RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SPATA3Q8NHX4 192 aa5.28□□□□□ -1.56
TCF4-216ENST00000562680 B9D2Q9BPU9 175 aa5.27□□□□□ -1.57
TCF4-216ENST00000562680 M0R378 163 aa5.26□□□□□ -1.57
TCF4-216ENST00000562680 LIMD2Q9BT23 127 aa5.26□□□□□ -1.57
TCF4-216ENST00000562680 LRCOL1A6NCL2 159 aa5.26□□□□□ -1.57
TCF4-216ENST00000562680 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
TCF4-216ENST00000562680 LINC00612Q8N6U2 182 aa5.26□□□□□ -1.57
TCF4-216ENST00000562680 TRBV10-3A0A0K0K1G6 114 aa5.26□□□□□ -1.57
TCF4-216ENST00000562680 CYSRT1A8MQ03 144 aa5.26□□□□□ -1.57
TCF4-216ENST00000562680 IGLV5-45A0A087WSX0 123 aa5.26□□□□□ -1.57
TCF4-216ENST00000562680 NTM-AS1Q6ZSK4 140 aa5.26□□□□□ -1.57
TCF4-216ENST00000562680 IGLV5-39A0A0G2JS06 123 aa5.25□□□□□ -1.57
TCF4-216ENST00000562680 CDH23Q9H251 3354 aa5.25□□□□□ -1.57
TCF4-216ENST00000562680 UNC80Q8N2C7 3258 aa5.25□□□□□ -1.57
TCF4-216ENST00000562680 ATRQ13535 2644 aa5.25□□□□□ -1.57
TCF4-216ENST00000562680 ZNF706Q9Y5V0 76 aaPredicted RBP5.25□□□□□ -1.57
TCF4-216ENST00000562680 IGKV2-24A0A0C4DH68 120 aa5.24□□□□□ -1.57
TCF4-216ENST00000562680 WFDC10BQ8IUB3 73 aa5.24□□□□□ -1.57
TCF4-216ENST00000562680 IGHV3OR16-9A0A0B4J2B5 98 aa5.24□□□□□ -1.57
TCF4-216ENST00000562680 CHD6Q8TD26 2715 aa5.24□□□□□ -1.57
TCF4-216ENST00000562680 TMEM254Q8TBM7 123 aa5.24□□□□□ -1.57
TCF4-216ENST00000562680 GIG44P09565 113 aaPredicted RBP5.23□□□□□ -1.57
TCF4-216ENST00000562680 COX6A2Q02221 97 aa5.23□□□□□ -1.57
TCF4-216ENST00000562680 XAGE1AQ9HD64 81 aa5.23□□□□□ -1.57
TCF4-216ENST00000562680 WDFY4Q6ZS81 3184 aa5.23□□□□□ -1.57
TCF4-216ENST00000562680 LY6G6CO95867 125 aa5.22□□□□□ -1.57
TCF4-216ENST00000562680 ATP11AUNQ6ZP68 121 aa5.22□□□□□ -1.57
TCF4-216ENST00000562680 A0A0C4DFX4 3053 aa5.22□□□□□ -1.57
TCF4-216ENST00000562680 UNQ6190/PRO20217Q6UXQ8 127 aa5.22□□□□□ -1.57
TCF4-216ENST00000562680 BPY2O14599 106 aa5.22□□□□□ -1.57
TCF4-216ENST00000562680 TSPEAR-AS2P59090 65 aa5.22□□□□□ -1.57
TCF4-216ENST00000562680 HCG22E2RYF7 251 aa5.22□□□□□ -1.57
TCF4-216ENST00000562680 DHRS4-AS1Q9P1J3 65 aa5.22□□□□□ -1.57
TCF4-216ENST00000562680 SCXQ7RTU7 201 aa5.21□□□□□ -1.57
TCF4-216ENST00000562680 C7orf33Q8WU49 177 aa5.21□□□□□ -1.58
TCF4-216ENST00000562680 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.21□□□□□ -1.58
TCF4-216ENST00000562680 K7EIL1 84 aa5.21□□□□□ -1.58
TCF4-216ENST00000562680 C6orf99Q4VX62 202 aa5.21□□□□□ -1.58
TCF4-216ENST00000562680 KRTAP10-11P60412 298 aa5.2□□□□□ -1.58
TCF4-216ENST00000562680 Q6ZRU5 148 aa5.2□□□□□ -1.58
TCF4-216ENST00000562680 SZT2Q5T011 3432 aa5.2□□□□□ -1.58
TCF4-216ENST00000562680 TM2D3Q9BRN9 247 aa5.19□□□□□ -1.58
TCF4-216ENST00000562680 RPL28P46779 137 aaKnown RBP5.19□□□□□ -1.58
TCF4-216ENST00000562680 LINC00846Q9NV44 126 aa5.19□□□□□ -1.58
TCF4-216ENST00000562680 C1orf134Q5TEV5 83 aa5.19□□□□□ -1.58
TCF4-216ENST00000562680 MAST4O15021 2626 aa5.19□□□□□ -1.58
TCF4-216ENST00000562680 M0R2N4 97 aa5.18□□□□□ -1.58
TCF4-216ENST00000562680 SLPIP03973 132 aa5.18□□□□□ -1.58
TCF4-216ENST00000562680 DNAH10OSP0CZ25 163 aa5.18□□□□□ -1.58
TCF4-216ENST00000562680 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.18□□□□□ -1.58
TCF4-216ENST00000562680 CYP4F30PQ9H0H9 118 aa5.18□□□□□ -1.58
TCF4-216ENST00000562680 KLKP1Q107X0 134 aa5.18□□□□□ -1.58
TCF4-216ENST00000562680 HIGD2AQ9BW72 106 aa5.18□□□□□ -1.58
TCF4-216ENST00000562680 SMIM11BQ8TCY0 68 aa5.17□□□□□ -1.58
TCF4-216ENST00000562680 H7BZZ5 65 aa5.17□□□□□ -1.58
TCF4-216ENST00000562680 H0Y9J4 135 aa5.17□□□□□ -1.58
TCF4-216ENST00000562680 SMCR5Q8TEV8 140 aa5.17□□□□□ -1.58
TCF4-216ENST00000562680 C8orf87E5RJ46 101 aa5.16□□□□□ -1.58
TCF4-216ENST00000562680 RETNLBQ9BQ08 111 aa5.16□□□□□ -1.58
TCF4-216ENST00000562680 WWC2-AS2Q96NR7 200 aa5.16□□□□□ -1.58
TCF4-216ENST00000562680 Q8N3U1 123 aa5.16□□□□□ -1.58
TCF4-216ENST00000562680 ADAMTSL4-AS1Q5T5F5 129 aa5.16□□□□□ -1.58
TCF4-216ENST00000562680 FLNCQ14315 2725 aa5.16□□□□□ -1.58
TCF4-216ENST00000562680 PRR4Q16378 134 aa5.15□□□□□ -1.58
TCF4-216ENST00000562680 LINC00588Q9Y4M8 146 aa5.15□□□□□ -1.59
TCF4-216ENST00000562680 A8MUN3 132 aa5.15□□□□□ -1.59
TCF4-216ENST00000562680 MGAM2Q2M2H8 2515 aa5.14□□□□□ -1.59
TCF4-216ENST00000562680 GVQW2A0A096LPI5 108 aaPredicted RBP5.14□□□□□ -1.59
TCF4-216ENST00000562680 C6orf223Q8N319 242 aa5.14□□□□□ -1.59
TCF4-216ENST00000562680 NBDYA0A0U1RRE5 68 aa5.14□□□□□ -1.59
TCF4-216ENST00000562680 BAHCC1Q9P281 2608 aa5.14□□□□□ -1.59
TCF4-216ENST00000562680 C9orf116Q5BN46 136 aaPredicted RBP5.14□□□□□ -1.59
TCF4-216ENST00000562680 Q6ZQY7 126 aa5.14□□□□□ -1.59
TCF4-216ENST00000562680 PRR34Q9NV39 138 aa5.14□□□□□ -1.59
TCF4-216ENST00000562680 IGLV5-52A0A0A0MRZ9 124 aa5.13□□□□□ -1.59
TCF4-216ENST00000562680 VPS13AQ96RL7 3174 aa5.13□□□□□ -1.59
TCF4-216ENST00000562680 IGKV2-28A0A075B6P5 120 aa5.13□□□□□ -1.59
TCF4-216ENST00000562680 IGKV2D-28P01615 120 aa5.13□□□□□ -1.59
TCF4-216ENST00000562680 ERC2-IT1O76042 136 aa5.13□□□□□ -1.59
TCF4-216ENST00000562680 OXTP01178 125 aa5.11□□□□□ -1.59
TCF4-216ENST00000562680 FP248Q71RG6 208 aaPredicted RBP5.11□□□□□ -1.59
TCF4-216ENST00000562680 IGKV4-1P06312 121 aa5.11□□□□□ -1.59
TCF4-216ENST00000562680 REG3GQ6UW15 175 aa5.11□□□□□ -1.59
TCF4-216ENST00000562680 C3orf84H3BNL1 204 aa5.11□□□□□ -1.59
TCF4-216ENST00000562680 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 SPAG11AQ6PDA7 123 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 ZNF575Q86XF7 245 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 FAM30AQ9NZY2 134 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 C6orf48Q9UBA6 75 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 TRAV22A0A0B4J277 110 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 Q1T7F1 81 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 LINC01547P58512 204 aaPredicted RBP5.1□□□□□ -1.59
TCF4-216ENST00000562680 Q8N814 137 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 LINC01600Q96MT4 127 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 COL6A3P12111 3177 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 LAMA1P25391 3075 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 LINC00208Q96KT6 92 aa5.1□□□□□ -1.59
TCF4-216ENST00000562680 TEP1Q99973 2627 aaKnown RBP5.09□□□□□ -1.59
TCF4-216ENST00000562680 A0A096LNI7 61 aa5.09□□□□□ -1.59
TCF4-216ENST00000562680 XIRP2A4UGR9 3374 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms