RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 TPRXLQ17RH7 258 aa10.75□□□□□ -0.69
TPM1-224ENST00000560615 C18orf32Q8TCD1 76 aa10.75□□□□□ -0.69
TPM1-224ENST00000560615 PLEKHB2Q96CS7 222 aa10.75□□□□□ -0.69
TPM1-224ENST00000560615 A0A096LNJ9 63 aa10.74□□□□□ -0.69
TPM1-224ENST00000560615 COMMD7Q86VX2 200 aa10.74□□□□□ -0.69
TPM1-224ENST00000560615 HIGD2AQ9BW72 106 aa10.74□□□□□ -0.69
TPM1-224ENST00000560615 ZNF706Q9Y5V0 76 aaPredicted RBP10.74□□□□□ -0.69
TPM1-224ENST00000560615 C11orf86A6NJI1 115 aa10.73□□□□□ -0.69
TPM1-224ENST00000560615 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
TPM1-224ENST00000560615 CHTOPQ9Y3Y2 248 aaKnown RBP10.72□□□□□ -0.69
TPM1-224ENST00000560615 PMCHL1Q16048 86 aa10.71□□□□□ -0.69
TPM1-224ENST00000560615 C10orf91Q5T1B1 145 aa10.71□□□□□ -0.69
TPM1-224ENST00000560615 MUC2Q02817 5179 aa10.7□□□□□ -0.7
TPM1-224ENST00000560615 LINC00587B1AMM8 73 aa10.7□□□□□ -0.7
TPM1-224ENST00000560615 IFITM2Q01629 132 aa10.7□□□□□ -0.7
TPM1-224ENST00000560615 URB1-AS1Q96HZ7 61 aa10.7□□□□□ -0.7
TPM1-224ENST00000560615 S100A12P80511 92 aa10.69□□□□□ -0.7
TPM1-224ENST00000560615 A0A0U1RRA0 63 aa10.67□□□□□ -0.7
TPM1-224ENST00000560615 MEIG1Q5JSS6 88 aa10.67□□□□□ -0.7
TPM1-224ENST00000560615 C3orf22Q8N5N4 141 aa10.67□□□□□ -0.7
TPM1-224ENST00000560615 SPRR4Q96PI1 79 aa10.67□□□□□ -0.7
TPM1-224ENST00000560615 PPDPFQ9H3Y8 114 aa10.67□□□□□ -0.7
TPM1-224ENST00000560615 TRAV12-1A0A0B4J245 112 aa10.66□□□□□ -0.7
TPM1-224ENST00000560615 PRYO14603 147 aa10.66□□□□□ -0.7
TPM1-224ENST00000560615 HERV-K104P63124 156 aa10.66□□□□□ -0.7
TPM1-224ENST00000560615 NDUFA5Q16718 116 aa10.66□□□□□ -0.7
TPM1-224ENST00000560615 TMEM223A0PJW6 202 aa10.65□□□□□ -0.7
TPM1-224ENST00000560615 FP248Q71RG6 208 aaPredicted RBP10.65□□□□□ -0.7
TPM1-224ENST00000560615 BOD1L2Q8IYS8 172 aa10.65□□□□□ -0.7
TPM1-224ENST00000560615 Q8NDZ9 215 aa10.65□□□□□ -0.7
TPM1-224ENST00000560615 CHCHD1Q96BP2 118 aaKnown RBP10.65□□□□□ -0.7
TPM1-224ENST00000560615 IFI27L1Q96BM0 104 aa10.64□□□□□ -0.71
TPM1-224ENST00000560615 MAP1LC3CQ9BXW4 147 aa10.64□□□□□ -0.71
TPM1-224ENST00000560615 ETDCA0A1B0GVM5 59 aa10.63□□□□□ -0.71
TPM1-224ENST00000560615 SNAPINO95295 136 aa10.63□□□□□ -0.71
TPM1-224ENST00000560615 LINC00337Q8N6G1 96 aa10.63□□□□□ -0.71
TPM1-224ENST00000560615 SMIM13P0DJ93 91 aa10.62□□□□□ -0.71
TPM1-224ENST00000560615 APOC3P02656 99 aa10.61□□□□□ -0.71
TPM1-224ENST00000560615 SVBPQ8N300 66 aa10.61□□□□□ -0.71
TPM1-224ENST00000560615 KCNQ1DNQ9H478 68 aa10.61□□□□□ -0.71
TPM1-224ENST00000560615 MYMXA0A1B0GTQ4 84 aa10.6□□□□□ -0.71
TPM1-224ENST00000560615 MIR7-3HGQ8N6C7 128 aa10.6□□□□□ -0.71
TPM1-224ENST00000560615 NCR3O14931 201 aa10.59□□□□□ -0.71
TPM1-224ENST00000560615 SPINK1P00995 79 aa10.59□□□□□ -0.71
TPM1-224ENST00000560615 SMCR5Q8TEV8 140 aa10.59□□□□□ -0.71
TPM1-224ENST00000560615 SPRR1AP35321 89 aa10.58□□□□□ -0.72
TPM1-224ENST00000560615 LCE2AQ5TA79 106 aaPredicted RBP10.58□□□□□ -0.72
TPM1-224ENST00000560615 Q8NBF4 154 aa10.58□□□□□ -0.72
TPM1-224ENST00000560615 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
TPM1-224ENST00000560615 HSBP1O75506 76 aa10.57□□□□□ -0.72
TPM1-224ENST00000560615 KRTAP9-2Q9BYQ4 174 aa10.57□□□□□ -0.72
TPM1-224ENST00000560615 DAND5Q8N907 189 aa10.55□□□□□ -0.72
TPM1-224ENST00000560615 TRBV10-3A0A0K0K1G6 114 aa10.54□□□□□ -0.72
TPM1-224ENST00000560615 FAM19A2Q8N3H0 131 aa10.53□□□□□ -0.72
TPM1-224ENST00000560615 LINC00483Q53H64 154 aa10.52□□□□□ -0.73
TPM1-224ENST00000560615 GAGE2AQ6NT46 116 aa10.52□□□□□ -0.73
TPM1-224ENST00000560615 SSBP3-AS1Q7Z2R9 100 aa10.52□□□□□ -0.73
TPM1-224ENST00000560615 MIEN1Q9BRT3 115 aa10.52□□□□□ -0.73
TPM1-224ENST00000560615 TRBV10-2A0A0K0K1G8 114 aa10.51□□□□□ -0.73
TPM1-224ENST00000560615 KRTAP4-16G5E9R7 235 aaPredicted RBP10.51□□□□□ -0.73
TPM1-224ENST00000560615 H0Y8G0 127 aa10.51□□□□□ -0.73
TPM1-224ENST00000560615 DDTP30046 118 aa10.51□□□□□ -0.73
TPM1-224ENST00000560615 HERVK_113P61574 105 aa10.5□□□□□ -0.73
TPM1-224ENST00000560615 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
TPM1-224ENST00000560615 FAT4Q6V0I7 4981 aa10.49□□□□□ -0.73
TPM1-224ENST00000560615 LOC107984156A0A0G2JMH3 177 aa10.49□□□□□ -0.73
TPM1-224ENST00000560615 B5MCH6 92 aa10.49□□□□□ -0.73
TPM1-224ENST00000560615 LEPROTO15243 131 aa10.49□□□□□ -0.73
TPM1-224ENST00000560615 PLNP26678 52 aa10.49□□□□□ -0.73
TPM1-224ENST00000560615 ARL17AQ8IVW1 177 aa10.49□□□□□ -0.73
TPM1-224ENST00000560615 IGLV9-49A0A0B4J1Y8 123 aa10.48□□□□□ -0.73
TPM1-224ENST00000560615 LEPROTL1O95214 131 aa10.48□□□□□ -0.73
TPM1-224ENST00000560615 SEC61BP60468 96 aaKnown RBP10.48□□□□□ -0.73
TPM1-224ENST00000560615 JOSD1Q15040 202 aaPredicted RBP10.48□□□□□ -0.73
TPM1-224ENST00000560615 KRTAP13-3Q3SY46 172 aa10.48□□□□□ -0.73
TPM1-224ENST00000560615 S100A7L2Q5SY68 101 aa10.48□□□□□ -0.73
TPM1-224ENST00000560615 NMUP48645 174 aa10.47□□□□□ -0.73
TPM1-224ENST00000560615 MOBPQ13875 183 aa10.47□□□□□ -0.73
TPM1-224ENST00000560615 SPANXB1Q9NS25 103 aaPredicted RBP10.47□□□□□ -0.73
TPM1-224ENST00000560615 ASB16-AS1Q495Z4 193 aa10.46□□□□□ -0.73
TPM1-224ENST00000560615 CBY1Q9Y3M2 126 aa10.46□□□□□ -0.73
TPM1-224ENST00000560615 SLC25A20O43772 301 aa10.45□□□□□ -0.74
TPM1-224ENST00000560615 LGALS3P17931 250 aaKnown RBP10.45□□□□□ -0.74
TPM1-224ENST00000560615 YPEL4Q96NS1 127 aa10.45□□□□□ -0.74
TPM1-224ENST00000560615 HSPB8Q9UJY1 196 aa10.45□□□□□ -0.74
TPM1-224ENST00000560615 J3QQQ9 107 aa10.44□□□□□ -0.74
TPM1-224ENST00000560615 NDUFC2O95298 119 aa10.44□□□□□ -0.74
TPM1-224ENST00000560615 Q6ZRX8 168 aa10.44□□□□□ -0.74
TPM1-224ENST00000560615 MUC17Q685J3 4493 aa10.44□□□□□ -0.74
TPM1-224ENST00000560615 DPM2O94777 84 aa10.43□□□□□ -0.74
TPM1-224ENST00000560615 HINT1P49773 126 aaPredicted RBP10.42□□□□□ -0.74
TPM1-224ENST00000560615 LINC01547P58512 204 aaPredicted RBP10.42□□□□□ -0.74
TPM1-224ENST00000560615 ERC2-IT1O76042 136 aa10.41□□□□□ -0.74
TPM1-224ENST00000560615 TSPEAR-AS2P59090 65 aa10.41□□□□□ -0.74
TPM1-224ENST00000560615 TRAV23DV6A0A075B6W5 121 aa10.4□□□□□ -0.74
TPM1-224ENST00000560615 IGKCP01834 107 aa10.4□□□□□ -0.74
TPM1-224ENST00000560615 Q8N377 158 aa10.4□□□□□ -0.74
TPM1-224ENST00000560615 Q9BRP9 147 aa10.4□□□□□ -0.74
TPM1-224ENST00000560615 IGLV6-57P01721 117 aa10.39□□□□□ -0.75
TPM1-224ENST00000560615 TRGC2P03986 189 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms