RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 LINC00528Q8N1L1 170 aa11□□□□□ -0.65
TPM1-214ENST00000558544 Q8N1X5 172 aa11□□□□□ -0.65
TPM1-214ENST00000558544 VPS13BQ7Z7G8 4022 aa10.99□□□□□ -0.65
TPM1-214ENST00000558544 MYMXA0A1B0GTQ4 84 aa10.99□□□□□ -0.65
TPM1-214ENST00000558544 LINC00587B1AMM8 73 aa10.98□□□□□ -0.65
TPM1-214ENST00000558544 DLEU1O43261 78 aa10.98□□□□□ -0.65
TPM1-214ENST00000558544 HERV-K104P63124 156 aa10.98□□□□□ -0.65
TPM1-214ENST00000558544 MEIG1Q5JSS6 88 aa10.98□□□□□ -0.65
TPM1-214ENST00000558544 A0A0U1RRA0 63 aa10.97□□□□□ -0.65
TPM1-214ENST00000558544 COX17Q14061 63 aa10.97□□□□□ -0.65
TPM1-214ENST00000558544 Q5VSD8 79 aa10.97□□□□□ -0.65
TPM1-214ENST00000558544 C2orf91Q6ZV80 131 aa10.97□□□□□ -0.65
TPM1-214ENST00000558544 FAM19A5Q7Z5A7 132 aaPredicted RBP10.97□□□□□ -0.65
TPM1-214ENST00000558544 SMIM13P0DJ93 91 aa10.96□□□□□ -0.65
TPM1-214ENST00000558544 HNRNPA3P51991 378 aaKnown RBP10.96□□□□□ -0.65
TPM1-214ENST00000558544 EPM2AB3EWF7 344 aa10.95□□□□□ -0.66
TPM1-214ENST00000558544 LINC00158P58513 81 aa10.95□□□□□ -0.66
TPM1-214ENST00000558544 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
TPM1-214ENST00000558544 KRTAP7-1Q8IUC3 87 aa10.94□□□□□ -0.66
TPM1-214ENST00000558544 SERTAD4-AS1Q5TG53 156 aa10.93□□□□□ -0.66
TPM1-214ENST00000558544 SND1-IT1Q9HBX3 110 aa10.93□□□□□ -0.66
TPM1-214ENST00000558544 ZNF815PA8K554 130 aa10.92□□□□□ -0.66
TPM1-214ENST00000558544 PHF5AQ7RTV0 110 aaKnown RBP10.92□□□□□ -0.66
TPM1-214ENST00000558544 C7orf33Q8WU49 177 aa10.92□□□□□ -0.66
TPM1-214ENST00000558544 KRTAP4-5Q9BYR2 181 aa10.92□□□□□ -0.66
TPM1-214ENST00000558544 M0QXV9 152 aa10.91□□□□□ -0.66
TPM1-214ENST00000558544 CTAG1AP78358 180 aa10.91□□□□□ -0.66
TPM1-214ENST00000558544 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
TPM1-214ENST00000558544 A0A0J9YXY3 114 aa10.9□□□□□ -0.67
TPM1-214ENST00000558544 RPL37AP61513 92 aaKnown RBP10.9□□□□□ -0.67
TPM1-214ENST00000558544 ABCA13Q86UQ4 5058 aa10.89□□□□□ -0.67
TPM1-214ENST00000558544 PLA2G1BP04054 148 aaKnown RBP10.89□□□□□ -0.67
TPM1-214ENST00000558544 DAND5Q8N907 189 aa10.89□□□□□ -0.67
TPM1-214ENST00000558544 HIGD1BQ9P298 99 aa10.89□□□□□ -0.67
TPM1-214ENST00000558544 SRRM2Q9UQ35 2752 aaKnown RBP10.88□□□□□ -0.67
TPM1-214ENST00000558544 PLA2G2DQ9UNK4 145 aa10.88□□□□□ -0.67
TPM1-214ENST00000558544 C22orf24Q9Y442 160 aa10.88□□□□□ -0.67
TPM1-214ENST00000558544 KRTAP10-4P60372 401 aaPredicted RBP10.85□□□□□ -0.67
TPM1-214ENST00000558544 Q8NDZ9 215 aa10.85□□□□□ -0.67
TPM1-214ENST00000558544 PKHD1L1Q86WI1 4243 aa10.85□□□□□ -0.67
TPM1-214ENST00000558544 IGLV5-37A0A075B6J1 123 aa10.84□□□□□ -0.67
TPM1-214ENST00000558544 VPREB1P12018 145 aa10.84□□□□□ -0.67
TPM1-214ENST00000558544 UBE2BP63146 152 aa10.84□□□□□ -0.67
TPM1-214ENST00000558544 NKAPP1Q8N9T2 125 aa10.84□□□□□ -0.67
TPM1-214ENST00000558544 ADAMTSL4-AS1Q5T5F5 129 aa10.83□□□□□ -0.68
TPM1-214ENST00000558544 SCGB1D4Q6XE38 83 aa10.83□□□□□ -0.68
TPM1-214ENST00000558544 MRPL55Q7Z7F7 128 aaKnown RBP10.83□□□□□ -0.68
TPM1-214ENST00000558544 KRTAP11-1Q8IUC1 163 aa10.83□□□□□ -0.68
TPM1-214ENST00000558544 SNHG12Q9BXW3 62 aa10.83□□□□□ -0.68
TPM1-214ENST00000558544 NPC2P61916 151 aa10.82□□□□□ -0.68
TPM1-214ENST00000558544 PRR3P79522 188 aaKnown RBP10.82□□□□□ -0.68
TPM1-214ENST00000558544 RPL24P83731 157 aaKnown RBP10.82□□□□□ -0.68
TPM1-214ENST00000558544 HSD52Q0P140 79 aa10.82□□□□□ -0.68
TPM1-214ENST00000558544 LITAFQ99732 161 aa10.82□□□□□ -0.68
TPM1-214ENST00000558544 GAGE10A6NGK3 116 aa10.81□□□□□ -0.68
TPM1-214ENST00000558544 TIMM17BO60830 172 aa10.81□□□□□ -0.68
TPM1-214ENST00000558544 HINT1P49773 126 aaPredicted RBP10.81□□□□□ -0.68
TPM1-214ENST00000558544 LBHQ53QV2 105 aaPredicted RBP10.81□□□□□ -0.68
TPM1-214ENST00000558544 PSORS1C2Q9UIG4 136 aa10.81□□□□□ -0.68
TPM1-214ENST00000558544 LINC00167Q96N53 147 aa10.8□□□□□ -0.68
TPM1-214ENST00000558544 M0R143 59 aa10.79□□□□□ -0.68
TPM1-214ENST00000558544 BVES-AS1Q5T3Y7 98 aa10.79□□□□□ -0.68
TPM1-214ENST00000558544 SOSTDC1Q6X4U4 206 aa10.78□□□□□ -0.68
TPM1-214ENST00000558544 SPANXB1Q9NS25 103 aaPredicted RBP10.78□□□□□ -0.68
TPM1-214ENST00000558544 LOC107984156A0A0G2JMH3 177 aa10.77□□□□□ -0.68
TPM1-214ENST00000558544 RPL37AP8A6NKH3 93 aa10.77□□□□□ -0.68
TPM1-214ENST00000558544 NCR3O14931 201 aa10.77□□□□□ -0.68
TPM1-214ENST00000558544 BATFQ16520 125 aa10.77□□□□□ -0.68
TPM1-214ENST00000558544 TAL2Q16559 108 aa10.77□□□□□ -0.68
TPM1-214ENST00000558544 C1orf137Q5JT78 98 aa10.77□□□□□ -0.68
TPM1-214ENST00000558544 ARL17AQ8IVW1 177 aa10.77□□□□□ -0.68
TPM1-214ENST00000558544 HIST1H4GQ99525 98 aa10.77□□□□□ -0.68
TPM1-214ENST00000558544 TMEM238C9JI98 176 aa10.77□□□□□ -0.69
TPM1-214ENST00000558544 EIF4EBP3O60516 100 aaPredicted RBP10.77□□□□□ -0.69
TPM1-214ENST00000558544 INAFM2P0DMQ5 153 aa10.77□□□□□ -0.69
TPM1-214ENST00000558544 IGKV2-28A0A075B6P5 120 aa10.76□□□□□ -0.69
TPM1-214ENST00000558544 IGKV2D-28P01615 120 aa10.76□□□□□ -0.69
TPM1-214ENST00000558544 LINC00308Q8TCZ7 52 aa10.76□□□□□ -0.69
TPM1-214ENST00000558544 FXYD2P54710 66 aa10.75□□□□□ -0.69
TPM1-214ENST00000558544 CEND1Q8N111 149 aa10.75□□□□□ -0.69
TPM1-214ENST00000558544 SPANXDQ9BXN6 97 aa10.75□□□□□ -0.69
TPM1-214ENST00000558544 SPANXCQ9NY87 97 aa10.75□□□□□ -0.69
TPM1-214ENST00000558544 PCLOQ9Y6V0 5065 aa10.74□□□□□ -0.69
TPM1-214ENST00000558544 M0R378 163 aa10.74□□□□□ -0.69
TPM1-214ENST00000558544 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
TPM1-214ENST00000558544 IGLV1-50A0A075B6I6 118 aa10.72□□□□□ -0.69
TPM1-214ENST00000558544 MYCBP2O75592 4640 aa10.71□□□□□ -0.69
TPM1-214ENST00000558544 NDUFC2O95298 119 aa10.71□□□□□ -0.69
TPM1-214ENST00000558544 FLG2Q5D862 2391 aaPredicted RBP10.7□□□□□ -0.7
TPM1-214ENST00000558544 IGLV7-43P04211 117 aa10.69□□□□□ -0.7
TPM1-214ENST00000558544 Q6ZVH6 145 aa10.69□□□□□ -0.7
TPM1-214ENST00000558544 MUSTN1Q8IVN3 82 aa10.69□□□□□ -0.7
TPM1-214ENST00000558544 TRBV10-2A0A0K0K1G8 114 aa10.68□□□□□ -0.7
TPM1-214ENST00000558544 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
TPM1-214ENST00000558544 TRBV10-3A0A0K0K1G6 114 aa10.67□□□□□ -0.7
TPM1-214ENST00000558544 IFITM1P13164 125 aa10.67□□□□□ -0.7
TPM1-214ENST00000558544 BCE1O60756 84 aa10.66□□□□□ -0.7
TPM1-214ENST00000558544 COL5A1-AS1Q5SY13 56 aa10.66□□□□□ -0.7
TPM1-214ENST00000558544 REG3GQ6UW15 175 aa10.66□□□□□ -0.7
TPM1-214ENST00000558544 COPS9Q8WXC6 57 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms