RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 IFITM2Q01629 132 aa10.79□□□□□ -0.68
ABCA3-204ENST00000566200 PMCHL1Q16048 86 aa10.78□□□□□ -0.68
ABCA3-204ENST00000566200 CBLN2Q8IUK8 224 aa10.78□□□□□ -0.68
ABCA3-204ENST00000566200 C18orf32Q8TCD1 76 aa10.78□□□□□ -0.68
ABCA3-204ENST00000566200 HBDP02042 147 aa10.76□□□□□ -0.69
ABCA3-204ENST00000566200 LINC00614P0C842 121 aa10.76□□□□□ -0.69
ABCA3-204ENST00000566200 HIGD2AQ9BW72 106 aa10.76□□□□□ -0.69
ABCA3-204ENST00000566200 C10orf91Q5T1B1 145 aa10.74□□□□□ -0.69
ABCA3-204ENST00000566200 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
ABCA3-204ENST00000566200 BAGE3Q86Y29 109 aa10.74□□□□□ -0.69
ABCA3-204ENST00000566200 SPRR4Q96PI1 79 aa10.74□□□□□ -0.69
ABCA3-204ENST00000566200 PPDPFQ9H3Y8 114 aa10.73□□□□□ -0.69
ABCA3-204ENST00000566200 SFTA2Q6UW10 78 aa10.72□□□□□ -0.69
ABCA3-204ENST00000566200 RPS10P5Q9NQ39 176 aa10.72□□□□□ -0.69
ABCA3-204ENST00000566200 RHEBQ15382 184 aa10.71□□□□□ -0.69
ABCA3-204ENST00000566200 A0A0U1RRA0 63 aa10.7□□□□□ -0.7
ABCA3-204ENST00000566200 LINC00158P58513 81 aa10.7□□□□□ -0.7
ABCA3-204ENST00000566200 COMMD7Q86VX2 200 aa10.7□□□□□ -0.7
ABCA3-204ENST00000566200 TRAPPC1Q9Y5R8 145 aa10.7□□□□□ -0.7
ABCA3-204ENST00000566200 SPAG11AQ6PDA7 123 aa10.69□□□□□ -0.7
ABCA3-204ENST00000566200 TMEM223A0PJW6 202 aa10.68□□□□□ -0.7
ABCA3-204ENST00000566200 CHTOPQ9Y3Y2 248 aaKnown RBP10.67□□□□□ -0.7
ABCA3-204ENST00000566200 SPRR1AP35321 89 aa10.66□□□□□ -0.7
ABCA3-204ENST00000566200 DAND5Q8N907 189 aa10.66□□□□□ -0.7
ABCA3-204ENST00000566200 KRTAP4-16G5E9R7 235 aaPredicted RBP10.65□□□□□ -0.7
ABCA3-204ENST00000566200 PRYO14603 147 aa10.65□□□□□ -0.7
ABCA3-204ENST00000566200 SMIM13P0DJ93 91 aa10.65□□□□□ -0.7
ABCA3-204ENST00000566200 FP248Q71RG6 208 aaPredicted RBP10.65□□□□□ -0.7
ABCA3-204ENST00000566200 Q8NBF4 154 aa10.65□□□□□ -0.7
ABCA3-204ENST00000566200 NCR3O14931 201 aa10.64□□□□□ -0.71
ABCA3-204ENST00000566200 KRTAP13-3Q3SY46 172 aa10.64□□□□□ -0.71
ABCA3-204ENST00000566200 LINC00337Q8N6G1 96 aa10.64□□□□□ -0.71
ABCA3-204ENST00000566200 ZNF706Q9Y5V0 76 aaPredicted RBP10.64□□□□□ -0.71
ABCA3-204ENST00000566200 BOD1L2Q8IYS8 172 aa10.63□□□□□ -0.71
ABCA3-204ENST00000566200 SMCR5Q8TEV8 140 aa10.63□□□□□ -0.71
ABCA3-204ENST00000566200 KCNQ1DNQ9H478 68 aa10.63□□□□□ -0.71
ABCA3-204ENST00000566200 TRAV12-1A0A0B4J245 112 aa10.62□□□□□ -0.71
ABCA3-204ENST00000566200 MIR7-3HGQ8N6C7 128 aa10.62□□□□□ -0.71
ABCA3-204ENST00000566200 KRTAP9-6A0A140TA67 174 aa10.61□□□□□ -0.71
ABCA3-204ENST00000566200 C4orf48Q5BLP8 95 aa10.61□□□□□ -0.71
ABCA3-204ENST00000566200 TRBV10-3A0A0K0K1G6 114 aa10.59□□□□□ -0.71
ABCA3-204ENST00000566200 LINC00483Q53H64 154 aa10.59□□□□□ -0.71
ABCA3-204ENST00000566200 IFI27L1Q96BM0 104 aa10.59□□□□□ -0.71
ABCA3-204ENST00000566200 KRTAP4-1Q9BYQ7 146 aa10.59□□□□□ -0.71
ABCA3-204ENST00000566200 ASB16-AS1Q495Z4 193 aa10.58□□□□□ -0.72
ABCA3-204ENST00000566200 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
ABCA3-204ENST00000566200 ETDCA0A1B0GVM5 59 aa10.57□□□□□ -0.72
ABCA3-204ENST00000566200 ATP6V1G1O75348 118 aa10.57□□□□□ -0.72
ABCA3-204ENST00000566200 SPINK1P00995 79 aa10.57□□□□□ -0.72
ABCA3-204ENST00000566200 ERC2-IT1O76042 136 aa10.56□□□□□ -0.72
ABCA3-204ENST00000566200 HERV-K104P63124 156 aa10.56□□□□□ -0.72
ABCA3-204ENST00000566200 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
ABCA3-204ENST00000566200 B5MCH6 92 aa10.55□□□□□ -0.72
ABCA3-204ENST00000566200 YPEL4Q96NS1 127 aa10.55□□□□□ -0.72
ABCA3-204ENST00000566200 NDUFA12Q9UI09 145 aa10.55□□□□□ -0.72
ABCA3-204ENST00000566200 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
ABCA3-204ENST00000566200 APOC3P02656 99 aa10.53□□□□□ -0.72
ABCA3-204ENST00000566200 NDUFA5Q16718 116 aa10.53□□□□□ -0.72
ABCA3-204ENST00000566200 GAGE2AQ6NT46 116 aa10.53□□□□□ -0.72
ABCA3-204ENST00000566200 MOBPQ13875 183 aa10.52□□□□□ -0.73
ABCA3-204ENST00000566200 Q8N377 158 aa10.52□□□□□ -0.73
ABCA3-204ENST00000566200 LOC107984156A0A0G2JMH3 177 aa10.51□□□□□ -0.73
ABCA3-204ENST00000566200 ARL17AQ8IVW1 177 aa10.51□□□□□ -0.73
ABCA3-204ENST00000566200 FAM19A2Q8N3H0 131 aa10.51□□□□□ -0.73
ABCA3-204ENST00000566200 Q9BRP9 147 aa10.51□□□□□ -0.73
ABCA3-204ENST00000566200 MYMXA0A1B0GTQ4 84 aa10.5□□□□□ -0.73
ABCA3-204ENST00000566200 LINC00587B1AMM8 73 aa10.5□□□□□ -0.73
ABCA3-204ENST00000566200 IGLV9-49A0A0B4J1Y8 123 aa10.49□□□□□ -0.73
ABCA3-204ENST00000566200 SNAPINO95295 136 aa10.49□□□□□ -0.73
ABCA3-204ENST00000566200 S100A1P23297 94 aa10.49□□□□□ -0.73
ABCA3-204ENST00000566200 RPS29P62273 56 aaKnown RBP10.48□□□□□ -0.73
ABCA3-204ENST00000566200 MAP1LC3CQ9BXW4 147 aa10.48□□□□□ -0.73
ABCA3-204ENST00000566200 DDTP30046 118 aa10.47□□□□□ -0.73
ABCA3-204ENST00000566200 Q6ZRX8 168 aa10.47□□□□□ -0.73
ABCA3-204ENST00000566200 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
ABCA3-204ENST00000566200 SVBPQ8N300 66 aa10.47□□□□□ -0.73
ABCA3-204ENST00000566200 TRBV10-2A0A0K0K1G8 114 aa10.46□□□□□ -0.73
ABCA3-204ENST00000566200 H0Y8G0 127 aa10.46□□□□□ -0.73
ABCA3-204ENST00000566200 HSBP1O75506 76 aa10.46□□□□□ -0.73
ABCA3-204ENST00000566200 SEC61BP60468 96 aaKnown RBP10.46□□□□□ -0.73
ABCA3-204ENST00000566200 LEPROTO15243 131 aa10.45□□□□□ -0.74
ABCA3-204ENST00000566200 LINC01547P58512 204 aaPredicted RBP10.44□□□□□ -0.74
ABCA3-204ENST00000566200 LINC00310P59036 64 aa10.44□□□□□ -0.74
ABCA3-204ENST00000566200 S100A12P80511 92 aa10.44□□□□□ -0.74
ABCA3-204ENST00000566200 IGLV6-57P01721 117 aa10.43□□□□□ -0.74
ABCA3-204ENST00000566200 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
ABCA3-204ENST00000566200 SLC25A20O43772 301 aa10.42□□□□□ -0.74
ABCA3-204ENST00000566200 XP32Q5T750 250 aa10.42□□□□□ -0.74
ABCA3-204ENST00000566200 J3QQQ9 107 aa10.41□□□□□ -0.74
ABCA3-204ENST00000566200 EIF4EBP3O60516 100 aaPredicted RBP10.41□□□□□ -0.74
ABCA3-204ENST00000566200 SOSTDC1Q6X4U4 206 aa10.4□□□□□ -0.74
ABCA3-204ENST00000566200 LEPROTL1O95214 131 aa10.39□□□□□ -0.75
ABCA3-204ENST00000566200 NDUFC2O95298 119 aa10.39□□□□□ -0.75
ABCA3-204ENST00000566200 PMCHL2Q9BQD1 86 aa10.39□□□□□ -0.75
ABCA3-204ENST00000566200 SERF1AO75920 110 aa10.38□□□□□ -0.75
ABCA3-204ENST00000566200 PLNP26678 52 aa10.38□□□□□ -0.75
ABCA3-204ENST00000566200 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
ABCA3-204ENST00000566200 ST20-AS1Q8NBB2 130 aa10.38□□□□□ -0.75
ABCA3-204ENST00000566200 TRAV23DV6A0A075B6W5 121 aa10.37□□□□□ -0.75
ABCA3-204ENST00000566200 S100A7L2Q5SY68 101 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms