RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 CYSTM1Q9H1C7 97 aa6.31□□□□□ -1.4
LINC00838-201ENST00000562956 SPAG11BQ08648 103 aa6.31□□□□□ -1.4
LINC00838-201ENST00000562956 DNAH9Q9NYC9 4486 aa6.3□□□□□ -1.4
LINC00838-201ENST00000562956 CXCL5P42830 114 aa6.3□□□□□ -1.4
LINC00838-201ENST00000562956 CCL18P55774 89 aa6.3□□□□□ -1.4
LINC00838-201ENST00000562956 C9orf116Q5BN46 136 aaPredicted RBP6.3□□□□□ -1.4
LINC00838-201ENST00000562956 GAGE2AQ6NT46 116 aa6.3□□□□□ -1.4
LINC00838-201ENST00000562956 C10orf25Q5T742 122 aa6.3□□□□□ -1.4
LINC00838-201ENST00000562956 SND1-IT1Q9HBX3 110 aa6.3□□□□□ -1.4
LINC00838-201ENST00000562956 DNAH10OSP0CZ25 163 aa6.29□□□□□ -1.4
LINC00838-201ENST00000562956 UNQ6190/PRO20217Q6UXQ8 127 aa6.29□□□□□ -1.4
LINC00838-201ENST00000562956 STAB2Q8WWQ8 2551 aa6.29□□□□□ -1.4
LINC00838-201ENST00000562956 IGKV2-28A0A075B6P5 120 aa6.29□□□□□ -1.4
LINC00838-201ENST00000562956 IGKV2D-28P01615 120 aa6.29□□□□□ -1.4
LINC00838-201ENST00000562956 C5orf47Q569G3 176 aa6.29□□□□□ -1.4
LINC00838-201ENST00000562956 SDIM1Q6ZPB5 146 aa6.29□□□□□ -1.4
LINC00838-201ENST00000562956 Q9HAA7 133 aa6.29□□□□□ -1.4
LINC00838-201ENST00000562956 FAM240AA0A1B0GVK7 77 aa6.28□□□□□ -1.4
LINC00838-201ENST00000562956 J3KT08 172 aa6.28□□□□□ -1.4
LINC00838-201ENST00000562956 UQCRQO14949 82 aa6.28□□□□□ -1.4
LINC00838-201ENST00000562956 IGKV3D-7A0A0C4DH55 119 aa6.28□□□□□ -1.4
LINC00838-201ENST00000562956 LINC00337Q8N6G1 96 aa6.28□□□□□ -1.4
LINC00838-201ENST00000562956 COX17Q14061 63 aa6.27□□□□□ -1.41
LINC00838-201ENST00000562956 C1orf43Q9BWL3 253 aa6.27□□□□□ -1.41
LINC00838-201ENST00000562956 DNHD1Q96M86 4753 aa6.27□□□□□ -1.41
LINC00838-201ENST00000562956 IGKV2D-24A0A075B6R9 120 aa6.27□□□□□ -1.41
LINC00838-201ENST00000562956 HIGD2BQ4VC39 106 aa6.27□□□□□ -1.41
LINC00838-201ENST00000562956 DSCR8Q96T75 97 aa6.27□□□□□ -1.41
LINC00838-201ENST00000562956 BAALC-AS2P0C853 105 aa6.26□□□□□ -1.41
LINC00838-201ENST00000562956 A0A087WVE0 104 aa6.26□□□□□ -1.41
LINC00838-201ENST00000562956 LINC00643Q86TS7 51 aa6.26□□□□□ -1.41
LINC00838-201ENST00000562956 C15orf56Q8N910 161 aa6.26□□□□□ -1.41
LINC00838-201ENST00000562956 TRAV13-2A0A0B4J235 113 aa6.26□□□□□ -1.41
LINC00838-201ENST00000562956 LYSTQ99698 3801 aa6.25□□□□□ -1.41
LINC00838-201ENST00000562956 COX7CP15954 63 aa6.25□□□□□ -1.41
LINC00838-201ENST00000562956 C6orf48Q9UBA6 75 aa6.25□□□□□ -1.41
LINC00838-201ENST00000562956 ZNF561-AS1K7EIQ3 104 aa6.24□□□□□ -1.41
LINC00838-201ENST00000562956 PRR3P79522 188 aaKnown RBP6.24□□□□□ -1.41
LINC00838-201ENST00000562956 FAM218AQ96MZ4 157 aa6.24□□□□□ -1.41
LINC00838-201ENST00000562956 UPK3BQ9BT76 320 aa6.24□□□□□ -1.41
LINC00838-201ENST00000562956 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
LINC00838-201ENST00000562956 A0A1B0GX51 115 aa6.24□□□□□ -1.41
LINC00838-201ENST00000562956 C4orf26Q17RF5 130 aa6.24□□□□□ -1.41
LINC00838-201ENST00000562956 LINC01600Q96MT4 127 aa6.24□□□□□ -1.41
LINC00838-201ENST00000562956 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
LINC00838-201ENST00000562956 Q8NDZ9 215 aa6.23□□□□□ -1.41
LINC00838-201ENST00000562956 HRCT1Q6UXD1 115 aa6.23□□□□□ -1.41
LINC00838-201ENST00000562956 CAMK2N2Q96S95 79 aa6.23□□□□□ -1.41
LINC00838-201ENST00000562956 IMUPQ9GZP8 106 aa6.23□□□□□ -1.41
LINC00838-201ENST00000562956 CSMD3Q7Z407 3707 aa6.23□□□□□ -1.41
LINC00838-201ENST00000562956 PRKDCP78527 4128 aaKnown RBP6.23□□□□□ -1.41
LINC00838-201ENST00000562956 TRACP01848 142 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 ACYP1P07311 99 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 C9orf129Q5T035 196 aaKnown RBP6.22□□□□□ -1.41
LINC00838-201ENST00000562956 C2orf48Q96LS8 159 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 C14orf132Q9NPU4 83 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 APLNQ9ULZ1 77 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 DNAH1Q9P2D7 4330 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 CASC10Q5T4H9 136 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 Q6ZRU5 148 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 OR13C6PQ8NH95 151 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 OXTP01178 125 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 RPL28P46779 137 aaKnown RBP6.22□□□□□ -1.41
LINC00838-201ENST00000562956 SMIM11BQ8TCY0 68 aa6.22□□□□□ -1.41
LINC00838-201ENST00000562956 NDUFC2O95298 119 aa6.21□□□□□ -1.42
LINC00838-201ENST00000562956 DYNC2H1Q8NCM8 4307 aaKnown RBP6.21□□□□□ -1.42
LINC00838-201ENST00000562956 DNAL4O96015 105 aa6.2□□□□□ -1.42
LINC00838-201ENST00000562956 HIST1H4AP62805 103 aaKnown RBP6.2□□□□□ -1.42
LINC00838-201ENST00000562956 MUC7Q8TAX7 377 aa6.2□□□□□ -1.42
LINC00838-201ENST00000562956 C22orf24Q9Y442 160 aa6.2□□□□□ -1.42
LINC00838-201ENST00000562956 NCR3O14931 201 aa6.19□□□□□ -1.42
LINC00838-201ENST00000562956 KRTAP1-5Q9BYS1 174 aa6.19□□□□□ -1.42
LINC00838-201ENST00000562956 XAGE1AQ9HD64 81 aa6.19□□□□□ -1.42
LINC00838-201ENST00000562956 DPH3Q96FX2 82 aa6.19□□□□□ -1.42
LINC00838-201ENST00000562956 ATOX1O00244 68 aa6.19□□□□□ -1.42
LINC00838-201ENST00000562956 CRYGAP11844 174 aa6.19□□□□□ -1.42
LINC00838-201ENST00000562956 USP17L23D6RBM5 183 aa6.18□□□□□ -1.42
LINC00838-201ENST00000562956 SLPIP03973 132 aa6.18□□□□□ -1.42
LINC00838-201ENST00000562956 UBE2DNLQ8IWF7 75 aa6.18□□□□□ -1.42
LINC00838-201ENST00000562956 DNAH7Q8WXX0 4024 aa6.18□□□□□ -1.42
LINC00838-201ENST00000562956 SYCNQ0VAF6 134 aa6.18□□□□□ -1.42
LINC00838-201ENST00000562956 RPL18AQ02543 176 aaKnown RBP6.17□□□□□ -1.42
LINC00838-201ENST00000562956 RMI2Q96E14 147 aa6.17□□□□□ -1.42
LINC00838-201ENST00000562956 LINC00846Q9NV44 126 aa6.17□□□□□ -1.42
LINC00838-201ENST00000562956 A0A087WYN8 130 aa6.17□□□□□ -1.42
LINC00838-201ENST00000562956 NUPR2A6NF83 97 aa6.17□□□□□ -1.42
LINC00838-201ENST00000562956 NDUFC2-KCTD14E9PQ53 114 aa6.17□□□□□ -1.42
LINC00838-201ENST00000562956 LECT2O14960 151 aa6.17□□□□□ -1.42
LINC00838-201ENST00000562956 F8WDY8 70 aa6.16□□□□□ -1.42
LINC00838-201ENST00000562956 Q6ZRP5 223 aa6.16□□□□□ -1.42
LINC00838-201ENST00000562956 INAFM2P0DMQ5 153 aa6.16□□□□□ -1.42
LINC00838-201ENST00000562956 TENM2Q9NT68 2774 aa6.16□□□□□ -1.42
LINC00838-201ENST00000562956 S100A7L2Q5SY68 101 aa6.15□□□□□ -1.42
LINC00838-201ENST00000562956 TRAV23DV6A0A075B6W5 121 aa6.15□□□□□ -1.43
LINC00838-201ENST00000562956 SERP2Q8N6R1 65 aa6.15□□□□□ -1.43
LINC00838-201ENST00000562956 H0YGX0 51 aa6.14□□□□□ -1.43
LINC00838-201ENST00000562956 PLECQ15149 4684 aaKnown RBP6.14□□□□□ -1.43
LINC00838-201ENST00000562956 KRTAP21-3Q3LHN1 58 aa6.14□□□□□ -1.43
LINC00838-201ENST00000562956 IGLV6-57P01721 117 aa6.13□□□□□ -1.43
LINC00838-201ENST00000562956 VPREB1P12018 145 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms