RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PLA2G2DQ9UNK4 145 aa7.63□□□□□ -1.19
SMAD3-205ENST00000558428 DMBT1Q9UGM3 2413 aaPredicted RBP7.62□□□□□ -1.19
SMAD3-205ENST00000558428 SMIM13P0DJ93 91 aa7.62□□□□□ -1.19
SMAD3-205ENST00000558428 LGALS3P17931 250 aaKnown RBP7.62□□□□□ -1.19
SMAD3-205ENST00000558428 MRPL55Q7Z7F7 128 aaKnown RBP7.62□□□□□ -1.19
SMAD3-205ENST00000558428 TP73-AS1Q9UF72 201 aa7.62□□□□□ -1.19
SMAD3-205ENST00000558428 S100A6P06703 90 aa7.61□□□□□ -1.19
SMAD3-205ENST00000558428 NKAPP1Q8N9T2 125 aa7.61□□□□□ -1.19
SMAD3-205ENST00000558428 HERC1Q15751 4861 aa7.6□□□□□ -1.19
SMAD3-205ENST00000558428 IGLV5-37A0A075B6J1 123 aa7.6□□□□□ -1.19
SMAD3-205ENST00000558428 C20orf202A1L168 122 aa7.6□□□□□ -1.19
SMAD3-205ENST00000558428 KRTAP29-1A8MX34 341 aaPredicted RBP7.6□□□□□ -1.19
SMAD3-205ENST00000558428 LINC00587B1AMM8 73 aa7.6□□□□□ -1.19
SMAD3-205ENST00000558428 E9PLD3 99 aa7.6□□□□□ -1.19
SMAD3-205ENST00000558428 NMUP48645 174 aa7.6□□□□□ -1.19
SMAD3-205ENST00000558428 GAGE10A6NGK3 116 aa7.59□□□□□ -1.19
SMAD3-205ENST00000558428 J3QL48 77 aa7.59□□□□□ -1.19
SMAD3-205ENST00000558428 OXTP01178 125 aa7.59□□□□□ -1.19
SMAD3-205ENST00000558428 S100A2P29034 98 aa7.59□□□□□ -1.19
SMAD3-205ENST00000558428 RPL24P83731 157 aaKnown RBP7.59□□□□□ -1.19
SMAD3-205ENST00000558428 SPINK6Q6UWN8 80 aa7.59□□□□□ -1.19
SMAD3-205ENST00000558428 HIST3H2BBQ8N257 126 aa7.59□□□□□ -1.19
SMAD3-205ENST00000558428 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
SMAD3-205ENST00000558428 RPL37AP8A6NKH3 93 aa7.58□□□□□ -1.2
SMAD3-205ENST00000558428 IGLV7-43P04211 117 aa7.58□□□□□ -1.2
SMAD3-205ENST00000558428 VPREB1P12018 145 aa7.58□□□□□ -1.2
SMAD3-205ENST00000558428 SRSF9Q13242 221 aaKnown RBP eCLIP7.58□□□□□ -1.2
SMAD3-205ENST00000558428 MIR7-3HGQ8N6C7 128 aa7.58□□□□□ -1.2
SMAD3-205ENST00000558428 HIST1H2BLQ99880 126 aa7.57□□□□□ -1.2
SMAD3-205ENST00000558428 Q8NDZ9 215 aa7.56□□□□□ -1.2
SMAD3-205ENST00000558428 SNRPEP62304 92 aaKnown RBP7.55□□□□□ -1.2
SMAD3-205ENST00000558428 BOD1L2Q8IYS8 172 aa7.55□□□□□ -1.2
SMAD3-205ENST00000558428 ATOH7Q8N100 152 aa7.55□□□□□ -1.2
SMAD3-205ENST00000558428 DAND5Q8N907 189 aa7.55□□□□□ -1.2
SMAD3-205ENST00000558428 IGKV2-28A0A075B6P5 120 aa7.54□□□□□ -1.2
SMAD3-205ENST00000558428 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
SMAD3-205ENST00000558428 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
SMAD3-205ENST00000558428 IGKV2D-28P01615 120 aa7.54□□□□□ -1.2
SMAD3-205ENST00000558428 AKR1D1P51857 326 aa7.54□□□□□ -1.2
SMAD3-205ENST00000558428 REG3GQ6UW15 175 aa7.54□□□□□ -1.2
SMAD3-205ENST00000558428 ZNF815PA8K554 130 aa7.53□□□□□ -1.2
SMAD3-205ENST00000558428 DIRC1Q969H9 104 aa7.53□□□□□ -1.2
SMAD3-205ENST00000558428 TNXBP22105 4242 aa7.53□□□□□ -1.2
SMAD3-205ENST00000558428 IGLV1-50A0A075B6I6 118 aa7.52□□□□□ -1.21
SMAD3-205ENST00000558428 BCE1O60756 84 aa7.52□□□□□ -1.21
SMAD3-205ENST00000558428 TTTY13Q9BZ97 58 aa7.52□□□□□ -1.21
SMAD3-205ENST00000558428 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
SMAD3-205ENST00000558428 H0Y9J4 135 aa7.51□□□□□ -1.21
SMAD3-205ENST00000558428 M0R378 163 aa7.51□□□□□ -1.21
SMAD3-205ENST00000558428 NCR3O14931 201 aa7.51□□□□□ -1.21
SMAD3-205ENST00000558428 ANKRD39Q53RE8 183 aa7.51□□□□□ -1.21
SMAD3-205ENST00000558428 MIEN1Q9BRT3 115 aa7.51□□□□□ -1.21
SMAD3-205ENST00000558428 LOC107984156A0A0G2JMH3 177 aa7.5□□□□□ -1.21
SMAD3-205ENST00000558428 ZNF861PO60384 105 aa7.5□□□□□ -1.21
SMAD3-205ENST00000558428 NPC2P61916 151 aa7.5□□□□□ -1.21
SMAD3-205ENST00000558428 ADAMTSL4-AS1Q5T5F5 129 aa7.5□□□□□ -1.21
SMAD3-205ENST00000558428 ARL17AQ8IVW1 177 aa7.5□□□□□ -1.21
SMAD3-205ENST00000558428 LINC01600Q96MT4 127 aa7.5□□□□□ -1.21
SMAD3-205ENST00000558428 RPL28P46779 137 aaKnown RBP7.49□□□□□ -1.21
SMAD3-205ENST00000558428 TMEM238C9JI98 176 aa7.48□□□□□ -1.21
SMAD3-205ENST00000558428 TIMM17BO60830 172 aa7.48□□□□□ -1.21
SMAD3-205ENST00000558428 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
SMAD3-205ENST00000558428 UBE2AP49459 152 aa7.48□□□□□ -1.21
SMAD3-205ENST00000558428 TMEM126AQ9H061 195 aa7.48□□□□□ -1.21
SMAD3-205ENST00000558428 SOSTDC1Q6X4U4 206 aa7.47□□□□□ -1.21
SMAD3-205ENST00000558428 SCGB1D4Q6XE38 83 aa7.47□□□□□ -1.21
SMAD3-205ENST00000558428 LITAFQ99732 161 aa7.47□□□□□ -1.21
SMAD3-205ENST00000558428 HSBP1L1C9JCN9 74 aa7.46□□□□□ -1.22
SMAD3-205ENST00000558428 SCGB1D1O95968 90 aa7.46□□□□□ -1.22
SMAD3-205ENST00000558428 FAM19A1Q7Z5A9 133 aa7.46□□□□□ -1.22
SMAD3-205ENST00000558428 SPANXB1Q9NS25 103 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-205ENST00000558428 TRBV10-3A0A0K0K1G6 114 aa7.45□□□□□ -1.22
SMAD3-205ENST00000558428 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
SMAD3-205ENST00000558428 NDUFC2O95298 119 aa7.45□□□□□ -1.22
SMAD3-205ENST00000558428 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
SMAD3-205ENST00000558428 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
SMAD3-205ENST00000558428 LINC00308Q8TCZ7 52 aa7.45□□□□□ -1.22
SMAD3-205ENST00000558428 TRBV10-2A0A0K0K1G8 114 aa7.44□□□□□ -1.22
SMAD3-205ENST00000558428 PRYO14603 147 aa7.44□□□□□ -1.22
SMAD3-205ENST00000558428 PRLHP81277 87 aa7.44□□□□□ -1.22
SMAD3-205ENST00000558428 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
SMAD3-205ENST00000558428 DDTP30046 118 aa7.43□□□□□ -1.22
SMAD3-205ENST00000558428 S100A12P80511 92 aa7.43□□□□□ -1.22
SMAD3-205ENST00000558428 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
SMAD3-205ENST00000558428 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
SMAD3-205ENST00000558428 S100A7L2Q5SY68 101 aa7.42□□□□□ -1.22
SMAD3-205ENST00000558428 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
SMAD3-205ENST00000558428 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
SMAD3-205ENST00000558428 PRR26Q8N8Z3 221 aa7.41□□□□□ -1.22
SMAD3-205ENST00000558428 ETDCA0A1B0GVM5 59 aa7.4□□□□□ -1.22
SMAD3-205ENST00000558428 SPRR1AP35321 89 aa7.4□□□□□ -1.22
SMAD3-205ENST00000558428 LINC00337Q8N6G1 96 aa7.4□□□□□ -1.22
SMAD3-205ENST00000558428 TMA7Q9Y2S6 64 aaKnown RBP7.4□□□□□ -1.22
SMAD3-205ENST00000558428 IGLV6-57P01721 117 aa7.39□□□□□ -1.23
SMAD3-205ENST00000558428 Q6ZVH6 145 aa7.39□□□□□ -1.23
SMAD3-205ENST00000558428 COPS9Q8WXC6 57 aa7.39□□□□□ -1.23
SMAD3-205ENST00000558428 HIGD2AQ9BW72 106 aa7.39□□□□□ -1.23
SMAD3-205ENST00000558428 TRAV23DV6A0A075B6W5 121 aa7.38□□□□□ -1.23
SMAD3-205ENST00000558428 IFITM1P13164 125 aa7.38□□□□□ -1.23
SMAD3-205ENST00000558428 OR13C6PQ8NH95 151 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms