RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 LINC01600Q96MT4 127 aa12.05□□□□□ -0.48
HIF1A-211ENST00000557446 LINC00167Q96N53 147 aa12.05□□□□□ -0.48
HIF1A-211ENST00000557446 NDUFA12Q9UI09 145 aa12.05□□□□□ -0.48
HIF1A-211ENST00000557446 GAGE10A6NGK3 116 aa12.04□□□□□ -0.48
HIF1A-211ENST00000557446 LEPROTO15243 131 aa12.04□□□□□ -0.48
HIF1A-211ENST00000557446 TSPEAR-AS2P59090 65 aa12.04□□□□□ -0.48
HIF1A-211ENST00000557446 HERV-K104P63124 156 aa12.04□□□□□ -0.48
HIF1A-211ENST00000557446 MEIG1Q5JSS6 88 aa12.04□□□□□ -0.48
HIF1A-211ENST00000557446 RPL37AP8A6NKH3 93 aa12.03□□□□□ -0.48
HIF1A-211ENST00000557446 SYS1-DBNDD2H3BUS1 97 aa12.03□□□□□ -0.48
HIF1A-211ENST00000557446 ATP6V1G1O75348 118 aa12.03□□□□□ -0.48
HIF1A-211ENST00000557446 COA6Q5JTJ3 125 aaKnown RBP12.03□□□□□ -0.48
HIF1A-211ENST00000557446 DIRC1Q969H9 104 aa12.03□□□□□ -0.48
HIF1A-211ENST00000557446 PLEKHB2Q96CS7 222 aa12.03□□□□□ -0.48
HIF1A-211ENST00000557446 MYMXA0A1B0GTQ4 84 aa12.02□□□□□ -0.49
HIF1A-211ENST00000557446 SMIM13P0DJ93 91 aa12.02□□□□□ -0.49
HIF1A-211ENST00000557446 VPREB1P12018 145 aa12.02□□□□□ -0.49
HIF1A-211ENST00000557446 H0Y9J4 135 aa12□□□□□ -0.49
HIF1A-211ENST00000557446 RPL24P83731 157 aaKnown RBP12□□□□□ -0.49
HIF1A-211ENST00000557446 J3QQQ9 107 aa11.99□□□□□ -0.49
HIF1A-211ENST00000557446 Q8NDZ9 215 aa11.99□□□□□ -0.49
HIF1A-211ENST00000557446 LINC00587B1AMM8 73 aa11.98□□□□□ -0.49
HIF1A-211ENST00000557446 LGALS3P17931 250 aaKnown RBP11.98□□□□□ -0.49
HIF1A-211ENST00000557446 MIR7-3HGQ8N6C7 128 aa11.98□□□□□ -0.49
HIF1A-211ENST00000557446 IGKV2-28A0A075B6P5 120 aa11.97□□□□□ -0.49
HIF1A-211ENST00000557446 BCE1O60756 84 aa11.97□□□□□ -0.49
HIF1A-211ENST00000557446 IGKV2D-28P01615 120 aa11.97□□□□□ -0.49
HIF1A-211ENST00000557446 LINC01545Q5VT33 79 aa11.97□□□□□ -0.49
HIF1A-211ENST00000557446 PET117Q6UWS5 81 aa11.97□□□□□ -0.49
HIF1A-211ENST00000557446 ZNF861PO60384 105 aa11.96□□□□□ -0.49
HIF1A-211ENST00000557446 C3orf79P0CE67 100 aa11.95□□□□□ -0.5
HIF1A-211ENST00000557446 NMUP48645 174 aa11.95□□□□□ -0.5
HIF1A-211ENST00000557446 E9PLD3 99 aa11.94□□□□□ -0.5
HIF1A-211ENST00000557446 IGLV1-50A0A075B6I6 118 aa11.93□□□□□ -0.5
HIF1A-211ENST00000557446 KRTDAPP60985 99 aa11.93□□□□□ -0.5
HIF1A-211ENST00000557446 BOD1L2Q8IYS8 172 aa11.93□□□□□ -0.5
HIF1A-211ENST00000557446 RPL28P46779 137 aaKnown RBP11.92□□□□□ -0.5
HIF1A-211ENST00000557446 KRTAP10-8P60410 259 aa11.92□□□□□ -0.5
HIF1A-211ENST00000557446 DAND5Q8N907 189 aa11.91□□□□□ -0.5
HIF1A-211ENST00000557446 KRTAP1-4P0C5Y4 121 aa11.89□□□□□ -0.51
HIF1A-211ENST00000557446 UBE2AP49459 152 aa11.89□□□□□ -0.51
HIF1A-211ENST00000557446 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
HIF1A-211ENST00000557446 TMEM238C9JI98 176 aa11.88□□□□□ -0.51
HIF1A-211ENST00000557446 M0R378 163 aa11.88□□□□□ -0.51
HIF1A-211ENST00000557446 NCR3O14931 201 aa11.88□□□□□ -0.51
HIF1A-211ENST00000557446 C20orf202A1L168 122 aa11.87□□□□□ -0.51
HIF1A-211ENST00000557446 PRR26Q8N8Z3 221 aa11.87□□□□□ -0.51
HIF1A-211ENST00000557446 A0A0J9YXY3 114 aa11.86□□□□□ -0.51
HIF1A-211ENST00000557446 KRTAP13-1Q8IUC0 172 aa11.86□□□□□ -0.51
HIF1A-211ENST00000557446 TNXBP22105 4242 aa11.86□□□□□ -0.51
HIF1A-211ENST00000557446 PRLHP81277 87 aa11.85□□□□□ -0.51
HIF1A-211ENST00000557446 FAM19A1Q7Z5A9 133 aa11.85□□□□□ -0.51
HIF1A-211ENST00000557446 MIEN1Q9BRT3 115 aa11.85□□□□□ -0.51
HIF1A-211ENST00000557446 IGKV2D-26A0A0A0MRZ7 120 aa11.84□□□□□ -0.51
HIF1A-211ENST00000557446 LOC107984156A0A0G2JMH3 177 aa11.84□□□□□ -0.51
HIF1A-211ENST00000557446 ARL17AQ8IVW1 177 aa11.84□□□□□ -0.51
HIF1A-211ENST00000557446 HIST3H2BBQ8N257 126 aa11.82□□□□□ -0.52
HIF1A-211ENST00000557446 ZNF815PA8K554 130 aa11.81□□□□□ -0.52
HIF1A-211ENST00000557446 S100A2P29034 98 aa11.81□□□□□ -0.52
HIF1A-211ENST00000557446 NPC2P61916 151 aa11.81□□□□□ -0.52
HIF1A-211ENST00000557446 PRYO14603 147 aa11.8□□□□□ -0.52
HIF1A-211ENST00000557446 ADAMTSL4-AS1Q5T5F5 129 aa11.8□□□□□ -0.52
HIF1A-211ENST00000557446 ATOH7Q8N100 152 aa11.8□□□□□ -0.52
HIF1A-211ENST00000557446 TTTY13Q9BZ97 58 aa11.8□□□□□ -0.52
HIF1A-211ENST00000557446 TRBV10-3A0A0K0K1G6 114 aa11.79□□□□□ -0.52
HIF1A-211ENST00000557446 S100A6P06703 90 aa11.79□□□□□ -0.52
HIF1A-211ENST00000557446 SOSTDC1Q6X4U4 206 aa11.79□□□□□ -0.52
HIF1A-211ENST00000557446 HIST1H2BLQ99880 126 aa11.79□□□□□ -0.52
HIF1A-211ENST00000557446 RPL13AP40429 203 aaKnown RBP11.78□□□□□ -0.52
HIF1A-211ENST00000557446 SPANXB1Q9NS25 103 aaPredicted RBP11.78□□□□□ -0.52
HIF1A-211ENST00000557446 TRBV10-2A0A0K0K1G8 114 aa11.77□□□□□ -0.53
HIF1A-211ENST00000557446 AKR1D1P51857 326 aa11.77□□□□□ -0.53
HIF1A-211ENST00000557446 ANKRD39Q53RE8 183 aa11.77□□□□□ -0.53
HIF1A-211ENST00000557446 LITAFQ99732 161 aa11.77□□□□□ -0.53
HIF1A-211ENST00000557446 KCNQ1DNQ9H478 68 aa11.77□□□□□ -0.53
HIF1A-211ENST00000557446 EIF4EBP3O60516 100 aaPredicted RBP11.76□□□□□ -0.53
HIF1A-211ENST00000557446 TIMM17BO60830 172 aa11.76□□□□□ -0.53
HIF1A-211ENST00000557446 NDUFC2O95298 119 aa11.76□□□□□ -0.53
HIF1A-211ENST00000557446 DDTP30046 118 aa11.75□□□□□ -0.53
HIF1A-211ENST00000557446 S100A12P80511 92 aa11.75□□□□□ -0.53
HIF1A-211ENST00000557446 SPRR1AP35321 89 aa11.74□□□□□ -0.53
HIF1A-211ENST00000557446 LINC00337Q8N6G1 96 aa11.74□□□□□ -0.53
HIF1A-211ENST00000557446 HIGD2AQ9BW72 106 aa11.74□□□□□ -0.53
HIF1A-211ENST00000557446 A0A087X002 238 aa11.73□□□□□ -0.53
HIF1A-211ENST00000557446 ETDCA0A1B0GVM5 59 aa11.72□□□□□ -0.53
HIF1A-211ENST00000557446 S100A7L2Q5SY68 101 aa11.72□□□□□ -0.53
HIF1A-211ENST00000557446 LINC00308Q8TCZ7 52 aa11.72□□□□□ -0.53
HIF1A-211ENST00000557446 ANAPC11Q9NYG5 84 aa11.72□□□□□ -0.53
HIF1A-211ENST00000557446 HMCN2Q8NDA2 5059 aa11.71□□□□□ -0.53
HIF1A-211ENST00000557446 CRYGAP11844 174 aa11.71□□□□□ -0.53
HIF1A-211ENST00000557446 SCGB1D4Q6XE38 83 aa11.71□□□□□ -0.53
HIF1A-211ENST00000557446 KRTAP4-16G5E9R7 235 aaPredicted RBP11.7□□□□□ -0.54
HIF1A-211ENST00000557446 SNRPEP62304 92 aaKnown RBP11.7□□□□□ -0.54
HIF1A-211ENST00000557446 IGLV6-57P01721 117 aa11.69□□□□□ -0.54
HIF1A-211ENST00000557446 SPANXCQ9NY87 97 aa11.69□□□□□ -0.54
HIF1A-211ENST00000557446 PCP2Q8IVA1 136 aa11.68□□□□□ -0.54
HIF1A-211ENST00000557446 FAM229BQ4G0N7 80 aa11.67□□□□□ -0.54
HIF1A-211ENST00000557446 TYMSOSQ8TAI1 123 aa11.67□□□□□ -0.54
HIF1A-211ENST00000557446 TRAV23DV6A0A075B6W5 121 aa11.66□□□□□ -0.54
HIF1A-211ENST00000557446 SPANXDQ9BXN6 97 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 694.3 ms