RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 MANBALQ9NQG1 85 aa3.3□□□□□ -1.88
UBFD1-209ENST00000569919 A8MWL6 223 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 TCAPO15273 167 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 PDE6DO43924 150 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 RAB4AP20338 218 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 CEBPGP53567 150 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 MRPS36P82909 103 aaKnown RBP3.29□□□□□ -1.88
UBFD1-209ENST00000569919 DAND5Q8N907 189 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 BORCS7Q96B45 105 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 LINC00167Q96N53 147 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 TMEM191AQ9H0A3 160 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 SPANXA1Q9NS26 97 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 MED9Q9NWA0 146 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 GNG13Q9P2W3 67 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 MUC17Q685J3 4493 aa3.29□□□□□ -1.88
UBFD1-209ENST00000569919 TRBV20OR9-2A0A075B6H5 130 aa3.28□□□□□ -1.88
UBFD1-209ENST00000569919 SMKR1H3BMG3 65 aa3.28□□□□□ -1.88
UBFD1-209ENST00000569919 GATCO43716 136 aaKnown RBP3.28□□□□□ -1.88
UBFD1-209ENST00000569919 CKS1BP61024 79 aa3.28□□□□□ -1.88
UBFD1-209ENST00000569919 HBBP68871 147 aa3.28□□□□□ -1.88
UBFD1-209ENST00000569919 KRTAP19-2Q3LHN2 52 aa3.28□□□□□ -1.88
UBFD1-209ENST00000569919 COX19Q49B96 90 aa3.28□□□□□ -1.88
UBFD1-209ENST00000569919 KRTAP13-1Q8IUC0 172 aa3.28□□□□□ -1.88
UBFD1-209ENST00000569919 XAGE1AQ9HD64 81 aa3.28□□□□□ -1.88
UBFD1-209ENST00000569919 NDUFA12Q9UI09 145 aa3.28□□□□□ -1.88
UBFD1-209ENST00000569919 M0R2T5 61 aa3.27□□□□□ -1.89
UBFD1-209ENST00000569919 SPINK1P00995 79 aa3.27□□□□□ -1.89
UBFD1-209ENST00000569919 FAM19A1Q7Z5A9 133 aa3.27□□□□□ -1.89
UBFD1-209ENST00000569919 C3orf22Q8N5N4 141 aa3.27□□□□□ -1.89
UBFD1-209ENST00000569919 FAM104AQ969W3 186 aa3.27□□□□□ -1.89
UBFD1-209ENST00000569919 A0A1B0GUT8 65 aa3.26□□□□□ -1.89
UBFD1-209ENST00000569919 ARPC5O15511 151 aa3.26□□□□□ -1.89
UBFD1-209ENST00000569919 NMUP48645 174 aa3.26□□□□□ -1.89
UBFD1-209ENST00000569919 RPL39P62891 51 aaKnown RBP3.26□□□□□ -1.89
UBFD1-209ENST00000569919 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
UBFD1-209ENST00000569919 CBLN2Q8IUK8 224 aa3.26□□□□□ -1.89
UBFD1-209ENST00000569919 AMN1Q8IY45 258 aa3.26□□□□□ -1.89
UBFD1-209ENST00000569919 PLEKHB2Q96CS7 222 aa3.26□□□□□ -1.89
UBFD1-209ENST00000569919 C20orf78Q9BR46 151 aa3.26□□□□□ -1.89
UBFD1-209ENST00000569919 GNB1LQ9BYB4 327 aa3.26□□□□□ -1.89
UBFD1-209ENST00000569919 COA6Q5JTJ3 125 aaKnown RBP3.25□□□□□ -1.89
UBFD1-209ENST00000569919 FAM231DQ6ZW35 169 aa3.25□□□□□ -1.89
UBFD1-209ENST00000569919 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
UBFD1-209ENST00000569919 Q8IZM0 81 aa3.25□□□□□ -1.89
UBFD1-209ENST00000569919 FAM19A2Q8N3H0 131 aa3.25□□□□□ -1.89
UBFD1-209ENST00000569919 TOMM7Q9P0U1 55 aa3.25□□□□□ -1.89
UBFD1-209ENST00000569919 TRBV24-1A0A075B6N3 115 aa3.24□□□□□ -1.89
UBFD1-209ENST00000569919 LINC00862A6NCI5 91 aa3.24□□□□□ -1.89
UBFD1-209ENST00000569919 A6NDN8 102 aa3.24□□□□□ -1.89
UBFD1-209ENST00000569919 F8VRH5 84 aa3.24□□□□□ -1.89
UBFD1-209ENST00000569919 RAB5AP20339 215 aa3.24□□□□□ -1.89
UBFD1-209ENST00000569919 IFI27P40305 119 aaPredicted RBP3.24□□□□□ -1.89
UBFD1-209ENST00000569919 HIGD1CA8MV81 97 aa3.23□□□□□ -1.89
UBFD1-209ENST00000569919 PRLHP81277 87 aa3.23□□□□□ -1.89
UBFD1-209ENST00000569919 ZNF345Q14585 488 aa3.23□□□□□ -1.89
UBFD1-209ENST00000569919 TEX43Q6ZNM6 134 aa3.23□□□□□ -1.89
UBFD1-209ENST00000569919 AKAP14Q86UN6 197 aa3.23□□□□□ -1.89
UBFD1-209ENST00000569919 IGKV2-28A0A075B6P5 120 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 KANTRA0A1W2PQU2 76 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 SLC25A20O43772 301 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 IGKV2D-28P01615 120 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 CKS2P33552 79 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 CXCL5P42830 114 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 RAB14P61106 215 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 RPS29P62273 56 aaKnown RBP3.22□□□□□ -1.89
UBFD1-209ENST00000569919 CD164Q04900 197 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 PDZD11Q5EBL8 140 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 FAM104BQ5XKR9 115 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 TMEM141Q96I45 108 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 C2orf88Q9BSF0 95 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 TMEM126AQ9H061 195 aa3.22□□□□□ -1.89
UBFD1-209ENST00000569919 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
UBFD1-209ENST00000569919 SEC11AP67812 179 aa3.21□□□□□ -1.9
UBFD1-209ENST00000569919 MRPL51Q4U2R6 128 aaKnown RBP3.21□□□□□ -1.9
UBFD1-209ENST00000569919 PCOTHQ58A44 107 aa3.21□□□□□ -1.9
UBFD1-209ENST00000569919 LINC01551Q86U37 167 aa3.21□□□□□ -1.9
UBFD1-209ENST00000569919 SPRR4Q96PI1 79 aa3.21□□□□□ -1.9
UBFD1-209ENST00000569919 SMIM2Q9BVW6 85 aa3.21□□□□□ -1.9
UBFD1-209ENST00000569919 EIF5A2Q9GZV4 153 aaKnown RBP3.21□□□□□ -1.9
UBFD1-209ENST00000569919 ZNF706Q9Y5V0 76 aaPredicted RBP3.21□□□□□ -1.9
UBFD1-209ENST00000569919 HMSDA8MTL9 139 aa3.2□□□□□ -1.9
UBFD1-209ENST00000569919 COX6B2Q6YFQ2 88 aa3.2□□□□□ -1.9
UBFD1-209ENST00000569919 SSBP3-AS1Q7Z2R9 100 aa3.2□□□□□ -1.9
UBFD1-209ENST00000569919 FAM19A3Q7Z5A8 133 aa3.2□□□□□ -1.9
UBFD1-209ENST00000569919 HIGD2AQ9BW72 106 aa3.2□□□□□ -1.9
UBFD1-209ENST00000569919 TMEM238C9JI98 176 aa3.19□□□□□ -1.9
UBFD1-209ENST00000569919 TMEM250H0YL14 139 aa3.19□□□□□ -1.9
UBFD1-209ENST00000569919 M0R378 163 aa3.19□□□□□ -1.9
UBFD1-209ENST00000569919 PPBPP02775 128 aa3.19□□□□□ -1.9
UBFD1-209ENST00000569919 RAB5BP61020 215 aa3.19□□□□□ -1.9
UBFD1-209ENST00000569919 HERVK_113P63121 156 aa3.19□□□□□ -1.9
UBFD1-209ENST00000569919 AMELXQ99217 191 aa3.19□□□□□ -1.9
UBFD1-209ENST00000569919 OSTCQ9NRP0 149 aa3.19□□□□□ -1.9
UBFD1-209ENST00000569919 SPANXB1Q9NS25 103 aaPredicted RBP3.19□□□□□ -1.9
UBFD1-209ENST00000569919 SCO1O75880 301 aa3.18□□□□□ -1.9
UBFD1-209ENST00000569919 Q8N9L7 120 aa3.18□□□□□ -1.9
UBFD1-209ENST00000569919 CDKN2A-AS1Q9UH64 79 aa3.18□□□□□ -1.9
UBFD1-209ENST00000569919 NAT8BQ9UHF3 227 aa3.18□□□□□ -1.9
UBFD1-209ENST00000569919 D6R8Y8 96 aa3.17□□□□□ -1.9
UBFD1-209ENST00000569919 F8W036 122 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms