3-203ENST00000577442 HERC1Q15751 4861 aa7.73□□□□□ -1.17
CDK5RAP3-203ENST00000577442 NPC2P61916 151 aa7.72□□□□□ -1.17
CDK5RAP3-203ENST00000577442 TNXBP22105 4242 aa7.71□□□□□ -1.18
CDK5RAP3-203ENST00000577442 SOSTDC1Q6X4U4 206 aa7.71□□□□□ -1.18
CDK5RAP3-203ENST00000577442 PCP2Q8IVA1 136 aa7.71□□□□□ -1.18
CDK5RAP3-203ENST00000577442 LINC00308Q8TCZ7 52 aa7.71□□□□□ -1.18
CDK5RAP3-203ENST00000577442 LINC01600Q96MT4 127 aa7.71□□□□□ -1.18
CDK5RAP3-203ENST00000577442 TRBV10-3A0A0K0K1G6 114 aa7.7□□□□□ -1.18
CDK5RAP3-203ENST00000577442 DDTP30046 118 aa7.7□□□□□ -1.18
CDK5RAP3-203ENST00000577442 Q6ZVH6 145 aa7.7□□□□□ -1.18
CDK5RAP3-203ENST00000577442 FAM19A1Q7Z5A9 133 aa7.7□□□□□ -1.18
CDK5RAP3-203ENST00000577442 SPANXDQ9BXN6 97 aa7.7□□□□□ -1.18
CDK5RAP3-203ENST00000577442 SPANXCQ9NY87 97 aa7.7□□□□□ -1.18
CDK5RAP3-203ENST00000577442 S100A7L2Q5SY68 101 aa7.69□□□□□ -1.18
CDK5RAP3-203ENST00000577442 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
CDK5RAP3-203ENST00000577442 KCNQ1DNQ9H478 68 aa7.69□□□□□ -1.18
CDK5RAP3-203ENST00000577442 CBY1Q9Y3M2 126 aa7.69□□□□□ -1.18
CDK5RAP3-203ENST00000577442 IFITM1P13164 125 aa7.68□□□□□ -1.18
CDK5RAP3-203ENST00000577442 ETDCA0A1B0GVM5 59 aa7.67□□□□□ -1.18
CDK5RAP3-203ENST00000577442 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
CDK5RAP3-203ENST00000577442 PRLHP81277 87 aa7.67□□□□□ -1.18
CDK5RAP3-203ENST00000577442 LINC00337Q8N6G1 96 aa7.67□□□□□ -1.18
CDK5RAP3-203ENST00000577442 PPDPFQ9H3Y8 114 aa7.67□□□□□ -1.18
CDK5RAP3-203ENST00000577442 TMA7Q9Y2S6 64 aaKnown RBP7.67□□□□□ -1.18
CDK5RAP3-203ENST00000577442 EIF4EBP3O60516 100 aaPredicted RBP7.66□□□□□ -1.18
CDK5RAP3-203ENST00000577442 IGLV6-57P01721 117 aa7.66□□□□□ -1.18
CDK5RAP3-203ENST00000577442 LINC00518Q8N0U6 118 aa7.66□□□□□ -1.18
CDK5RAP3-203ENST00000577442 SPRR1AP35321 89 aa7.65□□□□□ -1.18
CDK5RAP3-203ENST00000577442 JOSD1Q15040 202 aaPredicted RBP7.65□□□□□ -1.18
CDK5RAP3-203ENST00000577442 TRAV23DV6A0A075B6W5 121 aa7.64□□□□□ -1.19
CDK5RAP3-203ENST00000577442 KRTAP1-4P0C5Y4 121 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms