RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 SPINK8P0C7L1 97 aa9□□□□□ -0.97
HERPUD1-215ENST00000568676 VPREB1P12018 145 aa9□□□□□ -0.97
HERPUD1-215ENST00000568676 COX17Q14061 63 aa9□□□□□ -0.97
HERPUD1-215ENST00000568676 LINC00337Q8N6G1 96 aa9□□□□□ -0.97
HERPUD1-215ENST00000568676 LINC01547P58512 204 aaPredicted RBP8.99□□□□□ -0.97
HERPUD1-215ENST00000568676 PMVKQ15126 192 aa8.99□□□□□ -0.97
HERPUD1-215ENST00000568676 C4orf48Q5BLP8 95 aa8.99□□□□□ -0.97
HERPUD1-215ENST00000568676 C18orf32Q8TCD1 76 aa8.99□□□□□ -0.97
HERPUD1-215ENST00000568676 M0R378 163 aa8.98□□□□□ -0.97
HERPUD1-215ENST00000568676 SCO1O75880 301 aa8.98□□□□□ -0.97
HERPUD1-215ENST00000568676 PFN2P35080 140 aa8.98□□□□□ -0.97
HERPUD1-215ENST00000568676 ASB16-AS1Q495Z4 193 aa8.98□□□□□ -0.97
HERPUD1-215ENST00000568676 TMEM238C9JI98 176 aa8.97□□□□□ -0.97
HERPUD1-215ENST00000568676 LINC00614P0C842 121 aa8.97□□□□□ -0.97
HERPUD1-215ENST00000568676 SFTA2Q6UW10 78 aa8.97□□□□□ -0.97
HERPUD1-215ENST00000568676 C3orf22Q8N5N4 141 aa8.97□□□□□ -0.97
HERPUD1-215ENST00000568676 SND1-IT1Q9HBX3 110 aa8.97□□□□□ -0.97
HERPUD1-215ENST00000568676 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
HERPUD1-215ENST00000568676 ERG28Q9UKR5 140 aa8.96□□□□□ -0.98
HERPUD1-215ENST00000568676 IGLV5-39A0A0G2JS06 123 aa8.95□□□□□ -0.98
HERPUD1-215ENST00000568676 HIGD2AQ9BW72 106 aa8.95□□□□□ -0.98
HERPUD1-215ENST00000568676 SEC61BP60468 96 aaKnown RBP8.94□□□□□ -0.98
HERPUD1-215ENST00000568676 KRTAP13-3Q3SY46 172 aa8.94□□□□□ -0.98
HERPUD1-215ENST00000568676 SPRR4Q96PI1 79 aa8.94□□□□□ -0.98
HERPUD1-215ENST00000568676 HBDP02042 147 aa8.93□□□□□ -0.98
HERPUD1-215ENST00000568676 SPINK1P00995 79 aa8.92□□□□□ -0.98
HERPUD1-215ENST00000568676 TRGC2P03986 189 aa8.92□□□□□ -0.98
HERPUD1-215ENST00000568676 IGLC3P0DOY3 106 aa8.92□□□□□ -0.98
HERPUD1-215ENST00000568676 CHCHD1Q96BP2 118 aaKnown RBP8.92□□□□□ -0.98
HERPUD1-215ENST00000568676 URB1-AS1Q96HZ7 61 aa8.91□□□□□ -0.98
HERPUD1-215ENST00000568676 COLCA2A8K830 154 aa8.9□□□□□ -0.98
HERPUD1-215ENST00000568676 BAGE3Q86Y29 109 aa8.9□□□□□ -0.98
HERPUD1-215ENST00000568676 NDUFA12Q9UI09 145 aa8.9□□□□□ -0.98
HERPUD1-215ENST00000568676 A0A096LNJ9 63 aa8.88□□□□□ -0.99
HERPUD1-215ENST00000568676 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
HERPUD1-215ENST00000568676 PMCHL1Q16048 86 aa8.88□□□□□ -0.99
HERPUD1-215ENST00000568676 FAM19A2Q8N3H0 131 aa8.88□□□□□ -0.99
HERPUD1-215ENST00000568676 Q8NBF4 154 aa8.88□□□□□ -0.99
HERPUD1-215ENST00000568676 HSBP1O75506 76 aa8.87□□□□□ -0.99
HERPUD1-215ENST00000568676 NDUFA6P56556 154 aa8.87□□□□□ -0.99
HERPUD1-215ENST00000568676 RPS29P62273 56 aaKnown RBP8.87□□□□□ -0.99
HERPUD1-215ENST00000568676 Q8NDZ9 215 aa8.87□□□□□ -0.99
HERPUD1-215ENST00000568676 PRYO14603 147 aa8.86□□□□□ -0.99
HERPUD1-215ENST00000568676 DAND5Q8N907 189 aa8.86□□□□□ -0.99
HERPUD1-215ENST00000568676 ZNF625Q96I27 306 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-215ENST00000568676 CRCT1Q9UGL9 99 aa8.84□□□□□ -0.99
HERPUD1-215ENST00000568676 LINC00158P58513 81 aa8.83□□□□□ -1
HERPUD1-215ENST00000568676 LINC00483Q53H64 154 aa8.83□□□□□ -1
HERPUD1-215ENST00000568676 S100A1P23297 94 aa8.82□□□□□ -1
HERPUD1-215ENST00000568676 SPRR1AP35321 89 aa8.82□□□□□ -1
HERPUD1-215ENST00000568676 IFI27L1Q96BM0 104 aa8.82□□□□□ -1
HERPUD1-215ENST00000568676 KRTAP4-1Q9BYQ7 146 aa8.82□□□□□ -1
HERPUD1-215ENST00000568676 KCNQ1DNQ9H478 68 aa8.82□□□□□ -1
HERPUD1-215ENST00000568676 SERF1AO75920 110 aa8.81□□□□□ -1
HERPUD1-215ENST00000568676 TMEM170BQ5T4T1 132 aa8.81□□□□□ -1
HERPUD1-215ENST00000568676 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
HERPUD1-215ENST00000568676 SMCR5Q8TEV8 140 aa8.81□□□□□ -1
HERPUD1-215ENST00000568676 TRAV12-1A0A0B4J245 112 aa8.8□□□□□ -1
HERPUD1-215ENST00000568676 ETDCA0A1B0GVM5 59 aa8.8□□□□□ -1
HERPUD1-215ENST00000568676 LEPROTL1O95214 131 aa8.8□□□□□ -1
HERPUD1-215ENST00000568676 S100A12P80511 92 aa8.8□□□□□ -1
HERPUD1-215ENST00000568676 CHTOPQ9Y3Y2 248 aaKnown RBP8.8□□□□□ -1
HERPUD1-215ENST00000568676 C11orf86A6NJI1 115 aa8.79□□□□□ -1
HERPUD1-215ENST00000568676 SLC25A20O43772 301 aa8.79□□□□□ -1
HERPUD1-215ENST00000568676 ATP6V1G1O75348 118 aa8.79□□□□□ -1
HERPUD1-215ENST00000568676 XP32Q5T750 250 aa8.79□□□□□ -1
HERPUD1-215ENST00000568676 Q8N377 158 aa8.79□□□□□ -1
HERPUD1-215ENST00000568676 HSPB8Q9UJY1 196 aa8.79□□□□□ -1
HERPUD1-215ENST00000568676 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
HERPUD1-215ENST00000568676 BOD1L2Q8IYS8 172 aa8.78□□□□□ -1
HERPUD1-215ENST00000568676 LINC00587B1AMM8 73 aa8.77□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST1H2BKO60814 126 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST1H2BJP06899 126 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST1H2BOP23527 126 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST1H2BBP33778 126 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST1H2BDP58876 126 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 LINC00310P59036 64 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST1H2BCP62807 126 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST2H2BEQ16778 126 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST1H2BHQ93079 126 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST1H2BNQ99877 126 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 HIST1H2BMQ99879 126 aa8.76□□□□□ -1.01
HERPUD1-215ENST00000568676 MOBPQ13875 183 aa8.75□□□□□ -1.01
HERPUD1-215ENST00000568676 GAGE2AQ6NT46 116 aa8.75□□□□□ -1.01
HERPUD1-215ENST00000568676 A0A0U1RRA0 63 aa8.74□□□□□ -1.01
HERPUD1-215ENST00000568676 HERV-K104P63124 156 aa8.74□□□□□ -1.01
HERPUD1-215ENST00000568676 IGLV9-49A0A0B4J1Y8 123 aa8.73□□□□□ -1.01
HERPUD1-215ENST00000568676 H0Y8G0 127 aa8.73□□□□□ -1.01
HERPUD1-215ENST00000568676 NCR3O14931 201 aa8.73□□□□□ -1.01
HERPUD1-215ENST00000568676 SMIM13P0DJ93 91 aa8.73□□□□□ -1.01
HERPUD1-215ENST00000568676 FABP4P15090 132 aa8.73□□□□□ -1.01
HERPUD1-215ENST00000568676 MEIG1Q5JSS6 88 aa8.73□□□□□ -1.01
HERPUD1-215ENST00000568676 TRBV10-3A0A0K0K1G6 114 aa8.72□□□□□ -1.01
HERPUD1-215ENST00000568676 TMEM223A0PJW6 202 aa8.72□□□□□ -1.01
HERPUD1-215ENST00000568676 CFC1BP0CG36 223 aa8.72□□□□□ -1.01
HERPUD1-215ENST00000568676 MIR7-3HGQ8N6C7 128 aa8.72□□□□□ -1.01
HERPUD1-215ENST00000568676 MAP1LC3CQ9BXW4 147 aa8.72□□□□□ -1.01
HERPUD1-215ENST00000568676 FSIP2Q5CZC0 6907 aa8.72□□□□□ -1.01
HERPUD1-215ENST00000568676 B5MCH6 92 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms