RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 C2orf48Q96LS8 159 aa4.5□□□□□ -1.69
CNOT1-218ENST00000569732 HIST1H2BLQ99880 126 aa4.5□□□□□ -1.69
CNOT1-218ENST00000569732 GEMIN7Q9H840 131 aaKnown RBP4.5□□□□□ -1.69
CNOT1-218ENST00000569732 TMEM223A0PJW6 202 aa4.49□□□□□ -1.69
CNOT1-218ENST00000569732 SYS1-DBNDD2H3BUS1 97 aa4.49□□□□□ -1.69
CNOT1-218ENST00000569732 SPINK8P0C7L1 97 aa4.49□□□□□ -1.69
CNOT1-218ENST00000569732 C3orf79P0CE67 100 aa4.49□□□□□ -1.69
CNOT1-218ENST00000569732 LINC01545Q5VT33 79 aa4.49□□□□□ -1.69
CNOT1-218ENST00000569732 SDIM1Q6ZPB5 146 aa4.49□□□□□ -1.69
CNOT1-218ENST00000569732 Q8IZM0 81 aa4.49□□□□□ -1.69
CNOT1-218ENST00000569732 PMCHL2Q9BQD1 86 aa4.49□□□□□ -1.69
CNOT1-218ENST00000569732 F8WDY8 70 aa4.48□□□□□ -1.69
CNOT1-218ENST00000569732 H0Y8G0 127 aa4.48□□□□□ -1.69
CNOT1-218ENST00000569732 PANO1I0J062 215 aa4.48□□□□□ -1.69
CNOT1-218ENST00000569732 SYCNQ0VAF6 134 aa4.48□□□□□ -1.69
CNOT1-218ENST00000569732 UNQ6190/PRO20217Q6UXQ8 127 aa4.48□□□□□ -1.69
CNOT1-218ENST00000569732 MAP1LC3CQ9BXW4 147 aa4.48□□□□□ -1.69
CNOT1-218ENST00000569732 C6orf48Q9UBA6 75 aa4.48□□□□□ -1.69
CNOT1-218ENST00000569732 H3BRM9 83 aa4.47□□□□□ -1.69
CNOT1-218ENST00000569732 DPM2O94777 84 aa4.47□□□□□ -1.69
CNOT1-218ENST00000569732 PLNP26678 52 aa4.47□□□□□ -1.69
CNOT1-218ENST00000569732 CIRBPQ14011 172 aaKnown RBP4.47□□□□□ -1.69
CNOT1-218ENST00000569732 C2orf82Q6UX34 121 aa4.47□□□□□ -1.69
CNOT1-218ENST00000569732 SMIM29Q86T20 159 aa4.47□□□□□ -1.69
CNOT1-218ENST00000569732 COX7B2Q8TF08 81 aa4.47□□□□□ -1.69
CNOT1-218ENST00000569732 CARD19Q96LW7 228 aa4.47□□□□□ -1.69
CNOT1-218ENST00000569732 CAMK2N2Q96S95 79 aa4.47□□□□□ -1.69
CNOT1-218ENST00000569732 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-218ENST00000569732 NDUFA1O15239 70 aa4.46□□□□□ -1.7
CNOT1-218ENST00000569732 IGKCP01834 107 aa4.46□□□□□ -1.7
CNOT1-218ENST00000569732 S100A6P06703 90 aa4.46□□□□□ -1.7
CNOT1-218ENST00000569732 TSPEAR-AS2P59090 65 aa4.46□□□□□ -1.7
CNOT1-218ENST00000569732 KRTDAPP60985 99 aa4.46□□□□□ -1.7
CNOT1-218ENST00000569732 TMEM170BQ5T4T1 132 aa4.46□□□□□ -1.7
CNOT1-218ENST00000569732 ZNF625Q96I27 306 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-218ENST00000569732 A0A096LNI7 61 aa4.45□□□□□ -1.7
CNOT1-218ENST00000569732 TRBV30A0A0K0K1B3 111 aa4.45□□□□□ -1.7
CNOT1-218ENST00000569732 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
CNOT1-218ENST00000569732 LINC01547P58512 204 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-218ENST00000569732 C9orf116Q5BN46 136 aaPredicted RBP4.45□□□□□ -1.7
CNOT1-218ENST00000569732 C6orf226Q5I0X4 101 aa4.45□□□□□ -1.7
CNOT1-218ENST00000569732 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
CNOT1-218ENST00000569732 LINC01600Q96MT4 127 aa4.45□□□□□ -1.7
CNOT1-218ENST00000569732 TOMM7Q9P0U1 55 aa4.45□□□□□ -1.7
CNOT1-218ENST00000569732 CHTF8P0CG12 524 aa4.44□□□□□ -1.7
CNOT1-218ENST00000569732 S100A2P29034 98 aa4.44□□□□□ -1.7
CNOT1-218ENST00000569732 CXCL5P42830 114 aa4.44□□□□□ -1.7
CNOT1-218ENST00000569732 Q6ZRP5 223 aa4.44□□□□□ -1.7
CNOT1-218ENST00000569732 LOC107984640A0A0U1RRK4 108 aa4.43□□□□□ -1.7
CNOT1-218ENST00000569732 LEPROTO15243 131 aa4.43□□□□□ -1.7
CNOT1-218ENST00000569732 CKS1BP61024 79 aa4.43□□□□□ -1.7
CNOT1-218ENST00000569732 IGKV2D-26A0A0A0MRZ7 120 aa4.42□□□□□ -1.7
CNOT1-218ENST00000569732 E9PLD3 99 aa4.42□□□□□ -1.7
CNOT1-218ENST00000569732 NDUFC2-KCTD14E9PQ53 114 aa4.42□□□□□ -1.7
CNOT1-218ENST00000569732 KRTAP7-1Q8IUC3 87 aa4.42□□□□□ -1.7
CNOT1-218ENST00000569732 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
CNOT1-218ENST00000569732 IGKV2-24A0A0C4DH68 120 aa4.41□□□□□ -1.7
CNOT1-218ENST00000569732 C20orf202A1L168 122 aa4.41□□□□□ -1.7
CNOT1-218ENST00000569732 J3QQQ9 107 aa4.41□□□□□ -1.7
CNOT1-218ENST00000569732 C9orf129Q5T035 196 aaKnown RBP4.41□□□□□ -1.7
CNOT1-218ENST00000569732 ATOH7Q8N100 152 aa4.41□□□□□ -1.7
CNOT1-218ENST00000569732 PLEKHB2Q96CS7 222 aa4.41□□□□□ -1.7
CNOT1-218ENST00000569732 PLAC8Q9NZF1 115 aa4.41□□□□□ -1.7
CNOT1-218ENST00000569732 LPAP08519 4548 aa4.41□□□□□ -1.7
CNOT1-218ENST00000569732 MUC2Q02817 5179 aa4.4□□□□□ -1.7
CNOT1-218ENST00000569732 A0A087WYN8 130 aa4.4□□□□□ -1.71
CNOT1-218ENST00000569732 A0A1W2PNN7 141 aa4.4□□□□□ -1.71
CNOT1-218ENST00000569732 KRTAP10-8P60410 259 aa4.4□□□□□ -1.71
CNOT1-218ENST00000569732 HERVK_113P61574 105 aa4.4□□□□□ -1.71
CNOT1-218ENST00000569732 RPL18AQ02543 176 aaKnown RBP4.4□□□□□ -1.71
CNOT1-218ENST00000569732 MAJINQ3KP22 176 aa4.4□□□□□ -1.71
CNOT1-218ENST00000569732 SFTA2Q6UW10 78 aa4.4□□□□□ -1.71
CNOT1-218ENST00000569732 DPH3Q96FX2 82 aa4.4□□□□□ -1.71
CNOT1-218ENST00000569732 NDUFA12Q9UI09 145 aa4.4□□□□□ -1.71
CNOT1-218ENST00000569732 ERG28Q9UKR5 140 aa4.4□□□□□ -1.71
CNOT1-218ENST00000569732 PKIGQ9Y2B9 76 aa4.4□□□□□ -1.71
CNOT1-218ENST00000569732 FAM168BA1KXE4 195 aa4.39□□□□□ -1.71
CNOT1-218ENST00000569732 NMUP48645 174 aa4.39□□□□□ -1.71
CNOT1-218ENST00000569732 AKR1D1P51857 326 aa4.39□□□□□ -1.71
CNOT1-218ENST00000569732 SRSF9Q13242 221 aaKnown RBP eCLIP4.39□□□□□ -1.71
CNOT1-218ENST00000569732 REG3GQ6UW15 175 aa4.39□□□□□ -1.71
CNOT1-218ENST00000569732 TTTY13Q9BZ97 58 aa4.39□□□□□ -1.71
CNOT1-218ENST00000569732 LINC00474Q9P2X8 69 aa4.39□□□□□ -1.71
CNOT1-218ENST00000569732 MYMXA0A1B0GTQ4 84 aa4.38□□□□□ -1.71
CNOT1-218ENST00000569732 LGALS3P17931 250 aaKnown RBP4.38□□□□□ -1.71
CNOT1-218ENST00000569732 HERV-K104P63124 156 aa4.38□□□□□ -1.71
CNOT1-218ENST00000569732 PRR3P79522 188 aaKnown RBP4.38□□□□□ -1.71
CNOT1-218ENST00000569732 COX17Q14061 63 aa4.38□□□□□ -1.71
CNOT1-218ENST00000569732 JOSD1Q15040 202 aaPredicted RBP4.38□□□□□ -1.71
CNOT1-218ENST00000569732 SPINK6Q6UWN8 80 aa4.38□□□□□ -1.71
CNOT1-218ENST00000569732 Q8NDZ9 215 aa4.38□□□□□ -1.71
CNOT1-218ENST00000569732 PRAC1Q96KF2 57 aa4.38□□□□□ -1.71
CNOT1-218ENST00000569732 LITAFQ99732 161 aa4.38□□□□□ -1.71
CNOT1-218ENST00000569732 XAGE1AQ9HD64 81 aa4.38□□□□□ -1.71
CNOT1-218ENST00000569732 A0A0J9YXY3 114 aa4.37□□□□□ -1.71
CNOT1-218ENST00000569732 A0A0U1RQV1 116 aa4.37□□□□□ -1.71
CNOT1-218ENST00000569732 SMIM13P0DJ93 91 aa4.37□□□□□ -1.71
CNOT1-218ENST00000569732 PFN2P35080 140 aa4.37□□□□□ -1.71
CNOT1-218ENST00000569732 PYY3Q5JQD4 70 aa4.37□□□□□ -1.71
CNOT1-218ENST00000569732 PCP2Q8IVA1 136 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms