RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PLA2G2DQ9UNK4 145 aa5.25□□□□□ -1.57
UBR1-204ENST00000563239 C22orf24Q9Y442 160 aa5.25□□□□□ -1.57
UBR1-204ENST00000563239 SYS1-DBNDD2H3BUS1 97 aa5.24□□□□□ -1.57
UBR1-204ENST00000563239 PLNP26678 52 aa5.24□□□□□ -1.57
UBR1-204ENST00000563239 PFN2P35080 140 aa5.24□□□□□ -1.57
UBR1-204ENST00000563239 Q8NDZ9 215 aa5.24□□□□□ -1.57
UBR1-204ENST00000563239 IGLV5-37A0A075B6J1 123 aa5.23□□□□□ -1.57
UBR1-204ENST00000563239 LEPROTO15243 131 aa5.23□□□□□ -1.57
UBR1-204ENST00000563239 OXTP01178 125 aa5.23□□□□□ -1.57
UBR1-204ENST00000563239 IGKCP01834 107 aa5.23□□□□□ -1.57
UBR1-204ENST00000563239 COX17Q14061 63 aa5.23□□□□□ -1.57
UBR1-204ENST00000563239 LINC01545Q5VT33 79 aa5.23□□□□□ -1.57
UBR1-204ENST00000563239 SFTA2Q6UW10 78 aa5.23□□□□□ -1.57
UBR1-204ENST00000563239 SND1-IT1Q9HBX3 110 aa5.23□□□□□ -1.57
UBR1-204ENST00000563239 TP73-AS1Q9UF72 201 aa5.23□□□□□ -1.57
UBR1-204ENST00000563239 TNXBP22105 4242 aa5.22□□□□□ -1.57
UBR1-204ENST00000563239 C3orf79P0CE67 100 aa5.22□□□□□ -1.57
UBR1-204ENST00000563239 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
UBR1-204ENST00000563239 C1orf137Q5JT78 98 aa5.22□□□□□ -1.57
UBR1-204ENST00000563239 SPINK6Q6UWN8 80 aa5.22□□□□□ -1.57
UBR1-204ENST00000563239 NDUFA12Q9UI09 145 aa5.22□□□□□ -1.57
UBR1-204ENST00000563239 IGLV7-43P04211 117 aa5.21□□□□□ -1.58
UBR1-204ENST00000563239 SMIM13P0DJ93 91 aa5.21□□□□□ -1.58
UBR1-204ENST00000563239 VPREB1P12018 145 aa5.21□□□□□ -1.58
UBR1-204ENST00000563239 PET117Q6UWS5 81 aa5.21□□□□□ -1.58
UBR1-204ENST00000563239 MRPL55Q7Z7F7 128 aaKnown RBP5.21□□□□□ -1.58
UBR1-204ENST00000563239 PLEKHB2Q96CS7 222 aa5.21□□□□□ -1.58
UBR1-204ENST00000563239 LINC00167Q96N53 147 aa5.21□□□□□ -1.58
UBR1-204ENST00000563239 A0A0U1RRA0 63 aa5.2□□□□□ -1.58
UBR1-204ENST00000563239 J3QQQ9 107 aa5.2□□□□□ -1.58
UBR1-204ENST00000563239 LINC00158P58513 81 aa5.2□□□□□ -1.58
UBR1-204ENST00000563239 HERV-K104P63124 156 aa5.2□□□□□ -1.58
UBR1-204ENST00000563239 UBE2BP63146 152 aa5.2□□□□□ -1.58
UBR1-204ENST00000563239 LBHQ53QV2 105 aaPredicted RBP5.2□□□□□ -1.58
UBR1-204ENST00000563239 MYMXA0A1B0GTQ4 84 aa5.19□□□□□ -1.58
UBR1-204ENST00000563239 GAGE10A6NGK3 116 aa5.19□□□□□ -1.58
UBR1-204ENST00000563239 RPL37AP8A6NKH3 93 aa5.19□□□□□ -1.58
UBR1-204ENST00000563239 E9PLD3 99 aa5.19□□□□□ -1.58
UBR1-204ENST00000563239 HERVK_113P61574 105 aa5.19□□□□□ -1.58
UBR1-204ENST00000563239 HIST3H2BBQ8N257 126 aa5.19□□□□□ -1.58
UBR1-204ENST00000563239 KRTDAPP60985 99 aa5.18□□□□□ -1.58
UBR1-204ENST00000563239 MIR7-3HGQ8N6C7 128 aa5.18□□□□□ -1.58
UBR1-204ENST00000563239 LINC01600Q96MT4 127 aa5.18□□□□□ -1.58
UBR1-204ENST00000563239 IGKV2D-26A0A0A0MRZ7 120 aa5.17□□□□□ -1.58
UBR1-204ENST00000563239 LGALS3P17931 250 aaKnown RBP5.17□□□□□ -1.58
UBR1-204ENST00000563239 NMUP48645 174 aa5.17□□□□□ -1.58
UBR1-204ENST00000563239 MEIG1Q5JSS6 88 aa5.17□□□□□ -1.58
UBR1-204ENST00000563239 NKAPP1Q8N9T2 125 aa5.17□□□□□ -1.58
UBR1-204ENST00000563239 HIST1H2BLQ99880 126 aa5.17□□□□□ -1.58
UBR1-204ENST00000563239 IGLV1-50A0A075B6I6 118 aa5.16□□□□□ -1.58
UBR1-204ENST00000563239 LOC107984156A0A0G2JMH3 177 aa5.16□□□□□ -1.58
UBR1-204ENST00000563239 A0A0J9YXY3 114 aa5.16□□□□□ -1.58
UBR1-204ENST00000563239 LINC00587B1AMM8 73 aa5.16□□□□□ -1.58
UBR1-204ENST00000563239 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
UBR1-204ENST00000563239 RPL24P83731 157 aaKnown RBP5.16□□□□□ -1.58
UBR1-204ENST00000563239 ADAMTSL4-AS1Q5T5F5 129 aa5.16□□□□□ -1.58
UBR1-204ENST00000563239 KRTAP13-1Q8IUC0 172 aa5.16□□□□□ -1.58
UBR1-204ENST00000563239 ARL17AQ8IVW1 177 aa5.16□□□□□ -1.58
UBR1-204ENST00000563239 DAND5Q8N907 189 aa5.16□□□□□ -1.58
UBR1-204ENST00000563239 RNF213Q63HN8 5207 aa5.16□□□□□ -1.58
UBR1-204ENST00000563239 HMCN2Q8NDA2 5059 aa5.15□□□□□ -1.58
UBR1-204ENST00000563239 IGKV2-28A0A075B6P5 120 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 H0Y9J4 135 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 ZNF861PO60384 105 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 BCE1O60756 84 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 IGKV2D-28P01615 120 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 KRTAP1-4P0C5Y4 121 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 REG3GQ6UW15 175 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 BOD1L2Q8IYS8 172 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 DIRC1Q969H9 104 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 LITAFQ99732 161 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 TTTY13Q9BZ97 58 aa5.15□□□□□ -1.59
UBR1-204ENST00000563239 TMEM238C9JI98 176 aa5.14□□□□□ -1.59
UBR1-204ENST00000563239 M0R378 163 aa5.14□□□□□ -1.59
UBR1-204ENST00000563239 SOSTDC1Q6X4U4 206 aa5.14□□□□□ -1.59
UBR1-204ENST00000563239 ATOH7Q8N100 152 aa5.14□□□□□ -1.59
UBR1-204ENST00000563239 C5orf52A6NGY3 159 aa5.13□□□□□ -1.59
UBR1-204ENST00000563239 SNRPEP62304 92 aaKnown RBP5.13□□□□□ -1.59
UBR1-204ENST00000563239 TMEM126AQ9H061 195 aa5.13□□□□□ -1.59
UBR1-204ENST00000563239 C20orf202A1L168 122 aa5.12□□□□□ -1.59
UBR1-204ENST00000563239 NCR3O14931 201 aa5.12□□□□□ -1.59
UBR1-204ENST00000563239 S100A6P06703 90 aa5.12□□□□□ -1.59
UBR1-204ENST00000563239 S100A2P29034 98 aa5.12□□□□□ -1.59
UBR1-204ENST00000563239 ZNF815PA8K554 130 aa5.11□□□□□ -1.59
UBR1-204ENST00000563239 TIMM17BO60830 172 aa5.11□□□□□ -1.59
UBR1-204ENST00000563239 RPL28P46779 137 aaKnown RBP5.11□□□□□ -1.59
UBR1-204ENST00000563239 TRBV10-3A0A0K0K1G6 114 aa5.1□□□□□ -1.59
UBR1-204ENST00000563239 KRTAP4-16G5E9R7 235 aaPredicted RBP5.1□□□□□ -1.59
UBR1-204ENST00000563239 NDUFC2O95298 119 aa5.1□□□□□ -1.59
UBR1-204ENST00000563239 SPRR1AP35321 89 aa5.1□□□□□ -1.59
UBR1-204ENST00000563239 NPC2P61916 151 aa5.1□□□□□ -1.59
UBR1-204ENST00000563239 PRLHP81277 87 aa5.1□□□□□ -1.59
UBR1-204ENST00000563239 PCP2Q8IVA1 136 aa5.1□□□□□ -1.59
UBR1-204ENST00000563239 PRR26Q8N8Z3 221 aa5.1□□□□□ -1.59
UBR1-204ENST00000563239 LINC00308Q8TCZ7 52 aa5.1□□□□□ -1.59
UBR1-204ENST00000563239 CDIP1Q9H305 208 aa5.1□□□□□ -1.59
UBR1-204ENST00000563239 KCNQ1DNQ9H478 68 aa5.1□□□□□ -1.59
UBR1-204ENST00000563239 MUC2Q02817 5179 aa5.09□□□□□ -1.59
UBR1-204ENST00000563239 TRBV10-2A0A0K0K1G8 114 aa5.09□□□□□ -1.59
UBR1-204ENST00000563239 UBE2AP49459 152 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms