RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 F8WDY8 70 aa13.3□□□□□ -0.28
SNRPA1-205ENST00000558036 Q6ZRP5 223 aa13.3□□□□□ -0.28
SNRPA1-205ENST00000558036 NDUFC2-KCTD14E9PQ53 114 aa13.29□□□□□ -0.28
SNRPA1-205ENST00000558036 LINC00476Q8WZB0 136 aa13.29□□□□□ -0.28
SNRPA1-205ENST00000558036 Q6ZR54 194 aa13.28□□□□□ -0.28
SNRPA1-205ENST00000558036 SPCS1Q9Y6A9 102 aa13.28□□□□□ -0.28
SNRPA1-205ENST00000558036 PSMB2P49721 201 aa13.27□□□□□ -0.28
SNRPA1-205ENST00000558036 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-205ENST00000558036 C3orf84H3BNL1 204 aa13.27□□□□□ -0.29
SNRPA1-205ENST00000558036 LRCOL1A6NCL2 159 aa13.26□□□□□ -0.29
SNRPA1-205ENST00000558036 RPL18AQ02543 176 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-205ENST00000558036 ALMS1Q8TCU4 4167 aa13.25□□□□□ -0.29
SNRPA1-205ENST00000558036 HYDINQ4G0P3 5121 aa13.25□□□□□ -0.29
SNRPA1-205ENST00000558036 GAGE10A6NGK3 116 aa13.25□□□□□ -0.29
SNRPA1-205ENST00000558036 NCR3O14931 201 aa13.25□□□□□ -0.29
SNRPA1-205ENST00000558036 TRAV13-2A0A0B4J235 113 aa13.24□□□□□ -0.29
SNRPA1-205ENST00000558036 TRIAP1O43715 76 aa13.24□□□□□ -0.29
SNRPA1-205ENST00000558036 OR13C6PQ8NH95 151 aa13.24□□□□□ -0.29
SNRPA1-205ENST00000558036 K7EP34 96 aa13.23□□□□□ -0.29
SNRPA1-205ENST00000558036 UBE2V1Q13404 147 aa13.23□□□□□ -0.29
SNRPA1-205ENST00000558036 NDUFC2O95298 119 aa13.22□□□□□ -0.29
SNRPA1-205ENST00000558036 SCGB1C2P0DMR2 95 aa13.22□□□□□ -0.29
SNRPA1-205ENST00000558036 RNF151Q2KHN1 245 aa13.21□□□□□ -0.29
SNRPA1-205ENST00000558036 C9orf129Q5T035 196 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-205ENST00000558036 DNAH6Q9C0G6 4158 aa13.19□□□□□ -0.3
SNRPA1-205ENST00000558036 CNBPP62633 177 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-205ENST00000558036 C14orf177Q52M58 125 aa13.19□□□□□ -0.3
SNRPA1-205ENST00000558036 GTF2H5Q6ZYL4 71 aa13.19□□□□□ -0.3
SNRPA1-205ENST00000558036 H3BMG7 143 aa13.18□□□□□ -0.3
SNRPA1-205ENST00000558036 TLX1NBP0CAT3 122 aa13.18□□□□□ -0.3
SNRPA1-205ENST00000558036 GAGE2BQ13066 116 aa13.18□□□□□ -0.3
SNRPA1-205ENST00000558036 TCL1BO95988 128 aa13.17□□□□□ -0.3
SNRPA1-205ENST00000558036 SMIM11BQ8TCY0 68 aa13.17□□□□□ -0.3
SNRPA1-205ENST00000558036 LINC01620Q4KN68 170 aa13.16□□□□□ -0.3
SNRPA1-205ENST00000558036 C1orf134Q5TEV5 83 aa13.16□□□□□ -0.3
SNRPA1-205ENST00000558036 VPREB1P12018 145 aa13.15□□□□□ -0.3
SNRPA1-205ENST00000558036 DNAH17Q9UFH2 4485 aa13.15□□□□□ -0.3
SNRPA1-205ENST00000558036 A0A087WTM6 91 aa13.15□□□□□ -0.3
SNRPA1-205ENST00000558036 FUSP35637 526 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNRPA1-205ENST00000558036 Q8N814 137 aa13.15□□□□□ -0.3
SNRPA1-205ENST00000558036 CLEC2BQ92478 149 aa13.15□□□□□ -0.3
SNRPA1-205ENST00000558036 LOC107984640A0A0U1RRK4 108 aa13.14□□□□□ -0.31
SNRPA1-205ENST00000558036 FAM168BA1KXE4 195 aa13.14□□□□□ -0.31
SNRPA1-205ENST00000558036 S100A7L2Q5SY68 101 aa13.14□□□□□ -0.31
SNRPA1-205ENST00000558036 MTURNQ8N3F0 131 aa13.14□□□□□ -0.31
SNRPA1-205ENST00000558036 SERTAD4-AS1Q5TG53 156 aa13.13□□□□□ -0.31
SNRPA1-205ENST00000558036 LYRM7Q5U5X0 104 aa13.13□□□□□ -0.31
SNRPA1-205ENST00000558036 HECTD4Q9Y4D8 3996 aa13.13□□□□□ -0.31
SNRPA1-205ENST00000558036 SACSQ9NZJ4 4579 aa13.13□□□□□ -0.31
SNRPA1-205ENST00000558036 COX6CP09669 75 aa13.12□□□□□ -0.31
SNRPA1-205ENST00000558036 RPL28P46779 137 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-205ENST00000558036 TMEM126AQ9H061 195 aa13.12□□□□□ -0.31
SNRPA1-205ENST00000558036 FRAS1Q86XX4 4008 aa13.11□□□□□ -0.31
SNRPA1-205ENST00000558036 A0A096LNI7 61 aa13.1□□□□□ -0.31
SNRPA1-205ENST00000558036 IGKV2-24A0A0C4DH68 120 aa13.1□□□□□ -0.31
SNRPA1-205ENST00000558036 TRBV10-3A0A0K0K1G6 114 aa13.1□□□□□ -0.31
SNRPA1-205ENST00000558036 TRBV10-2A0A0K0K1G8 114 aa13.09□□□□□ -0.31
SNRPA1-205ENST00000558036 TRBV20-1A0A075B6N2 111 aa13.09□□□□□ -0.31
SNRPA1-205ENST00000558036 IGLV6-57P01721 117 aa13.09□□□□□ -0.31
SNRPA1-205ENST00000558036 KRTAP7-1Q8IUC3 87 aa13.08□□□□□ -0.32
SNRPA1-205ENST00000558036 C9orf163Q8N9P6 203 aa13.07□□□□□ -0.32
SNRPA1-205ENST00000558036 CHTF8P0CG12 524 aa13.06□□□□□ -0.32
SNRPA1-205ENST00000558036 FAM19A5Q7Z5A7 132 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-205ENST00000558036 M0R378 163 aa13.06□□□□□ -0.32
SNRPA1-205ENST00000558036 NKAPP1Q8N9T2 125 aa13.06□□□□□ -0.32
SNRPA1-205ENST00000558036 FAM218AQ96MZ4 157 aa13.06□□□□□ -0.32
SNRPA1-205ENST00000558036 C16orf90A8MZG2 172 aa13.05□□□□□ -0.32
SNRPA1-205ENST00000558036 TNP2Q05952 138 aa13.05□□□□□ -0.32
SNRPA1-205ENST00000558036 ATXN8Q156A1 80 aa13.05□□□□□ -0.32
SNRPA1-205ENST00000558036 C6orf99Q4VX62 202 aa13.04□□□□□ -0.32
SNRPA1-205ENST00000558036 LST1O00453 97 aa13.03□□□□□ -0.32
SNRPA1-205ENST00000558036 RTL8CO15255 209 aa13.03□□□□□ -0.32
SNRPA1-205ENST00000558036 SDIM1Q6ZPB5 146 aa13.02□□□□□ -0.33
SNRPA1-205ENST00000558036 C7orf33Q8WU49 177 aa13.02□□□□□ -0.33
SNRPA1-205ENST00000558036 PRO0461Q9UI25 63 aa13.02□□□□□ -0.33
SNRPA1-205ENST00000558036 PLA2G2DQ9UNK4 145 aa13.02□□□□□ -0.33
SNRPA1-205ENST00000558036 DNAH11Q96DT5 4516 aa13.02□□□□□ -0.33
SNRPA1-205ENST00000558036 FAT2Q9NYQ8 4349 aa13.02□□□□□ -0.33
SNRPA1-205ENST00000558036 TRAV23DV6A0A075B6W5 121 aa13.01□□□□□ -0.33
SNRPA1-205ENST00000558036 A0A087WYN8 130 aa13□□□□□ -0.33
SNRPA1-205ENST00000558036 C9JAW5 83 aa13□□□□□ -0.33
SNRPA1-205ENST00000558036 C22orf24Q9Y442 160 aa13□□□□□ -0.33
SNRPA1-205ENST00000558036 A0A1W2PNN7 141 aa13□□□□□ -0.33
SNRPA1-205ENST00000558036 RPL37AP8A6NKH3 93 aa13□□□□□ -0.33
SNRPA1-205ENST00000558036 PANO1I0J062 215 aa12.99□□□□□ -0.33
SNRPA1-205ENST00000558036 SMCPP49901 116 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-205ENST00000558036 IGLV5-37A0A075B6J1 123 aa12.97□□□□□ -0.33
SNRPA1-205ENST00000558036 F8W1H4 67 aa12.97□□□□□ -0.33
SNRPA1-205ENST00000558036 KMT2CQ8NEZ4 4911 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-205ENST00000558036 H0YGX0 51 aa12.96□□□□□ -0.33
SNRPA1-205ENST00000558036 ZNF73O43830 326 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-205ENST00000558036 LINC00167Q96N53 147 aa12.96□□□□□ -0.33
SNRPA1-205ENST00000558036 MRPL55Q7Z7F7 128 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-205ENST00000558036 IGLV5-52A0A0A0MRZ9 124 aa12.95□□□□□ -0.34
SNRPA1-205ENST00000558036 DNAH5Q8TE73 4624 aa12.94□□□□□ -0.34
SNRPA1-205ENST00000558036 M0QXV9 152 aa12.94□□□□□ -0.34
SNRPA1-205ENST00000558036 SLC25A20O43772 301 aa12.94□□□□□ -0.34
SNRPA1-205ENST00000558036 DIRC1Q969H9 104 aa12.94□□□□□ -0.34
SNRPA1-205ENST00000558036 LCE6AA0A183 80 aa12.93□□□□□ -0.34
SNRPA1-205ENST00000558036 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms