RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 LINC00167Q96N53 147 aa6.6□□□□□ -1.35
SPG11-216ENST00000559347 COLCA2A8K830 154 aa6.59□□□□□ -1.35
SPG11-216ENST00000559347 ZNF861PO60384 105 aa6.59□□□□□ -1.35
SPG11-216ENST00000559347 PRR26Q8N8Z3 221 aa6.59□□□□□ -1.35
SPG11-216ENST00000559347 NKAPP1Q8N9T2 125 aa6.59□□□□□ -1.35
SPG11-216ENST00000559347 SND1-IT1Q9HBX3 110 aa6.59□□□□□ -1.35
SPG11-216ENST00000559347 LRP2P98164 4655 aa6.59□□□□□ -1.35
SPG11-216ENST00000559347 GAGE10A6NGK3 116 aa6.58□□□□□ -1.36
SPG11-216ENST00000559347 RPL37AP8A6NKH3 93 aa6.58□□□□□ -1.36
SPG11-216ENST00000559347 BCE1O60756 84 aa6.58□□□□□ -1.36
SPG11-216ENST00000559347 VPREB1P12018 145 aa6.58□□□□□ -1.36
SPG11-216ENST00000559347 IGLV1-50A0A075B6I6 118 aa6.57□□□□□ -1.36
SPG11-216ENST00000559347 H0Y8G0 127 aa6.57□□□□□ -1.36
SPG11-216ENST00000559347 SCO1O75880 301 aa6.57□□□□□ -1.36
SPG11-216ENST00000559347 LEPROTL1O95214 131 aa6.57□□□□□ -1.36
SPG11-216ENST00000559347 IGKV2-28A0A075B6P5 120 aa6.56□□□□□ -1.36
SPG11-216ENST00000559347 IGKV2D-28P01615 120 aa6.56□□□□□ -1.36
SPG11-216ENST00000559347 Q8NDZ9 215 aa6.56□□□□□ -1.36
SPG11-216ENST00000559347 RPL28P46779 137 aaKnown RBP6.55□□□□□ -1.36
SPG11-216ENST00000559347 KRTAP13-1Q8IUC0 172 aa6.55□□□□□ -1.36
SPG11-216ENST00000559347 LINC00158P58513 81 aa6.54□□□□□ -1.36
SPG11-216ENST00000559347 A0A0U1RRA0 63 aa6.53□□□□□ -1.36
SPG11-216ENST00000559347 SMIM13P0DJ93 91 aa6.53□□□□□ -1.36
SPG11-216ENST00000559347 FABP4P15090 132 aa6.53□□□□□ -1.36
SPG11-216ENST00000559347 PLNP26678 52 aa6.53□□□□□ -1.36
SPG11-216ENST00000559347 RPL13AP40429 203 aaKnown RBP6.53□□□□□ -1.36
SPG11-216ENST00000559347 TSPEAR-AS2P59090 65 aa6.53□□□□□ -1.36
SPG11-216ENST00000559347 RPL24P83731 157 aaKnown RBP6.53□□□□□ -1.36
SPG11-216ENST00000559347 HSPB8Q9UJY1 196 aa6.53□□□□□ -1.36
SPG11-216ENST00000559347 UBE2AP49459 152 aa6.52□□□□□ -1.37
SPG11-216ENST00000559347 HERV-K104P63124 156 aa6.52□□□□□ -1.37
SPG11-216ENST00000559347 MEIG1Q5JSS6 88 aa6.52□□□□□ -1.37
SPG11-216ENST00000559347 TMEM126AQ9H061 195 aa6.52□□□□□ -1.37
SPG11-216ENST00000559347 NDUFA12Q9UI09 145 aa6.52□□□□□ -1.37
SPG11-216ENST00000559347 TMEM238C9JI98 176 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST1H2BKO60814 126 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 DPM2O94777 84 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST1H2BJP06899 126 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST1H2BOP23527 126 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST1H2BBP33778 126 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST1H2BDP58876 126 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST1H2BCP62807 126 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST2H2BEQ16778 126 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST1H2BHQ93079 126 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST1H2BNQ99877 126 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 HIST1H2BMQ99879 126 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 PMCHL2Q9BQD1 86 aa6.51□□□□□ -1.37
SPG11-216ENST00000559347 A0A087X002 238 aa6.5□□□□□ -1.37
SPG11-216ENST00000559347 MYMXA0A1B0GTQ4 84 aa6.5□□□□□ -1.37
SPG11-216ENST00000559347 M0R378 163 aa6.5□□□□□ -1.37
SPG11-216ENST00000559347 LEPROTO15243 131 aa6.5□□□□□ -1.37
SPG11-216ENST00000559347 IGKCP01834 107 aa6.5□□□□□ -1.37
SPG11-216ENST00000559347 PRLHP81277 87 aa6.5□□□□□ -1.37
SPG11-216ENST00000559347 MIR7-3HGQ8N6C7 128 aa6.5□□□□□ -1.37
SPG11-216ENST00000559347 FAM19A1Q7Z5A9 133 aa6.49□□□□□ -1.37
SPG11-216ENST00000559347 PLEKHB2Q96CS7 222 aa6.49□□□□□ -1.37
SPG11-216ENST00000559347 MAP1LC3CQ9BXW4 147 aa6.49□□□□□ -1.37
SPG11-216ENST00000559347 LPAP08519 4548 aa6.49□□□□□ -1.37
SPG11-216ENST00000559347 J3QQQ9 107 aa6.48□□□□□ -1.37
SPG11-216ENST00000559347 ATP6V1G1O75348 118 aa6.48□□□□□ -1.37
SPG11-216ENST00000559347 HERVK_113P61574 105 aa6.48□□□□□ -1.37
SPG11-216ENST00000559347 BOD1L2Q8IYS8 172 aa6.48□□□□□ -1.37
SPG11-216ENST00000559347 LINC00587B1AMM8 73 aa6.47□□□□□ -1.37
SPG11-216ENST00000559347 NCR3O14931 201 aa6.47□□□□□ -1.37
SPG11-216ENST00000559347 NMUP48645 174 aa6.47□□□□□ -1.37
SPG11-216ENST00000559347 PRYO14603 147 aa6.46□□□□□ -1.38
SPG11-216ENST00000559347 CRYGAP11844 174 aa6.46□□□□□ -1.38
SPG11-216ENST00000559347 DAND5Q8N907 189 aa6.46□□□□□ -1.38
SPG11-216ENST00000559347 ANAPC11Q9NYG5 84 aa6.46□□□□□ -1.38
SPG11-216ENST00000559347 RNF213Q63HN8 5207 aa6.46□□□□□ -1.38
SPG11-216ENST00000559347 IGKV2D-26A0A0A0MRZ7 120 aa6.45□□□□□ -1.38
SPG11-216ENST00000559347 LOC107984156A0A0G2JMH3 177 aa6.45□□□□□ -1.38
SPG11-216ENST00000559347 SYS1-DBNDD2H3BUS1 97 aa6.45□□□□□ -1.38
SPG11-216ENST00000559347 LGALS3P17931 250 aaKnown RBP6.45□□□□□ -1.38
SPG11-216ENST00000559347 FAM229BQ4G0N7 80 aa6.45□□□□□ -1.38
SPG11-216ENST00000559347 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
SPG11-216ENST00000559347 ARL17AQ8IVW1 177 aa6.45□□□□□ -1.38
SPG11-216ENST00000559347 E9PLD3 99 aa6.44□□□□□ -1.38
SPG11-216ENST00000559347 TYMSOSQ8TAI1 123 aa6.44□□□□□ -1.38
SPG11-216ENST00000559347 SPRR1AP35321 89 aa6.43□□□□□ -1.38
SPG11-216ENST00000559347 CTAG1AP78358 180 aa6.43□□□□□ -1.38
SPG11-216ENST00000559347 LINC01545Q5VT33 79 aa6.43□□□□□ -1.38
SPG11-216ENST00000559347 HIGD2AQ9BW72 106 aa6.43□□□□□ -1.38
SPG11-216ENST00000559347 KCNQ1DNQ9H478 68 aa6.43□□□□□ -1.38
SPG11-216ENST00000559347 A0A0J9YXY3 114 aa6.42□□□□□ -1.38
SPG11-216ENST00000559347 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
SPG11-216ENST00000559347 COA6Q5JTJ3 125 aaKnown RBP6.42□□□□□ -1.38
SPG11-216ENST00000559347 LINC00337Q8N6G1 96 aa6.42□□□□□ -1.38
SPG11-216ENST00000559347 TRBV10-2A0A0K0K1G8 114 aa6.41□□□□□ -1.38
SPG11-216ENST00000559347 KRTAP4-16G5E9R7 235 aaPredicted RBP6.41□□□□□ -1.38
SPG11-216ENST00000559347 C3orf79P0CE67 100 aa6.41□□□□□ -1.38
SPG11-216ENST00000559347 PET117Q6UWS5 81 aa6.41□□□□□ -1.38
SPG11-216ENST00000559347 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
SPG11-216ENST00000559347 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
SPG11-216ENST00000559347 SPANXB1Q9NS25 103 aaPredicted RBP6.41□□□□□ -1.38
SPG11-216ENST00000559347 NDUFC2O95298 119 aa6.4□□□□□ -1.38
SPG11-216ENST00000559347 SOSTDC1Q6X4U4 206 aa6.4□□□□□ -1.38
SPG11-216ENST00000559347 ETDCA0A1B0GVM5 59 aa6.39□□□□□ -1.39
SPG11-216ENST00000559347 TSPAN13O95857 204 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms