RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 FAM218AQ96MZ4 157 aa11.33□□□□□ -0.6
PBX1-215ENST00000559240 F8WEM9 126 aa11.33□□□□□ -0.6
PBX1-215ENST00000559240 COX7A2LO14548 114 aa11.33□□□□□ -0.6
PBX1-215ENST00000559240 C11orf45Q8TAV5 145 aa11.33□□□□□ -0.6
PBX1-215ENST00000559240 IGHV3-30-3P0DP02 117 aa11.32□□□□□ -0.6
PBX1-215ENST00000559240 HUWE1Q7Z6Z7 4374 aaKnown RBP11.32□□□□□ -0.6
PBX1-215ENST00000559240 PAX4O43316 350 aa11.32□□□□□ -0.6
PBX1-215ENST00000559240 MIAQ16674 131 aa11.31□□□□□ -0.6
PBX1-215ENST00000559240 DNAH9Q9NYC9 4486 aa11.31□□□□□ -0.6
PBX1-215ENST00000559240 CD164Q04900 197 aa11.3□□□□□ -0.6
PBX1-215ENST00000559240 VSIG2Q96IQ7 327 aa11.3□□□□□ -0.6
PBX1-215ENST00000559240 Q9UF83 564 aa11.29□□□□□ -0.6
PBX1-215ENST00000559240 NDUFA12Q9UI09 145 aa11.29□□□□□ -0.6
PBX1-215ENST00000559240 TMEM141Q96I45 108 aa11.28□□□□□ -0.6
PBX1-215ENST00000559240 Q6ZTC4 211 aa11.28□□□□□ -0.6
PBX1-215ENST00000559240 NBEAL2Q6ZNJ1 2754 aa11.28□□□□□ -0.6
PBX1-215ENST00000559240 TRAV10A0A0B4J240 114 aa11.27□□□□□ -0.6
PBX1-215ENST00000559240 ZNF625Q96I27 306 aaPredicted RBP11.27□□□□□ -0.6
PBX1-215ENST00000559240 ENHOQ6UWT2 76 aa11.27□□□□□ -0.61
PBX1-215ENST00000559240 TIMM17AQ99595 171 aa11.26□□□□□ -0.61
PBX1-215ENST00000559240 GYPEP15421 78 aa11.26□□□□□ -0.61
PBX1-215ENST00000559240 NANOS2P60321 138 aaKnown RBP11.26□□□□□ -0.61
PBX1-215ENST00000559240 A0A087WZ39 114 aa11.25□□□□□ -0.61
PBX1-215ENST00000559240 LOC100131303A0A0U1RQF7 123 aa11.24□□□□□ -0.61
PBX1-215ENST00000559240 MRPS36P82909 103 aaKnown RBP11.24□□□□□ -0.61
PBX1-215ENST00000559240 TENM3Q9P273 2699 aa11.24□□□□□ -0.61
PBX1-215ENST00000559240 MEGF8Q7Z7M0 2845 aa11.23□□□□□ -0.61
PBX1-215ENST00000559240 DEFB131BA0A096LNP1 70 aa11.23□□□□□ -0.61
PBX1-215ENST00000559240 C20orf203Q8NBC4 194 aa11.23□□□□□ -0.61
PBX1-215ENST00000559240 CHCHD7Q9BUK0 85 aa11.23□□□□□ -0.61
PBX1-215ENST00000559240 NCR3O14931 201 aa11.22□□□□□ -0.61
PBX1-215ENST00000559240 RNASE13Q5GAN3 156 aaKnown RBP11.22□□□□□ -0.61
PBX1-215ENST00000559240 NTM-AS1Q6ZSK4 140 aa11.21□□□□□ -0.61
PBX1-215ENST00000559240 A0A096LPF7 62 aa11.21□□□□□ -0.62
PBX1-215ENST00000559240 PRR15Q8IV56 129 aa11.2□□□□□ -0.62
PBX1-215ENST00000559240 TRBV6-8A0A0A6YYG3 113 aa11.19□□□□□ -0.62
PBX1-215ENST00000559240 MRPL55Q7Z7F7 128 aaKnown RBP11.19□□□□□ -0.62
PBX1-215ENST00000559240 COPS9Q8WXC6 57 aa11.19□□□□□ -0.62
PBX1-215ENST00000559240 HTN3P15516 51 aa11.19□□□□□ -0.62
PBX1-215ENST00000559240 Q6ZRU5 148 aa11.18□□□□□ -0.62
PBX1-215ENST00000559240 IGHV3-38A0A0C4DH36 116 aa11.18□□□□□ -0.62
PBX1-215ENST00000559240 KLKP1Q107X0 134 aa11.18□□□□□ -0.62
PBX1-215ENST00000559240 C6orf223Q8N319 242 aa11.17□□□□□ -0.62
PBX1-215ENST00000559240 PRKDCP78527 4128 aaKnown RBP11.16□□□□□ -0.62
PBX1-215ENST00000559240 LELP1Q5T871 98 aa11.15□□□□□ -0.62
PBX1-215ENST00000559240 TRAV7A0A075B6U4 112 aa11.15□□□□□ -0.62
PBX1-215ENST00000559240 IGHV1-58A0A0C4DH39 117 aa11.15□□□□□ -0.62
PBX1-215ENST00000559240 LINC00308Q8TCZ7 52 aa11.14□□□□□ -0.63
PBX1-215ENST00000559240 A0A087WYN8 130 aa11.14□□□□□ -0.63
PBX1-215ENST00000559240 COL7A1Q02388 2944 aa11.14□□□□□ -0.63
PBX1-215ENST00000559240 IGLV4-3A0A075B6K6 122 aa11.13□□□□□ -0.63
PBX1-215ENST00000559240 A0A1B0GUV1 79 aa11.12□□□□□ -0.63
PBX1-215ENST00000559240 NUPR2A6NF83 97 aa11.12□□□□□ -0.63
PBX1-215ENST00000559240 DYNC2H1Q8NCM8 4307 aaKnown RBP11.12□□□□□ -0.63
PBX1-215ENST00000559240 LRCOL1A6NCL2 159 aa11.12□□□□□ -0.63
PBX1-215ENST00000559240 SLPIP03973 132 aa11.12□□□□□ -0.63
PBX1-215ENST00000559240 FAM104AQ969W3 186 aa11.12□□□□□ -0.63
PBX1-215ENST00000559240 RBM12B-AS1Q9P1G2 102 aa11.12□□□□□ -0.63
PBX1-215ENST00000559240 TRAV13-2A0A0B4J235 113 aa11.1□□□□□ -0.63
PBX1-215ENST00000559240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.1□□□□□ -0.63
PBX1-215ENST00000559240 IGKV2-29A2NJV5 120 aaPredicted RBP11.1□□□□□ -0.63
PBX1-215ENST00000559240 UBE2L6O14933 153 aa11.09□□□□□ -0.63
PBX1-215ENST00000559240 FAM19A3Q7Z5A8 133 aa11.08□□□□□ -0.64
PBX1-215ENST00000559240 MIR7-3HGQ8N6C7 128 aa11.07□□□□□ -0.64
PBX1-215ENST00000559240 APLNQ9ULZ1 77 aa11.07□□□□□ -0.64
PBX1-215ENST00000559240 CDC42SE2Q9NRR3 84 aa11.07□□□□□ -0.64
PBX1-215ENST00000559240 ESRGQ1W209 222 aa11.06□□□□□ -0.64
PBX1-215ENST00000559240 A8MU10 97 aa11.06□□□□□ -0.64
PBX1-215ENST00000559240 DNAH7Q8WXX0 4024 aa11.05□□□□□ -0.64
PBX1-215ENST00000559240 FBN3Q75N90 2809 aa11.05□□□□□ -0.64
PBX1-215ENST00000559240 OBSCN-AS1Q96MR7 158 aa11.05□□□□□ -0.64
PBX1-215ENST00000559240 LECT2O14960 151 aa11.05□□□□□ -0.64
PBX1-215ENST00000559240 PSPHP1O15172 72 aa11.04□□□□□ -0.64
PBX1-215ENST00000559240 Q9H8V8 135 aa11.04□□□□□ -0.64
PBX1-215ENST00000559240 DGAT2L7PQ6IED9 249 aa11.03□□□□□ -0.64
PBX1-215ENST00000559240 STAB2Q8WWQ8 2551 aa11.03□□□□□ -0.64
PBX1-215ENST00000559240 ATP5EP2Q5VTU8 51 aa11.02□□□□□ -0.64
PBX1-215ENST00000559240 IBA57-AS1B1ANH7 110 aa11.02□□□□□ -0.65
PBX1-215ENST00000559240 CCL18P55774 89 aa11.02□□□□□ -0.65
PBX1-215ENST00000559240 WWC2-AS2Q96NR7 200 aa11.02□□□□□ -0.65
PBX1-215ENST00000559240 LINC01556Q5JQF7 62 aa11.01□□□□□ -0.65
PBX1-215ENST00000559240 H3BS24 57 aa11.01□□□□□ -0.65
PBX1-215ENST00000559240 DNAH10OSP0CZ25 163 aa11.01□□□□□ -0.65
PBX1-215ENST00000559240 LINC00588Q9Y4M8 146 aa11.01□□□□□ -0.65
PBX1-215ENST00000559240 ATP5EP56381 51 aaPredicted RBP11□□□□□ -0.65
PBX1-215ENST00000559240 IGLV4-60A0A075B6I1 120 aa11□□□□□ -0.65
PBX1-215ENST00000559240 CDKN2A-AS1Q9UH64 79 aa11□□□□□ -0.65
PBX1-215ENST00000559240 MUC7Q8TAX7 377 aa10.99□□□□□ -0.65
PBX1-215ENST00000559240 PRR34Q9NV39 138 aa10.99□□□□□ -0.65
PBX1-215ENST00000559240 UBL5Q9BZL1 73 aa10.99□□□□□ -0.65
PBX1-215ENST00000559240 NDUFA1O15239 70 aa10.99□□□□□ -0.65
PBX1-215ENST00000559240 NDUFC1O43677 76 aa10.99□□□□□ -0.65
PBX1-215ENST00000559240 IGLV5-45A0A087WSX0 123 aa10.98□□□□□ -0.65
PBX1-215ENST00000559240 HAMPP81172 84 aa10.97□□□□□ -0.65
PBX1-215ENST00000559240 WFDC10BQ8IUB3 73 aa10.97□□□□□ -0.65
PBX1-215ENST00000559240 LINC00337Q8N6G1 96 aa10.97□□□□□ -0.65
PBX1-215ENST00000559240 SMIM11BQ8TCY0 68 aa10.96□□□□□ -0.65
PBX1-215ENST00000559240 CRPP02741 224 aa10.96□□□□□ -0.66
PBX1-215ENST00000559240 LAMTOR3Q9UHA4 124 aa10.96□□□□□ -0.66
PBX1-215ENST00000559240 TRBV7-4A0A0J9YYF1 115 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms