RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 CKS1BP61024 79 aa5.26□□□□□ -1.57
SMG6-210ENST00000572205 SPINK6Q6UWN8 80 aa5.26□□□□□ -1.57
SMG6-210ENST00000572205 HIST1H2BKO60814 126 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 IGLV7-43P04211 117 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 HIST1H2BJP06899 126 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 HIST1H2BOP23527 126 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 HIST1H2BBP33778 126 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 HIST1H2BDP58876 126 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 HIST1H2BCP62807 126 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 HIST2H2BEQ16778 126 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.25□□□□□ -1.57
SMG6-210ENST00000572205 KRTAP13-1Q8IUC0 172 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 HIST1H2BHQ93079 126 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 HIST1H2BNQ99877 126 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 HIST1H2BMQ99879 126 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 TP73-AS1Q9UF72 201 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 CHTOPQ9Y3Y2 248 aaKnown RBP5.25□□□□□ -1.57
SMG6-210ENST00000572205 C22orf24Q9Y442 160 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 LPAP08519 4548 aa5.25□□□□□ -1.57
SMG6-210ENST00000572205 H3BRM9 83 aa5.24□□□□□ -1.57
SMG6-210ENST00000572205 HSBP1O75506 76 aa5.24□□□□□ -1.57
SMG6-210ENST00000572205 C1orf137Q5JT78 98 aa5.24□□□□□ -1.57
SMG6-210ENST00000572205 GAGE2AQ6NT46 116 aa5.24□□□□□ -1.57
SMG6-210ENST00000572205 Q75L30 129 aa5.24□□□□□ -1.57
SMG6-210ENST00000572205 NDUFA6P56556 154 aa5.23□□□□□ -1.57
SMG6-210ENST00000572205 ERG28Q9UKR5 140 aa5.23□□□□□ -1.57
SMG6-210ENST00000572205 H0Y9J4 135 aa5.22□□□□□ -1.57
SMG6-210ENST00000572205 TMEM170BQ5T4T1 132 aa5.22□□□□□ -1.57
SMG6-210ENST00000572205 MRPL55Q7Z7F7 128 aaKnown RBP5.22□□□□□ -1.57
SMG6-210ENST00000572205 SND1-IT1Q9HBX3 110 aa5.22□□□□□ -1.57
SMG6-210ENST00000572205 LEPROTL1O95214 131 aa5.21□□□□□ -1.58
SMG6-210ENST00000572205 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
SMG6-210ENST00000572205 COA6Q5JTJ3 125 aaKnown RBP5.21□□□□□ -1.58
SMG6-210ENST00000572205 LINC00167Q96N53 147 aa5.21□□□□□ -1.58
SMG6-210ENST00000572205 PFN2P35080 140 aa5.2□□□□□ -1.58
SMG6-210ENST00000572205 COX17Q14061 63 aa5.2□□□□□ -1.58
SMG6-210ENST00000572205 PMCHL2Q9BQD1 86 aa5.2□□□□□ -1.58
SMG6-210ENST00000572205 PAM16Q9Y3D7 125 aa5.2□□□□□ -1.58
SMG6-210ENST00000572205 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
SMG6-210ENST00000572205 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
SMG6-210ENST00000572205 H0Y8G0 127 aa5.18□□□□□ -1.58
SMG6-210ENST00000572205 FABP4P15090 132 aa5.18□□□□□ -1.58
SMG6-210ENST00000572205 UBE2BP63146 152 aa5.18□□□□□ -1.58
SMG6-210ENST00000572205 SFTA2Q6UW10 78 aa5.18□□□□□ -1.58
SMG6-210ENST00000572205 REG3GQ6UW15 175 aa5.18□□□□□ -1.58
SMG6-210ENST00000572205 IGLV1-50A0A075B6I6 118 aa5.17□□□□□ -1.58
SMG6-210ENST00000572205 RPL37AP8A6NKH3 93 aa5.17□□□□□ -1.58
SMG6-210ENST00000572205 ZNF861PO60384 105 aa5.17□□□□□ -1.58
SMG6-210ENST00000572205 BCE1O60756 84 aa5.17□□□□□ -1.58
SMG6-210ENST00000572205 SMIM13P0DJ93 91 aa5.17□□□□□ -1.58
SMG6-210ENST00000572205 PLNP26678 52 aa5.17□□□□□ -1.58
SMG6-210ENST00000572205 LINC01545Q5VT33 79 aa5.17□□□□□ -1.58
SMG6-210ENST00000572205 DIRC1Q969H9 104 aa5.17□□□□□ -1.58
SMG6-210ENST00000572205 HSPB8Q9UJY1 196 aa5.17□□□□□ -1.58
SMG6-210ENST00000572205 LOC107984156A0A0G2JMH3 177 aa5.16□□□□□ -1.58
SMG6-210ENST00000572205 TMEM238C9JI98 176 aa5.16□□□□□ -1.58
SMG6-210ENST00000572205 SYS1-DBNDD2H3BUS1 97 aa5.16□□□□□ -1.58
SMG6-210ENST00000572205 M0R378 163 aa5.16□□□□□ -1.58
SMG6-210ENST00000572205 LEPROTO15243 131 aa5.16□□□□□ -1.58
SMG6-210ENST00000572205 DPM2O94777 84 aa5.16□□□□□ -1.58
SMG6-210ENST00000572205 ARL17AQ8IVW1 177 aa5.16□□□□□ -1.58
SMG6-210ENST00000572205 PRR26Q8N8Z3 221 aa5.16□□□□□ -1.58
SMG6-210ENST00000572205 LITAFQ99732 161 aa5.16□□□□□ -1.58
SMG6-210ENST00000572205 NDUFA12Q9UI09 145 aa5.16□□□□□ -1.58
SMG6-210ENST00000572205 IGKV2-28A0A075B6P5 120 aa5.15□□□□□ -1.59
SMG6-210ENST00000572205 A0A087X002 238 aa5.15□□□□□ -1.59
SMG6-210ENST00000572205 KRTAP4-16G5E9R7 235 aaPredicted RBP5.15□□□□□ -1.59
SMG6-210ENST00000572205 IGKV2D-28P01615 120 aa5.15□□□□□ -1.59
SMG6-210ENST00000572205 IGKCP01834 107 aa5.15□□□□□ -1.59
SMG6-210ENST00000572205 SOSTDC1Q6X4U4 206 aa5.15□□□□□ -1.59
SMG6-210ENST00000572205 MIR7-3HGQ8N6C7 128 aa5.15□□□□□ -1.59
SMG6-210ENST00000572205 TMEM126AQ9H061 195 aa5.15□□□□□ -1.59
SMG6-210ENST00000572205 IGKV2D-26A0A0A0MRZ7 120 aa5.14□□□□□ -1.59
SMG6-210ENST00000572205 A0A0U1RRA0 63 aa5.14□□□□□ -1.59
SMG6-210ENST00000572205 E9PLD3 99 aa5.14□□□□□ -1.59
SMG6-210ENST00000572205 J3QQQ9 107 aa5.14□□□□□ -1.59
SMG6-210ENST00000572205 ATP6V1G1O75348 118 aa5.14□□□□□ -1.59
SMG6-210ENST00000572205 C3orf79P0CE67 100 aa5.14□□□□□ -1.59
SMG6-210ENST00000572205 SPRR1AP35321 89 aa5.14□□□□□ -1.59
SMG6-210ENST00000572205 HERV-K104P63124 156 aa5.14□□□□□ -1.59
SMG6-210ENST00000572205 KRTAP13-2Q52LG2 175 aa5.13□□□□□ -1.59
SMG6-210ENST00000572205 DAND5Q8N907 189 aa5.13□□□□□ -1.59
SMG6-210ENST00000572205 NKAPP1Q8N9T2 125 aa5.13□□□□□ -1.59
SMG6-210ENST00000572205 A0A0J9YXY3 114 aa5.12□□□□□ -1.59
SMG6-210ENST00000572205 LINC00158P58513 81 aa5.12□□□□□ -1.59
SMG6-210ENST00000572205 PRLHP81277 87 aa5.12□□□□□ -1.59
SMG6-210ENST00000572205 ADAMTSL4-AS1Q5T5F5 129 aa5.12□□□□□ -1.59
SMG6-210ENST00000572205 PLEKHB2Q96CS7 222 aa5.12□□□□□ -1.59
SMG6-210ENST00000572205 MAP1LC3CQ9BXW4 147 aa5.12□□□□□ -1.59
SMG6-210ENST00000572205 TTTY13Q9BZ97 58 aa5.12□□□□□ -1.59
SMG6-210ENST00000572205 MYMXA0A1B0GTQ4 84 aa5.11□□□□□ -1.59
SMG6-210ENST00000572205 NMUP48645 174 aa5.11□□□□□ -1.59
SMG6-210ENST00000572205 NCR3O14931 201 aa5.1□□□□□ -1.59
SMG6-210ENST00000572205 RPL28P46779 137 aaKnown RBP5.1□□□□□ -1.59
SMG6-210ENST00000572205 RPL24P83731 157 aaKnown RBP5.1□□□□□ -1.59
SMG6-210ENST00000572205 MEIG1Q5JSS6 88 aa5.1□□□□□ -1.59
SMG6-210ENST00000572205 XP32Q5T750 250 aa5.1□□□□□ -1.59
SMG6-210ENST00000572205 BOD1L2Q8IYS8 172 aa5.1□□□□□ -1.59
SMG6-210ENST00000572205 KCNQ1DNQ9H478 68 aa5.1□□□□□ -1.59
SMG6-210ENST00000572205 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms