RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 IGLV5-45A0A087WSX0 123 aa7.16□□□□□ -1.26
SNX29-207ENST00000568949 COLCA2A8K830 154 aa7.16□□□□□ -1.26
SNX29-207ENST00000568949 SFTA2Q6UW10 78 aa7.16□□□□□ -1.26
SNX29-207ENST00000568949 LINC00167Q96N53 147 aa7.16□□□□□ -1.26
SNX29-207ENST00000568949 CDKN2A-AS1Q9UH64 79 aa7.16□□□□□ -1.26
SNX29-207ENST00000568949 IGKV2D-26A0A0A0MRZ7 120 aa7.15□□□□□ -1.26
SNX29-207ENST00000568949 URB1-AS1Q96HZ7 61 aa7.15□□□□□ -1.26
SNX29-207ENST00000568949 TOMM7Q9P0U1 55 aa7.15□□□□□ -1.26
SNX29-207ENST00000568949 A0A096LNJ9 63 aa7.14□□□□□ -1.27
SNX29-207ENST00000568949 TRAV12-1A0A0B4J245 112 aa7.14□□□□□ -1.27
SNX29-207ENST00000568949 RPL37AP8A6NKH3 93 aa7.14□□□□□ -1.27
SNX29-207ENST00000568949 F8VRH5 84 aa7.14□□□□□ -1.27
SNX29-207ENST00000568949 IGLC3P0DOY3 106 aa7.14□□□□□ -1.27
SNX29-207ENST00000568949 UBE2AP49459 152 aa7.14□□□□□ -1.27
SNX29-207ENST00000568949 ASB16-AS1Q495Z4 193 aa7.14□□□□□ -1.27
SNX29-207ENST00000568949 ZC2HC1BQ5TFG8 222 aa7.14□□□□□ -1.27
SNX29-207ENST00000568949 LEPROTL1O95214 131 aa7.13□□□□□ -1.27
SNX29-207ENST00000568949 S100A1P23297 94 aa7.13□□□□□ -1.27
SNX29-207ENST00000568949 FP248Q71RG6 208 aaPredicted RBP7.13□□□□□ -1.27
SNX29-207ENST00000568949 IFI27L1Q96BM0 104 aa7.13□□□□□ -1.27
SNX29-207ENST00000568949 HSPB8Q9UJY1 196 aa7.13□□□□□ -1.27
SNX29-207ENST00000568949 SMIM1B2RUZ4 78 aa7.12□□□□□ -1.27
SNX29-207ENST00000568949 PMCHL1Q16048 86 aa7.12□□□□□ -1.27
SNX29-207ENST00000568949 COX7B2Q8TF08 81 aa7.12□□□□□ -1.27
SNX29-207ENST00000568949 CHTOPQ9Y3Y2 248 aaKnown RBP7.12□□□□□ -1.27
SNX29-207ENST00000568949 LINC00337Q8N6G1 96 aa7.11□□□□□ -1.27
SNX29-207ENST00000568949 IGLV5-37A0A075B6J1 123 aa7.1□□□□□ -1.27
SNX29-207ENST00000568949 GAGE10A6NGK3 116 aa7.1□□□□□ -1.27
SNX29-207ENST00000568949 SERF1AO75920 110 aa7.1□□□□□ -1.27
SNX29-207ENST00000568949 TMEM170BQ5T4T1 132 aa7.1□□□□□ -1.27
SNX29-207ENST00000568949 SPAG11AQ6PDA7 123 aa7.1□□□□□ -1.27
SNX29-207ENST00000568949 KRTAP13-3Q3SY46 172 aa7.09□□□□□ -1.27
SNX29-207ENST00000568949 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
SNX29-207ENST00000568949 SPINK8P0C7L1 97 aa7.08□□□□□ -1.28
SNX29-207ENST00000568949 ZNF22P17026 224 aaPredicted RBP7.08□□□□□ -1.28
SNX29-207ENST00000568949 PLNP26678 52 aa7.08□□□□□ -1.28
SNX29-207ENST00000568949 SEC61BP60468 96 aaKnown RBP7.08□□□□□ -1.28
SNX29-207ENST00000568949 FAM19A2Q8N3H0 131 aa7.08□□□□□ -1.28
SNX29-207ENST00000568949 IGLV5-39A0A0G2JS06 123 aa7.07□□□□□ -1.28
SNX29-207ENST00000568949 LINC00587B1AMM8 73 aa7.07□□□□□ -1.28
SNX29-207ENST00000568949 COX17Q14061 63 aa7.07□□□□□ -1.28
SNX29-207ENST00000568949 NKAPP1Q8N9T2 125 aa7.07□□□□□ -1.28
SNX29-207ENST00000568949 MAP1LC3CQ9BXW4 147 aa7.07□□□□□ -1.28
SNX29-207ENST00000568949 C11orf86A6NJI1 115 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST1H2BKO60814 126 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 SCO1O75880 301 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST1H2BJP06899 126 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST1H2BOP23527 126 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST1H2BBP33778 126 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST1H2BDP58876 126 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST1H2BCP62807 126 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 PRLHP81277 87 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST2H2BEQ16778 126 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.05□□□□□ -1.28
SNX29-207ENST00000568949 C3orf22Q8N5N4 141 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST1H2BHQ93079 126 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST1H2BNQ99877 126 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 HIST1H2BMQ99879 126 aa7.05□□□□□ -1.28
SNX29-207ENST00000568949 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
SNX29-207ENST00000568949 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
SNX29-207ENST00000568949 FABP4P15090 132 aa7.04□□□□□ -1.28
SNX29-207ENST00000568949 AKR1D1P51857 326 aa7.04□□□□□ -1.28
SNX29-207ENST00000568949 HERVK_113P61574 105 aa7.04□□□□□ -1.28
SNX29-207ENST00000568949 PLEKHB2Q96CS7 222 aa7.04□□□□□ -1.28
SNX29-207ENST00000568949 TMEM223A0PJW6 202 aa7.03□□□□□ -1.28
SNX29-207ENST00000568949 H0Y8G0 127 aa7.03□□□□□ -1.28
SNX29-207ENST00000568949 DPM2O94777 84 aa7.03□□□□□ -1.28
SNX29-207ENST00000568949 HERV-K104P63124 156 aa7.03□□□□□ -1.28
SNX29-207ENST00000568949 FAM19A1Q7Z5A9 133 aa7.03□□□□□ -1.28
SNX29-207ENST00000568949 TMEM126AQ9H061 195 aa7.02□□□□□ -1.29
SNX29-207ENST00000568949 ATP6V1G1O75348 118 aa7.01□□□□□ -1.29
SNX29-207ENST00000568949 IGKCP01834 107 aa7.01□□□□□ -1.29
SNX29-207ENST00000568949 LINC00310P59036 64 aa7.01□□□□□ -1.29
SNX29-207ENST00000568949 COA6Q5JTJ3 125 aaKnown RBP7.01□□□□□ -1.29
SNX29-207ENST00000568949 ERG28Q9UKR5 140 aa7.01□□□□□ -1.29
SNX29-207ENST00000568949 RPL24P83731 157 aaKnown RBP7□□□□□ -1.29
SNX29-207ENST00000568949 LCE2CQ5TA81 110 aa7□□□□□ -1.29
SNX29-207ENST00000568949 MYMXA0A1B0GTQ4 84 aa6.99□□□□□ -1.29
SNX29-207ENST00000568949 TMEM238C9JI98 176 aa6.99□□□□□ -1.29
SNX29-207ENST00000568949 M0R378 163 aa6.99□□□□□ -1.29
SNX29-207ENST00000568949 NMUP48645 174 aa6.99□□□□□ -1.29
SNX29-207ENST00000568949 PET117Q6UWS5 81 aa6.99□□□□□ -1.29
SNX29-207ENST00000568949 C20orf202A1L168 122 aa6.98□□□□□ -1.29
SNX29-207ENST00000568949 SYS1-DBNDD2H3BUS1 97 aa6.98□□□□□ -1.29
SNX29-207ENST00000568949 SPINK1P00995 79 aa6.98□□□□□ -1.29
SNX29-207ENST00000568949 CFC1BP0CG36 223 aa6.98□□□□□ -1.29
SNX29-207ENST00000568949 PFN2P35080 140 aa6.98□□□□□ -1.29
SNX29-207ENST00000568949 ZNF625Q96I27 306 aaPredicted RBP6.98□□□□□ -1.29
SNX29-207ENST00000568949 SPRR4Q96PI1 79 aa6.98□□□□□ -1.29
SNX29-207ENST00000568949 LEPROTO15243 131 aa6.97□□□□□ -1.29
SNX29-207ENST00000568949 VPREB1P12018 145 aa6.97□□□□□ -1.29
SNX29-207ENST00000568949 LINC00158P58513 81 aa6.97□□□□□ -1.29
SNX29-207ENST00000568949 MEIG1Q5JSS6 88 aa6.97□□□□□ -1.29
SNX29-207ENST00000568949 Q8NBF4 154 aa6.97□□□□□ -1.29
SNX29-207ENST00000568949 LGALS3P17931 250 aaKnown RBP6.96□□□□□ -1.3
SNX29-207ENST00000568949 DAND5Q8N907 189 aa6.96□□□□□ -1.3
SNX29-207ENST00000568949 HIGD2AQ9BW72 106 aa6.96□□□□□ -1.3
SNX29-207ENST00000568949 NDUFA12Q9UI09 145 aa6.96□□□□□ -1.3
SNX29-207ENST00000568949 ZNF706Q9Y5V0 76 aaPredicted RBP6.96□□□□□ -1.3
SNX29-207ENST00000568949 J3QQQ9 107 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms